mRNA_D-herbacea_M_contig92.15865.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig92.15865.1
Unique NamemRNA_D-herbacea_M_contig92.15865.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig92.15865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig92contigD-herbacea_M_contig92:809552..811784 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size585
Cds size585
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935734.0965714-CDS-D-herbacea_M_contig92:809551..8100041622935734.0965714-CDS-D-herbacea_M_contig92:809551..810004Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig92 809552..810004 -
1690880679.8409884-CDS-D-herbacea_M_contig92:809551..8100041690880679.8409884-CDS-D-herbacea_M_contig92:809551..810004Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig92 809552..810004 -
1622935734.1128027-CDS-D-herbacea_M_contig92:811652..8117841622935734.1128027-CDS-D-herbacea_M_contig92:811652..811784Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig92 811653..811784 -
1690880679.8537366-CDS-D-herbacea_M_contig92:811652..8117841690880679.8537366-CDS-D-herbacea_M_contig92:811652..811784Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig92 811653..811784 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig92.15865.1prot_D-herbacea_M_contig92.15865.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig92 809552..811784 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig92.15865.1

>prot_D-herbacea_M_contig92.15865.1 ID=prot_D-herbacea_M_contig92.15865.1|Name=mRNA_D-herbacea_M_contig92.15865.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=195bp
VRAIGYNGGPLEVVRLENTTSAGMEYEAVCEAQAVLAKRTQWVEVVCEYP
NRERTKGSSSTGPVSWMTEYTPDRDKNTAYQTLAEAESAAAVLCFSSFSL
SREKEPASAGDGAASPKALPSRSPSPVQHNDQRLAQRRNTGPTKATAQQH
HAQRQTTNGGGGGGGNIGFFGIEEAHPRRPSSLTELGPKKEAVLV
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mRNA from alignment at D-herbacea_M_contig92:809552..811784-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig92.15865.1 ID=mRNA_D-herbacea_M_contig92.15865.1|Name=mRNA_D-herbacea_M_contig92.15865.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=2233bp|location=Sequence derived from alignment at D-herbacea_M_contig92:809552..811784- (Desmarestia herbacea DmunM male)
GTCAGAGCGATAGGATACAATGGGGGACCTCTGGAAGTGGTACGCCTTGA
AAACACGACGTCCGCTGGCATGGAATACGAAGCGGTCTGCGAGGCACAAG
CGGTCTTGGCAAAGAGGACCCAATGGGTCGAGGTACGATGCGATAAAAAT
AGGGGTCACAACGAGGGGGCGACAGAGAGTATTTATTAGCAAGTAAACAA
ACAACACGATAATACGGTACAGGTACTACAGTAGTCAGTTACGTGCGTAG
AGCTCTATGTAGTTGCTAATAGAGCGCTTCATATGCCCCGGAGTGATGAA
ACCACCGGCGCAAGTGAGTGTGGTATAGCGCATGAAGTATATCGATAGCG
GTGATATCATACAGCAAGACAATGCGATTGGCTATCTTGTCATCTAGACG
GAAGGGAGCGGTGGAGCGGGGGCTCCGCTGAAGAAGATACGCCGTTCCCG
TGATCGAGTCCTAGCTCCTTTAAAAATCCAACAGATAAAATCCTCTTATC
CAACTACGCAATCCTCCTACGGTAGACACATTCTTGTAACTCGTGTGCCG
CCACCGGAATCGATCGTGGAAAAGAAAAATGTAGTACCACTGTAGTTGGG
ATGCCTCGTGCCTCGCCCGTCGATTCATCCTGTCTAGTCGGACGATGGGG
TATGGTGTGGTGTGGTGTGGTGCGGGGTTGTGTTGAATTTGGGCAAGATA
TAGTAGTCTGGGTTTTCGTTAGTGGGCGAGCTTCGGCGAGTTATGCACTG
GCCCAGGGGGGCTCCGGGCGGGCTACCTTCAAGGCCTCCTATGGCCTCCG
AGATTATCTCGCTGTAAAAGGCAACGTTGTGTTCTACAACAAGATTGTTA
