mRNA_D-herbacea_F_contig100.258.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig100.258.1 vs. uniprot
Match: D7FI10_ECTSI (DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI10_ECTSI) HSP 1 Score: 827 bits (2136), Expect = 6.610e-285 Identity = 400/463 (86.39%), Postives = 428/463 (92.44%), Query Frame = 1
Query: 1 VKEIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTITYEKEMKGLDLVRREWCVLSKDTGKFVLDRVLSGESREIVVASIHDHLEALATRMRAGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIAGATSPADRARHPDDVLRSDGQLEVDVEWYLNQQIVPPVSRLCAPIEGTSMAILAEKMGLDASKFAVHNNAGGEAEQDEWAFTPTSRLRDAERFQGVEPLRMTCRACHEQADFQGVFAWDRKKPVNGPSDIQPGLVCPNSACGAYYWGAGSEAACVSTLYQRLTLAVRGHVRVYYQTLLRCDDSSCGLRTRSMGVMGVACPARGCQGRLAREYSDKALYDQLKFYETLFDVDRAQAKVSELFNLKVADLPVSSEHRQILGLVGRRIRDDVNSSGYNWIRPSLWSSVFTSHSTPRAIKAS 1389
VK+IGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDG+ITY+KEMKGLDLVRREWC LSKDTGKFVLDRVLSGE+RE VV IHDHLEALA MRAGEV VP+YVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKI GATSPA+RARHPDDVLRS G+LEVDVEWYLNQQIVPPVSRLC PIEGTSMA+LAEKMGLDASKF H NA G + D+WAFTPTS+L DAERF+GVEPL+MTCRACHEQA+FQGVF+WDRKK VNGP+D++PGL+CPNSACGAYYWGAGSEAACVSTLYQRLTLAVR H++VYYQT LRCDDSSCGL TRS GVMGVACPA+GCQGRL +EY DK LYDQLK++ETLFDVDRAQ KVSELFN K DLPVS EHRQIL LVGRRI+DDV SSGYNWIRPSLWSSVFTSH+ P AIK+S
Sbjct: 1150 VKDIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGSITYDKEMKGLDLVRREWCTLSKDTGKFVLDRVLSGEARETVVTGIHDHLEALAASMRAGEVEVPRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIEGATSPAERARHPDDVLRSGGKLEVDVEWYLNQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFTSHANAAGGDDGDDWAFTPTSKLPDAERFRGVEPLKMTCRACHEQAEFQGVFSWDRKKAVNGPADLRPGLMCPNSACGAYYWGAGSEAACVSTLYQRLTLAVRRHLKVYYQTHLRCDDSSCGLLTRSTGVMGVACPAKGCQGRLVQEYPDKTLYDQLKYFETLFDVDRAQTKVSELFNFKETDLPVSPEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVFTSHALPPAIKSS 1612
BLAST of mRNA_D-herbacea_F_contig100.258.1 vs. uniprot
Match: A0A4D9CVK1_9STRA (DNA polymerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK1_9STRA) HSP 1 Score: 531 bits (1369), Expect = 4.890e-171 Identity = 268/462 (58.01%), Postives = 336/462 (72.73%), Query Frame = 1
