mRNA_D-herbacea_F_contig100.256.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig100.256.1 vs. uniprot
Match: A0A6H5KEX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEX8_9PHAE) HSP 1 Score: 350 bits (898), Expect = 7.600e-115 Identity = 195/321 (60.75%), Postives = 223/321 (69.47%), Query Frame = 3
Query: 27 SAARWCHHHSPRLPFAAAGCHTSFPANRLLSTMTTRTSPGPKVCTLDCTGTIMRIKGSLPRLYLGVLEDRLGVQEGAIPG-VSEPALVKSFGASLKKRSRENPCFGSGVMSSEEWWADVVRATFRGAGVAEENLD-------------------GPVFDDVFEKLFHDVFTSELAWELIPGAEDVIRDLRAWCQEDEGPLALGVISNFDERLHPLLKNLGMHDSFDFVLTSRECGSEKPDPHMFQEALKRAGASGYGDS---GLHVGDNFSKDVLGAHAAGWGSVLITEG-DCTSEEERGVEH-VRVRGFVNVPEALGVGR 914
SA +W H LP T P+ R L TM GP V LDCTGTIMRIKGS+PRLYLGVLEDRLGV EG +P VSE L+ SF ASLK+RS+E PCFG+GVMSSE+WWA+VV ATFRGAGV++E L G VFDDVF++LFHDVFTS AWEL+PGAE+V+ DLRAW E GP ALG +SNFDERLHPLLKNLG+++SFDFVLTSRECGSEKP+PHMF EALKRAG+SG GD G+ VGD F DVLGA + GW +VLIT G D +EEE+ H RV VP ALG GR
Sbjct: 11 SAVKWSH-----LPVI-----TPPPSTRRLLTM----RAGPDVVCLDCTGTIMRIKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLLNSFRASLKRRSKELPCFGTGVMSSEDWWAEVVMATFRGAGVSDETLGISQEGDRGGGXXXXXXXXXGRVFDDVFDRLFHDVFTSTTAWELVPGAEEVLEDLRAWVGEAGGPRALGAVSNFDERLHPLLKNLGVYESFDFVLTSRECGSEKPEPHMFHEALKRAGSSGGGDGDGRGVIVGDTFRTDVLGARSVGWDAVLITRGKDPATEEEQDTTHYARVDDLRGVPAALGRGR 317
BLAST of mRNA_D-herbacea_F_contig100.256.1 vs. uniprot
Match: A0A8J5XU42_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XU42_DIALT) HSP 1 Score: 161 bits (407), Expect = 1.160e-41 Identity = 102/279 (36.56%), Postives = 141/279 (50.54%), Query Frame = 3
Query: 147 PKVCTLDCTGTIMRIKGSLPRLYLGVLEDRLGVQ-----------EGAIPGVSEPALVKSFGASLKKRSRENPCFGSGVMSSEEWWADVVRATFRGAGVAEENLDGPV---FDDVFEKLFHDVFTSELAWELIPGAEDVIRDLRAW-CQEDEGPLALGVISNFDERLHPLLKNLGMHDSFDFVLTSRECGSEKPDPHMFQEALKRAGASGYGDSG---LHVGDNFSKDVLGAHAAGWGSVLITEGDCTSE-------EERGVEHVRVRGFVNVPEALGV 908
P++ T D TGT+MR++ + +Y L L E A V A+ ++FG + + +PCFG+G +SS +WW+ VVR F GAGV+E + + F ++E F S WEL+ + V++ L W Q G L +GVISNFD+RL LL +LG+ FDFVLTSRE G EKP +F+ A +RAG + S +HVGD F DVLGA AGW +V + D E EH R+ VP +G
Sbjct: 10 PRLVTFDATGTLMRVQRPVGAIYRDALISSLSASKLARTADLSAAELAACNVDPVAIGRAFGRAYAAQCAAHPCFGAGSLSSRDWWSSVVREAFVGAGVSEAVVRAEMPLLFPTLYES-----FASTATWELLDASAGVVQQLARWRAQLPPGELTIGVISNFDDRLPALLNSLGLGRYFDFVLTSREHGDEKPCRSIFERASERAGLATVDVSPRTCVHVGDTFGTDVLGASRAGWRAVFVASDDALGELMPEAFVAMAETEHERIPSLGFVPRIVGA 283
BLAST of mRNA_D-herbacea_F_contig100.256.1 vs. uniprot
Match: A0A7S2PCP1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCP1_9STRA) HSP 1 Score: 157 bits (398), Expect = 9.970e-40 Identity = 96/237 (40.51%), Postives = 136/237 (57.38%), Query Frame = 3
Query: 147 PKVCTLDCTGTIMRIKGSLPRLYLGVLEDRLGVQEGAIPGVSEPALVKS-FGASLKKRSRENPCFGSGV-MSSEEWWADVVRATF---------RGAGVAEENLDGPVFDDVFEKLFHDVFTSELAWELIPGAEDVIRDLRAWCQEDEGPLALGVISNFDERLHPLLKNLGMHDSFDFVLTSRECGSEKPDPHMFQEALKRAGASGYGDSGL--HVGDNFSKDVLGAHAAGWGSVLI 818