ATCGGCAATACAAAAAGCGGTAAAAAAAGCTTTGAACCATAAAAAGTGAA
GGTCAAAAAAGCTTAAAAAAACACGTAGAGAGAGAACCTTCATAAAAACT
TACTTCGAGTAATTAAAAAAAAAACGTGGAAATTTTGTGAGGGTTATCCT
TCGTTTCTATCCATCCGCCCGAGGATAACAATGGTTGAAAAAAAAAACGT
TGTGTGTGCCGCTGGCTGAAGAAATTCATACTCGCGCGTGTTTTTGTCGT
ACTGGAGACACAACCAATGGTACTCACCAAAACATTTCACAATGCTGTCT
CGCCGAAAGGATGCGTTTATGTATGTGTGTTCTACAAAAAACGCTCTCCA
GCCCGCCAGCCCAACCTCCGGCCGGCCGTCTGGTGTTATGTTCGCTCTCT
GCTGCTCAACCTGTTCAATCAAGTCGTGCGTATGTGTTTGTATGTGTGCG
TGTGTGTATGCATCCCTACAGCGGGAGGCGAATCGGAACCCCGATATCGA
AGCGTGGTAATTAATACCAGTACCGTTTTTGGTGCCTTTCTGGGGAAAAC
CGTCAAAACGTGTCAATAAAACGTTTTTTTTTTATTGACGCTATTTTTTT
GTCGTGTGCCATATATCACGCTCCTCCCGAGGGTGCTTTAAACAAACGAC
GGACTGAAATCTAACGTCAAACACGTCGAATTATCTACGAAAAAAAAATA
CAGACTGAATTCCATTCATCGTACCATTTATTGAGCCCCCCCCCCCCCCC
TCGAAACGGATGCGTGGTCAATGGTAAATGACTAAGGCAAGCAACAAATG
AGTACTTCCCCCTCACCCCTCCCTCATTTCGTCCGTCTGTCCGCCCCTAC
CCTCCGCCGTCTCTCCTTCCCTCTCTCCCTCACTGACACCGACACTGCGC
TATCTTCTCCCCGCCGAATCAAAAACAAAGGTGGTGTGCGAATATCCCAA
TCGCGAACGGACGAAGGGTAGCTCGAGCACCGGTCCCGTCTCCTGGATGA
CAGAGTACACCCCGGACAGAGACAAGAACACGGCCTATCAAACCCTAGCT
GAAGCCGAATCTGCTGCTGCTGTACTCTGTTTTTCTTCTTTTTCGTTGTC
GCGGGAGAAGGAACCGGCGTCCGCTGGGGATGGTGCGGCGAGTCCTAAAG
CGTTACCGTCACGGTCACCGTCACCGGTACAGCACAACGATCAACGGTTG
GCGCAGAGAAGAAACACCGGCCCAACGAAGGCGACGGCGCAACAGCATCA
TGCGCAGAGACAAACAACAAACGGTGGTGGTGGCGGTGGCGGCAACATCG
GGTTCTTTGGGATCGAGGAAGCACATCCTCGACGGCCATCGTCGCTTACC
GAACTTGGGCCCAAGAAGGAGGCCGTCTTGGTT
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Coding sequence (CDS) from alignment at D-herbacea_M_contig92:809552..811784-

>mRNA_D-herbacea_M_contig92.15865.1 ID=mRNA_D-herbacea_M_contig92.15865.1|Name=mRNA_D-herbacea_M_contig92.15865.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1170bp|location=Sequence derived from alignment at D-herbacea_M_contig92:809552..811784- (Desmarestia herbacea DmunM male)
GTCAGAGCGATAGGATACAATGGGGGACCTCTGGAAGTGGTACGCCTTGA
AAACACGACGTCCGCTGGCATGGAATACGAAGCGGTCTGCGAGGCACAAG
CGGTCTTGGCAAAGAGGACCCAATGGGTCGAGGTCAGAGCGATAGGATAC
AATGGGGGACCTCTGGAAGTGGTACGCCTTGAAAACACGACGTCCGCTGG
CATGGAATACGAAGCGGTCTGCGAGGCACAAGCGGTCTTGGCAAAGAGGA
CCCAATGGGTCGAGGTGGTGTGCGAATATCCCAATCGCGAACGGACGAAG
GGTAGCTCGAGCACCGGTCCCGTCTCCTGGATGACAGAGTACACCCCGGA
CAGAGACAAGAACACGGCCTATCAAACCCTAGCTGAAGCCGAATCTGCTG
CTGCTGTACTCTGTTTTTCTTCTTTTTCGTTGTCGCGGGAGAAGGAACCG
GCGTCCGCTGGGGATGGTGCGGCGAGTCCTAAAGCGTTACCGTCACGGTC
ACCGTCACCGGTACAGCACAACGATCAACGGTTGGCGCAGAGAAGAAACA
CCGGCCCAACGAAGGCGACGGCGCAACAGCATCATGCGCAGAGACAAACA
ACAAACGGTGGTGGTGGCGGTGGCGGCAACATCGGGTTCTTTGGGATCGA
GGAAGCACATCCTCGACGGCCATCGTCGCTTACCGAACTTGGGCCCAAGA
AGGAGGCCGTCTTGGTTGTGGTGTGCGAATATCCCAATCGCGAACGGACG
AAGGGTAGCTCGAGCACCGGTCCCGTCTCCTGGATGACAGAGTACACCCC
GGACAGAGACAAGAACACGGCCTATCAAACCCTAGCTGAAGCCGAATCTG
CTGCTGCTGTACTCTGTTTTTCTTCTTTTTCGTTGTCGCGGGAGAAGGAA
CCGGCGTCCGCTGGGGATGGTGCGGCGAGTCCTAAAGCGTTACCGTCACG
GTCACCGTCACCGGTACAGCACAACGATCAACGGTTGGCGCAGAGAAGAA
ACACCGGCCCAACGAAGGCGACGGCGCAACAGCATCATGCGCAGAGACAA
ACAACAAACGGTGGTGGTGGCGGTGGCGGCAACATCGGGTTCTTTGGGAT
CGAGGAAGCACATCCTCGACGGCCATCGTCGCTTACCGAACTTGGGCCCA
AGAAGGAGGCCGTCTTGGTT
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