Query: 1 VKEIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTITYEKEMKGLDLVRREWCVLSKDTGKFVLDRVLSGESREIVVASIHDHLEALATRMRAGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIAGATSPADRARHPDDVLRSDGQLEVDVEWYLNQQIVPPVSRLCAPIEGTSMAILAEKMGLDASKFAVHNNAGGEAEQDE-WAFTPTSRLRDAERFQGVEPLRMTCRACHEQADFQGVF---------AWDRKKPVNGPSD--IQPGLVCPNSACGAYYWGAGSEAACVSTLYQRLTLAVRGHVRVYYQTLLRCDDSSCGLRTRSMGVMGVACPARGCQGRLAREYSDKALYDQLKFYETLFDVDRAQAKVSELFNLKVADLPVSSEHRQILGLVGRRIRDDVNSSGYNWIRPSLWSSV 1350
VK GN VK+ VNKLYKSLEL+LDG+FK MLLLKKKKYAAL V E +GT+TY KE+KGLDLVRR+WCVLSK+TG+FV+D++LSGE+R+ VVA+IH +LE LA RMRAGEV V QY ITKGLNKAPHEYPDAKSQPH+QVAL+MMKAGK VNVG HI YV+C+ GA + A+RA PDDV S+G+L+VDVEWYL QQI+PPV+RLC PIEGTS+A LAE++GLD S+F N G +DE W FTP R+ D+ERF E L++ C C+++ADF GV+ A + K V + ++ GL+CPN +C A YWGA + A+C + L+ R+TL VR HV+ YY L CDD+ C R+R V+ AC ARGC G + EYS+KAL+ QLKF ETLFDV RA+AK E + LP+ H ++L L+ + R V+S+ YNWIRPSLWS +
Sbjct: 1181 VKAKGNLVKQAVNKLYKSLELELDGIFKCMLLLKKKKYAALTVSETAEGTLTYAKELKGLDLVRRDWCVLSKETGRFVIDQILSGENRDAVVATIHSYLEELAKRMRAGEVDVRQYAITKGLNKAPHEYPDAKSQPHLQVALSMMKAGKPVNVGDHIEYVICEKEGAKAAAERAFLPDDVKHSEGELKVDVEWYLTQQILPPVARLCEPIEGTSVATLAERLGLDKSRFGQGGNGGSAGNEDEAWGFTPMCRMEDSERFAACEALKVRCSHCNQEADFPGVYCEALVAVAAAGESKGGVASTASGGLRSGLLCPNMSCQALYWGAPNAASCFARLFNRVTLTVRLHVKKYYDCWLLCDDTGCNRRSRQQSVVATACLARGCHGHMGMEYSEKALHTQLKFLETLFDVRRAKAKKMEAGTVP---LPLPDGHVRVLDLLHEQTRQIVSSTAYNWIRPSLWSMI 1639
BLAST of mRNA_D-herbacea_F_contig100.258.1 vs. uniprot
Match: A0A836C9W2_9STRA (DNA-directed DNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W2_9STRA) HSP 1 Score: 455 bits (1171), Expect = 8.930e-154 Identity = 238/454 (52.42%), Postives = 308/454 (67.84%), Query Frame = 1
Query: 13 GNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTITYEKEMKGLDLVRREWCVLSKDTGKFVLDRVLSGESREIVVASIHDHLEALATRMRAGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIAGATSPADRARHPDDVLRSDGQLEVDVEWYLNQQIVPPVSRLCAPIEGTSMAILAEKMGLDASKFA------VHNNAGGEAEQDEWAFTPTSRLRDAERFQGVEPLRMTCRACHEQADFQGVFAWDRKKPVNGPSDIQPGLVCPNSACGAYYWGAGSEAACVSTLYQRLTLAVRGHVRVYYQTLLRCDDSSCGLRTRSMGVMGVACPARGC-QGRLAREYSDKALYDQLKFYETLFDVDRAQAKVSELFNLKVADLPVSSEHRQILGLVGRRIRDDVNSSGYNWIRPSLWSSVF 1353