P++ T D T T++++K + Y +L + + + PA+ S F + + + + PCFG G+ M+S EWWA+ + T+ RG + +DGP+ D V E L++ VF S AWEL PG D + + W +E+ GP L V+SNFDERLH +L +G+ D+FDFVLTSRE GSEKP+ F+ A+ RAG + D L HVGD F DV+GA AGW SV I
Sbjct: 89 PQLITFDATDTLIQLKSEVGMTYRLILHEATRFRSR----LPTPAVFTSAFNQAFTETNEKYPCFGCGLGMTSREWWAECTKRTYALVEHIDYERGL---RDRMDGPLGDAVAEVLYNQVFASTEAWELKPGVLDALSRFKMW-REEGGP-QLAVLSNFDERLHSILDQVGVADAFDFVLTSREIGSEKPNRSAFEVAMSRAGVA---DPSLCMHVGDGFDSDVVGASNAGWHSVWI 313
BLAST of mRNA_D-herbacea_F_contig100.256.1 vs. uniprot
Match: A0A7S2G2K6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2K6_9STRA) HSP 1 Score: 154 bits (390), Expect = 5.900e-39 Identity = 95/246 (38.62%), Postives = 143/246 (58.13%), Query Frame = 3
Query: 90 TSFPANRLLSTMTTRTSPGPKVCTLDCTGTIMRIKGSLPRLYLGVLEDRLGVQEGAIPGVSEPALVKSFGASLKKRSRENPCFG-SGVMSSEEWWADVVRATFRGAGVAEENLDGPVFDDVFEKLFHDVFTSELAWELIPGAEDVIRDLRAWCQEDEGPLALGVISNFDERLHPLLKNLGMHDSFDFVLTSRECGSEKPDPHMFQEALKRAGASGYGDSGLHVGDNFSKDVLGAHAAGWGSVLITE 824
TS PA L +T + P++ T D TGT++++ + Y VL G++ P + A + + A + + +PCFG S +S+++WWA VVR T+ GV + +D P+F +F++L+H+VFT WEL V+ L+ W + +GP LGVISNFDERL LL+ LG+ D FD ++TS+ECG EKP +F AL R G D+ +HVG+++ DV GA AAGW ++ + E
Sbjct: 76 TSEPAGVLPPPITQK----PQLITFDATGTLIQLAEPVGMHYRQVLMKHTGIRLPR-PDIFTDAFKEVYDA----KCQASPCFGCSDSISAQDWWASVVRDTYTKVGVPSDIID-PLFPLLFDELYHEVFTGTDGWELNADTMMVLDKLKEWQETGDGP-RLGVISNFDERLPKLLEALGIADYFDIIITSKECGMEKPCRQIFDIALTRLGIYER-DAAVHVGNDYDTDVKGATAAGWNALYVKE 309
BLAST of mRNA_D-herbacea_F_contig100.256.1 vs. uniprot
Match: A0A7S2STH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STH1_9STRA) HSP 1 Score: 152 bits (384), Expect = 6.900e-38 Identity = 97/229 (42.36%), Postives = 129/229 (56.33%), Query Frame = 3
Query: 147 PKVCTLDCTGTIMRIKGSLPRLYLGVLEDRLGVQEGAIPGVSEPALVKSFGASLKKRSRENPCFGSGV-MSSEEWWADVVRATFRGAGVAEENLDGPVFDDVFEKLFHDVFTSELAWELIPGAE---DVIRDLRAWCQEDEGPLALGVISNFDERLHPLLKNLGMHDSFDFVLTSRECGSEKPDPHMFQEALKRAGASGYGDS-GLHVGDNFSKDVLGAHAAGWGSVLI 818
P+V T D TGT+M++ + Y L G++ +P S +F K +S E PCFG G M S +WW VVR T+ GV E+ LD P+ ++F+ L+ +VF WEL A D + +L+ ED+ PL LGVISNFDERLH LL NLG+ FD VLTS+EC EKP+ +F AL R G Y S +H+GD F KDV GA AGW ++ +
Sbjct: 101 PRVVTFDATGTLMQLTEPVGMHYREALLQASGLR---LP--SPDHFDAAFKEVYKAQSEEFPCFGCGAAMPSRDWWYPVVRDTYLKTGVPEKILD-PLLPEIFDSLYDNVFAGSEGWELNEQAIYVLDTLIELKESRAEDD-PLYLGVISNFDERLHKLLDNLGIAHYFDIVLTSKECCVEKPNSPIFDMALSRLGI--YDRSRAVHIGDTFDKDVAGAARAGWNAIFV 320
BLAST of mRNA_D-herbacea_F_contig100.256.1 vs. uniprot
Match: A0A835YZN2_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN2_9STRA) HSP 1 Score: 136 bits (343), Expect = 6.500e-33 Identity = 88/265 (33.21%), Postives = 138/265 (52.08%), Query Frame = 3