GN +KREVNKLY SLELDLDG+F++MLLLKKKKYAALVVVE+ DGTI ++E+KGLDLVRR+WC LSK+ G+ VLDR+LSG++RE VV SIH+HL ALA MRAG V + QYVITKGL+K P +YP+AK++PH+QVA+AM +AGK VNVG+HIPY++C+ +PA+RARHP+DV+RS G L DVEWYL QQ+VPP++RLC PIEGTS AI+A++MGLD ++F+ N +AE +WAFTP S + D ERF+ PLR C G S + P WG +E AC S L Q L LA+R + CDD+ CG RTR +GV G ACPA GC QGRL+ EYS+K LY+QLK +E LFD+ RAQ + + L L V H ++L L+ + + +V+SS YNW++P+LW++VF
Sbjct: 73 GNLIKREVNKLYSSLELDLDGIFQAMLLLKKKKYAALVVVENADGTIGVQREVKGLDLVRRDWCGLSKEAGQHVLDRILSGDARETVVESIHEHLRALADAMRAGAVPIGQYVITKGLSKPPQDYPNAKNEPHLQVAMAMQRAGKPVNVGNHIPYIICR--QTQTPAERARHPEDVMRSGGALVPDVEWYLAQQMVPPIARLCEPIEGTSAAIIAQQMGLDPARFSKGGXXXXXXNRDNDAE--DWAFTPVSLMSDEERFKDCMPLRARCA---------------------GSSALTPAXXXXXXXXXL--WGHRNEVACFSALVQALVLAIRAAQARAAEGWYVCDDTCCGARTRDVGVRGSACPAPGCRQGRLSPEYSEKDLYEQLKSFEALFDLKRAQKRCHDRTKLPTGQLAVPKTHERVLELLLVKAKAEVDSSDYNWVKPTLWATVF 499
BLAST of mRNA_D-herbacea_F_contig100.258.1 vs. uniprot
Match: B8LEG9_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEG9_THAPS) HSP 1 Score: 438 bits (1127), Expect = 9.760e-140 Identity = 223/465 (47.96%), Postives = 310/465 (66.67%), Query Frame = 1
Query: 1 VKEIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTITYEKEMKGLDLVRREWCVLSKDTGKFVLDRVLSGESREIVVASIHDHLEALATRMRAGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIAGATSP-------ADRARHPDDVLRSDGQLEVDVEWYLNQQIVPPVSRLCAPIEGTSMAILAEKMGLDASKFAVHNNAGGEAEQDEWA-FTPTSRLRDAERFQGVEPLRMTCRACHEQADFQGVFAWDRKKPVNGPSDIQPGLVCPNSACGAYYWGAGSEAACVSTLYQRLTLAVRGHVRVYYQTLLRCDDSSCGLRTRSMGVMGVACPARGCQGRLAREYSDKALYDQLKFYETLFDVDRA-------QAKVSELFNLKVADLPVSSEHRQILGLVGRRIRDDVNSSGYNWIRPSLWSSV 1350
V E+GNQVKREVNKLY +LEL++DGVF+SMLLLKKKKYAA+ + E P G + ++KEMKGLDLVRR+WC+ SK++GKFVLD++LSGE +E+VV++IHDHLE +A +MR+GE+ + +Y+ITKGLNK P+EYPDAKS PHV VA M+K K+V++G HIPYV+ ++ P A+RARHPD++ RS+G ++ DVEWYL QQI+PP+SRLC PIEGTS ILAEK+GLD+SK+ +N ++D+ +TP S L D ERF+ VE L +TC C+E A+F GVF R NG S G+ CPN CG WG +C++ + R+ L + ++YY L+RCDD C L TR + V C GC GR+ Y++ +L QLK++++LFD+D A Q+ ++E LK ++ + L+ ++ SGYNW+ + S+
Sbjct: 686 VLELGNQVKREVNKLYNTLELEIDGVFRSMLLLKKKKYAAVTMAEGPGGKMIFDKEMKGLDLVRRDWCIQSKESGKFVLDQILSGEEKEVVVSNIHDHLEKVAQQMRSGELPLDKYIITKGLNKHPNEYPDAKSLPHVYVAKMMLKDHKAVSIGDHIPYVITELEKEEEPSNKKTLAAERARHPDEIERSNGAMKPDVEWYLTQQILPPISRLCEPIEGTSPGILAEKLGLDSSKY--NNIVSANIDEDDIVDYTPASCLPDEERFKDVEKLVVTCSGCNESAEFPGVF---RLVKENGVSYCASGMSCPNPVCGRPNWGDADLESCIAKILNRMNLMKKEQQKLYYDGLVRCDDPMCNLETRQLSVYEGCCLKAGCNGRMKTVYTESSLQTQLKYFDSLFDIDHACKQLKKSQSSLTEKEMLK----SLNGADKDAFQLLHGVSSCSLSKSGYNWVAADFFQSL 1141
BLAST of mRNA_D-herbacea_F_contig100.258.1 vs. uniprot
Match: A0A8J9S0I2_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S0I2_PHATR) HSP 1 Score: 415 bits (1067), Expect = 1.590e-137 Identity = 201/463 (43.41%), Postives = 301/463 (65.01%), Query Frame = 1
Query: 1 VKEIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTITYEKEMKGLDLVRREWCVLSKDTGKFVLDRVLSGESREIVVASIHDHLEALATRMRAGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMC---------KIAGATSPADRARHPDDVLRSDGQLEVDVEWYLNQQIVPPVSRLCAPIEGTSMAILAEKMGLDASKFAVHNNAGGEAEQDEWA-FTPTSRLRDAERFQGVEPLRMTCRACHEQADFQGVFAWDRKKPVNGPSDIQPGLVCPNSAC-GAYYWGAGSEAACVSTLYQRLTLAVRGHVRVYYQTLLRCDDSSCGLRTRSMGVMGVACPARGCQGRLAREYSDKALYDQLKFYETLFDVDRAQAKVSELFNLKVADLPVSSEHRQILGLVGRRIRDDVNSSGYNWIRPSLWSSVFT 1356
VKE+G +VK+EVN+LY++LEL++DG+F+SMLLLKKKKYAA V E P+G + Y +E+KGLDLVRR+WC+ SKDTG++V +++LSG+ +IV+ +IH HLE LAT+MRAG + + +Y ITKGL+K P+EYPD KSQPHVQVA+ M+K + VN G HIPY++ K ++S A+RARHP+++LRS+G L+ DVEWYL QQI+PPV+RLC PIEG S +LAEK+GLDAS++ G+ + DE +TP S L D ERF+ VE + C C ++ F GV+ + + GL C N C +WG ++ C + + +++ + +R YY + +RCD+ C L TR + V+G C RGC G++ +S++++Y LK+ E+LF++D A + ++ + + I + + + S+G+NWI P+ W+ +F+
Sbjct: 81 VKELGERVKKEVNRLYRTLELEIDGIFRSMLLLKKKKYAAKTVEEGPNGEVKYGQELKGLDLVRRDWCIQSKDTGRYVTEQILSGQESDIVIENIHSHLEELATKMRAGNLPLEKYTITKGLSKHPNEYPDGKSQPHVQVAMVMLKNNRPVNTGDHIPYIITVSEEAEAEDKKPKSSSSAERARHPEEILRSNGALKPDVEWYLTQQILPPVARLCEPIEGMSQQVLAEKLGLDASRYNHAVRTSGDIDADELIDYTPASSLSDTERFKEVEKFYLHCYGCGVESQFPGVYHVVTNSQTGNQNTVS-GLHCTNPDCLRPMFWGHATQFECFARISNNISIWTQDVMRRYYSSAIRCDEPGCSLETRQLSVVGGVCLRRGCNGKMCSVFSERSVYTHLKYMESLFNIDHASTQWNKKKKKQDDSYALVKNDETIFKELHKVAMRGLESNGFNWISPAFWNGMFS 542
BLAST of mRNA_D-herbacea_F_contig100.258.1 vs. uniprot
Match: A0A7S1BTL0_9STRA (DNA polymerase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTL0_9STRA) HSP 1 Score: 418 bits (1074), Expect = 7.500e-132 Identity = 214/451 (47.45%), Postives = 301/451 (66.74%), Query Frame = 1
Query: 1 VKEIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTITYEKEMKGLDLVRREWCVLSKDTGKFVLDRVLSGESREIVVASIHDHLEALATRMRAGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIAGATSPADRARHPDDVLRSDGQLEVDVEWYLNQQIVPPVSRLCAPIEGTSMAILAEKMGLDASKFAVHNNAGGEAEQDEWAFTPTSRLRDAERFQGVEPLRMTCRACHEQADFQGVFAWDRKKPVNGPSDIQPGLVCPNSACGAYYWGAGSEAACVSTLYQRLTLAVRGHVRVYYQTLLRCDDSSCGLRTRSMGVMGVACPARGCQGRLAREYSDKALYDQLKFYETLFDVDRAQAKVSELFNLKVADLPVSSEHRQILGLVGRRIRDDVNSSGYNWIRPSLWSSVF 1353
V+E+G +VKREVNKLY++LEL++DG+++SMLLLKKKKYAALV+ + DGT + KE+KGLDLVRR+WC+ SKD+G+FV+D++LSG+ RE V+ +IH HLE LA +MR E+A+ +YVITK L+K P EYPDAKSQPHV VAL M+K + ++ G HIPYV+C + + A+RARHP+++ RS G L+VD+EWYLN QI+PP+SRL PIEGTS A +AEK+GLD+SKF H E+ +TP S D ERF+ L++TC C E +F GVF P + I GL C N AC A WG S ++ + ++ +R HV+ YY + L CDDSSCGL+T + G C +GC G L E +K L+ ++K+ E+LF D ++ E FN K + +S E R++ + +++ + + YNW+ P L+S++F
Sbjct: 707 VRELGERVKREVNKLYRTLELEIDGIYRSMLLLKKKKYAALVM--NDDGTES--KELKGLDLVRRDWCIQSKDSGRFVIDQILSGQEREQVIDNIHRHLEELAKKMRENELALDKYVITKSLSKHPKEYPDAKSQPHVLVALDMLKNNRPISTGDHIPYVICLENESKNFAERARHPEEIERSAGALKVDIEWYLNHQILPPLSRLIEPIEGTSQATIAEKLGLDSSKFIKHVPTTY-TEETLVDYTPESSRPDRERFKDATKLQITCLKCGETNEFPGVFY----TPAGDTTPIS-GLACTNPACSAPLWGDASHWNILTRVSNATSMLLREHVQKYYGSALVCDDSSCGLKTHQLSNFGSMCLQQGCNGHLVEECDEKFLFTEMKYAESLFSFDHGCKQLEEKFNKKELERYISKEDREVFSSLHELMKNILKLNAYNWVSPKLFSALF 1147
BLAST of mRNA_D-herbacea_F_contig100.258.1 vs. uniprot
Match: B7S420_PHATC (DNA polymerase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7S420_PHATC) HSP 1 Score: 415 bits (1067), Expect = 7.080e-131 Identity = 201/463 (43.41%), Postives = 301/463 (65.01%), Query Frame = 1
Query: 1 VKEIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTITYEKEMKGLDLVRREWCVLSKDTGKFVLDRVLSGESREIVVASIHDHLEALATRMRAGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMC---------KIAGATSPADRARHPDDVLRSDGQLEVDVEWYLNQQIVPPVSRLCAPIEGTSMAILAEKMGLDASKFAVHNNAGGEAEQDEWA-FTPTSRLRDAERFQGVEPLRMTCRACHEQADFQGVFAWDRKKPVNGPSDIQPGLVCPNSAC-GAYYWGAGSEAACVSTLYQRLTLAVRGHVRVYYQTLLRCDDSSCGLRTRSMGVMGVACPARGCQGRLAREYSDKALYDQLKFYETLFDVDRAQAKVSELFNLKVADLPVSSEHRQILGLVGRRIRDDVNSSGYNWIRPSLWSSVFT 1356
VKE+G +VK+EVN+LY++LEL++DG+F+SMLLLKKKKYAA V E P+G + Y +E+KGLDLVRR+WC+ SKDTG++V +++LSG+ +IV+ +IH HLE LAT+MRAG + + +Y ITKGL+K P+EYPD KSQPHVQVA+ M+K + VN G HIPY++ K ++S A+RARHP+++LRS+G L+ DVEWYL QQI+PPV+RLC PIEG S +LAEK+GLDAS++ G+ + DE +TP S L D ERF+ VE + C C ++ F GV+ + + GL C N C +WG ++ C + + +++ + +R YY + +RCD+ C L TR + V+G C RGC G++ +S++++Y LK+ E+LF++D A + ++ + + I + + + S+G+NWI P+ W+ +F+
Sbjct: 681 VKELGERVKKEVNRLYRTLELEIDGIFRSMLLLKKKKYAAKTVEEGPNGEVKYGQELKGLDLVRRDWCIQSKDTGRYVTEQILSGQESDIVIENIHSHLEELATKMRAGNLPLEKYTITKGLSKHPNEYPDGKSQPHVQVAMVMLKNNRPVNTGDHIPYIITVSEEAEAEDKKPKSSSSAERARHPEEILRSNGALKPDVEWYLTQQILPPVARLCEPIEGMSQQVLAEKLGLDASRYNHAVRTSGDIDADELIDYTPASSLSDTERFKEVEKFYLHCYGCGVESQFPGVYHVVTNSQTGNQNTVS-GLHCTNPDCLRPMFWGHATQFECFARISNNISIWTQDVMRRYYSSTIRCDEPGCSLETRQLSVVGGVCLRRGCNGKMCSVFSERSVYTHLKYMESLFNIDHASTQWNKKKKKQDDSYALVKNDETIFKELHKVAMRGLESNGFNWISPAFWNGMFS 1142
BLAST of mRNA_D-herbacea_F_contig100.258.1 vs. uniprot
Match: A0A7S2L169_9STRA (DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L169_9STRA) HSP 1 Score: 422 bits (1085), Expect = 1.040e-130 Identity = 220/467 (47.11%), Postives = 303/467 (64.88%), Query Frame = 1
Query: 1 VKEIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTITYEKEMKGLDLVRREWCVLSKDTGKFVLDRVLSGESREIVVASIHDHLEALATRMRAGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIAGATSP-------ADRARHPDDVLRSDGQLEVDVEWYLNQQIVPPVSRLCAPIEGTSMAILAEKMGLDASKFAVHNNAGGEAEQDEWA-FTPTSRLRDAERFQGVEPLRMTCRACHEQADFQGVFAWDRKKPVNGPSDIQPGLVCPNSACGAY-YWGAGSEAACVSTLYQRLTLAVRGHVRVYYQTLLRCDDSSCGLRTRSMGVMGVACPARGCQGRLAREYSDKALYDQLKFYETLFDVD-------RAQAKVSELFNLKVADLPVSSEHRQILGLVGRRIRDDVNSSGYNWIRPSLWSSVF 1353
V E+GN+VKREVN+LYK+LEL++DGVF+SMLLLKKKKYAA+ + + P G IT++KEMKGLDLVRR+WC+ SKD+GK++LD++LSG+ +E+VV +IHDHLE +A +MR+G++ + +Y ITKGLNK P++YPDAK Q HV VA M+ SV +G HIPY++ + P A+RARHPD++ RS G L+ DVEWYL QQI+PP+SRLC PIEGTS ILAEK+GLD+SK+ N+ + +D+ +TP S L D ERF+ VE MTC AC E A+F GVF K NG + +Q G CPN C WG A C + + ++ + + + YY L+RCDD CGL TR + V C GC GR+ YS+ L QLK++++LFD++ +A+A ++E LK S + + G D +N SGYNW+ + ++F
Sbjct: 1098 VLELGNRVKREVNRLYKTLELEIDGVFRSMLLLKKKKYAAVTMAKGPGGKITFDKEMKGLDLVRRDWCIQSKDSGKYILDQILSGDEKEVVVNNIHDHLEKVAEKMRSGDLPLDKYTITKGLNKHPNDYPDAKGQAHVFVAKRMLAKNISVTIGAHIPYIITESEKEDGPSSKKTLAAERARHPDEIARSKGALKPDVEWYLAQQILPPISRLCEPIEGTSPGILAEKLGLDSSKY---NSISVDINEDDIVDYTPASCLPDEERFKDVEKFVMTCAACDESAEFPGVFRLT-KDVENGMTFVQSGFRCPNPNCARPDNWGEEDVAFCGAKVLNKINMMKKEMQKKYYDGLVRCDDPMCGLETRQLSVCEGCCLKAGCNGRMKLVYSESTLQTQLKYFDSLFDIEHACKQLSKAKATITEKEVLKNLRKDDKSTFKLLHGFTS----DSLNKSGYNWVTNQFFQTLF 1556
BLAST of mRNA_D-herbacea_F_contig100.258.1 vs. uniprot
Match: K0T5T4_THAOC (DNA polymerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T5T4_THAOC) HSP 1 Score: 411 bits (1056), Expect = 2.290e-130 Identity = 213/468 (45.51%), Postives = 302/468 (64.53%), Query Frame = 1
Query: 1 VKEIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVV-EHPDGTITYEKEMKGLDLVRREWCVLSKDTGKFVLDRVLSGESREIVVASIHDHLEALATRMRAGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIAGAT-----------SPADRARHPDDVLRSDGQLEVDVEWYLNQQIVPPVSRLCAPIEGTSMAILAEKMGLDASKF-AVHNNAGGEAEQDEWAFTPTSRLRDAERFQGVEPLRMTCRACHEQADFQGVFAWDRKKPVNGPSDIQPGLVCPNSACGA-YYWGAGSEAACVSTLYQRLTLAVRGHVRVYYQTLLRCDDSSCGLRTRSMGVMGVACPARGCQGRLAREYSDKALYDQLKFYETLFDVDRAQAKVS---ELFNLKVADLPVSSEHRQILGLVGRRIRDDVNSSGYNWIRPSLWSSVF 1353
V E+GN+VKREVN+LYK+LEL++DG+F+SMLLLKKKKYAAL + + P G ++KE+KGLDLVRR+WC+ SKD+GK+V+D++LSGE RE++V++IHDHLE +A +MR+GE+++ +YVITKGLNK P+EYPD KS PHV VA M+K K+V++G HIPYV+ + A + ++RARHPD++ RS G+L+ D++WYLN QI+P +SRLC PIEGTS ILAEK+GLD+SK+ A+ N E D +TP S L D ERF+ VE + C +C +++F GVF K +G + Q G CPN +C + WG +C + + + L + R YY L RCDD C L TR + V C GC GR+ Y++ +L QLK+ ++LFD+ A+ K+ K D +S E + ++ +N SGYNW+ S + ++F
Sbjct: 550 VLELGNKVKREVNRLYKTLELEIDGIFRSMLLLKKKKYAALTITTDGPGGKFKFDKELKGLDLVRRDWCLQSKDSGKYVIDQILSGEDRELIVSNIHDHLENVAKKMRSGELSLDKYVITKGLNKHPNEYPDGKSLPHVHVAKTMLKNHKAVSIGDHIPYVITESKDAEEGGNSAANSKKNSSERARHPDEIERSSGELKPDIDWYLNNQILPTISRLCEPIEGTSPGILAEKLGLDSSKYKAISVNID---EDDIVDYTPASCLPDEERFKDVEKFNVLCSSCGTESEFPGVFRLV-KDSDSGMTFCQSGFRCPNPSCHSPNNWGEADLFSCTAKILNGMNLLKQNVQRKYYDGLTRCDDPMCDLETRQVSVYEGCCLKAGCNGRMRTVYTESSLQTQLKYLDSLFDMAHAKKKLEGSGSTITEKEVDKSISKEDKDAFAMLHGFSGHSLNKSGYNWVSGSFFQTLF 1013
BLAST of mRNA_D-herbacea_F_contig100.258.1 vs. uniprot
Match: A0A7S3P4R5_9STRA (DNA-directed DNA polymerase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4R5_9STRA) HSP 1 Score: 385 bits (989), Expect = 9.880e-125 Identity = 205/466 (43.99%), Postives = 288/466 (61.80%), Query Frame = 1
Query: 10 IGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDG-TITYEKEMKGLDLVRREWCVLSKDTGKFVLDRVLSGESREIVVASIHDHLEALATRMRAGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMC------------KIAGATSPADRARHPDDVLRSDGQLEVDVEWYLNQQIVPPVSRLCAPIEGTSMAILAEKMGLDASKFAVHNNAGGEAEQDEWA-FTPTSRLRDAERFQGVEPLRMTCRACHEQADFQGVFAWDRKKPVNGPSDIQPGLVCPNSACG-AYYWGAGSEAACVSTLYQRLTLAVRGHVRVYYQTLLRCDDSSCGLRTRSMGVMGVACPARGCQGRLAREYSDKALYDQLKFYETLFDVDRAQAKVSELFNL-KVADLPVSSEHRQILGLVG--RRIRDDVNSSGYNWIRPSLWSSVF 1353
+G QVKREVNKLYK+LEL++DG+F+SMLLLKKKKYAA V E DG I Y +E+KGLDLVRR+WCV SKDTG++V +++LSG+ E+V+ +IH HLE LA +MR+GE+A+ +YVITKGL+K P +YPD KS PHVQVA M++ + VN G HIPY++ K+ AT +RARHP+++ RS+G L+ D+EWYL QQI+PP++RLC PIEGTS LA ++GLD+++++ + G + D+ + P S L D ERF+ VE LR+ C +C + +F GVF+ VN + G+VCPN C +WG + C + + + + G YYQ CD+ SC L TR + V G C RGC G L ++A++ LK+ E L ++D A +V+ +AD+ + G + SS YNWI P+ W S+F
Sbjct: 166 LGEQVKREVNKLYKTLELEIDGIFRSMLLLKKKKYAAKTVEEQKDGKVIKYGQELKGLDLVRRDWCVQSKDTGRYVTEQILSGQENEVVLHNIHSHLEELAKKMRSGELALDKYVITKGLSKHPKDYPDGKSLPHVQVAKQMLQNNRPVNTGDHIPYIITEHVPPEHLPEGYKVPSAT---ERARHPEEITRSNGALKPDIEWYLTQQILPPIARLCEPIEGTSQQELANRLGLDSTRYSNGSGPGANLDADQDIDYKPASSLPDEERFKDVEKLRLYCLSCRTENEFPGVFS------VNKEGAVVSGMVCPNPECQHPAFWGHTTYFDCYARITNSMAIWTYGLTCRYYQGTYCCDEPSCALVTRQLSVTGPRCLRRGCPGTLQPSTFERAVHTHLKYLERLVNIDHAAEQVAAKGKHGTLADVKRLLNKHEKTAFQGFHEMACKSLESSAYNWITPTFWRSLF 622 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig100.258.1 >prot_D-herbacea_F_contig100.258.1 ID=prot_D-herbacea_F_contig100.258.1|Name=mRNA_D-herbacea_F_contig100.258.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=464bp VKEIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTback to top mRNA from alignment at D-herbacea_F_contig100:839245..847584- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig100.258.1 ID=mRNA_D-herbacea_F_contig100.258.1|Name=mRNA_D-herbacea_F_contig100.258.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=8340bp|location=Sequence derived from alignment at D-herbacea_F_contig100:839245..847584- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig100:839245..847584- >mRNA_D-herbacea_F_contig100.258.1 ID=mRNA_D-herbacea_F_contig100.258.1|Name=mRNA_D-herbacea_F_contig100.258.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2784bp|location=Sequence derived from alignment at D-herbacea_F_contig100:839245..847584- (Desmarestia herbacea DmunF female)back to top |