Query: 141 PGPKVCTLDCTGTIMRIKGSLPRLYLGVLEDRLGVQEGAIPGVSEPALVKS----FGASLKKRSRENPCFGSGV-MSSEEWWADVVR----ATFRGAGVAEENLDGPVFDDVFEKLFHDVFTSELAWELIPGAEDVIRDLRAWCQEDEGPLALGVISNFDERLHPLLKNLGMHDSFDFVLTSRECGSEKPDPHMFQEALKRAGASGYGDSGLHVGDNFSKDVLGAHAAGWGSVLITEGDCTSEEERGVEHVRVRGFVNVPEALGV 908
P PK+ T D GT++++ P+ +L + L G + + P L ++ + +L + PC+G G ++S +WW VV T + + PV +++F++LF++ FT A+EL P A + L W + GPL LG+++N DERL +L NLG+ + FDFVLTSR+ GSE P +F AL +AG + ++ LH GD+ +D+ GA AAGW S LI +G + V G + LG+
Sbjct: 23 PAPKLITFDAEGTLLQLAS--PKGL--ILRESLLKAHGYLARLPGPDLFQASHAAYDKALNAATAAQPCYGCGTGVTSHQWWYGVVYDALVETLEAHNIPPSEMVDPVMEELFDELFYETFTGPEAYELRPDAARTLEKLAEWREAGTGPL-LGIVTNADERLPTVLLNLGILEVFDFVLTSRQIGSELPARAIFDVALDKAGLTNAAEA-LHCGDDLERDIGGAAAAGWQSCLIAN----PPAPQGPQAYTVMGISGLLPRLGL 277
BLAST of mRNA_D-herbacea_F_contig100.256.1 vs. uniprot
Match: L8GZ50_ACACA (HAD hydrolase, REG2-like, family IA subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZ50_ACACA) HSP 1 Score: 134 bits (338), Expect = 1.610e-32 Identity = 87/238 (36.55%), Postives = 125/238 (52.52%), Query Frame = 3
Query: 147 PKVCTLDCTGTIMRIKGSLPRLYLGVLEDRLGVQEGAIPGVSEPALVKSFGASLKKRSRENPCFGSGV-MSSEEWWADVVRATFRGAGVA---EENLDGPVFDDVFEKLFHDVFTSELAWELIPGAEDVIRDLRAWCQEDEGPLALGVISNFDERLHPLLKNLGMHDSFDFVLTSRECGSEKPDPHMFQEALKRAGASGYGDSGLHVGDNFSKDVLGAHAAGWGSVLITEGDCTSEEE 848
PK+ +LD TGT+ R++GS+ Y E GV G+ +L + F A+ + + +P FG G +SS WW+ + AT A E VF +F++++HD FT AWE+ P E VI+ LR+ + + V+SNFDERL LLKNLG+ FD VL S G KPDP +F +AL++A G +HVGD++ KD GA AG + D + E+
Sbjct: 5 PKLVSLDATGTLFRVRGSVGEAYARAAE-AFGVH-----GLRPASLTRGFFAAWRDHNVRHPNFGHGTELSSYNWWSSLFGATLAHARPELSHSEEFAADVFPKLFDQVWHD-FTRAEAWEVFPETEPVIKTLRS------NGIKVAVVSNFDERLPLLLKNLGLDHLFDVVLPSCYAGVAKPDPDIFYQALRKANVEG--SEAVHVGDDYKKDYRGAKDAGLSRAFLMCRDAVALEK 227
BLAST of mRNA_D-herbacea_F_contig100.256.1 vs. uniprot
Match: K7F1C4_PELSI (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=2 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7F1C4_PELSI) HSP 1 Score: 132 bits (331), Expect = 8.150e-32 Identity = 92/257 (35.80%), Postives = 134/257 (52.14%), Query Frame = 3
Query: 150 KVCTLDCTGTIMRIKGSLPRLYLGVLEDRLGVQEGAIPGVSEPALVKSFGASLKKRSRENPCFG-SGVMSSEEWWADVVRATFRGAGVAEENLDGPVFDDVFEKLFHDVFTSELAWELIPGAEDVIRDLRAWCQEDEGPLALGVISNFDERLHPLLKNLGMHDSFDFVLTSRECGSEKPDPHMFQEALKRAGASGYGDSGLHVGDNFSKDVLGAHAAGWGSVLITEGDCTSEEERGV--EHVRVRGFVNVPEALGVG 911
++ T D T++R++ + Y + + GVQ V AL KSF + K +S+ P +G S +SS++WWADVV+ TFR AGV E+ L + E L+ + + S WEL+PGA + + R + + + VISNFD RL +L + + FDFVLTS E G KPD +FQ AL +G + HVGD++ KD A AG S L+T C + ER V EHV + ++ +G G
Sbjct: 6 RLLTWDVKDTLLRLRHPIGENYSALAQVH-GVQ------VRPEALTKSFHQAYKVQSKHFPNYGLSKGLSSKQWWADVVKQTFRLAGVHEDRL----LTSIAESLYRE-YCSAQTWELLPGARETLGQCR------QLGIRMAVISNFDMRLEKILSHCNLRHHFDFVLTSEEAGFAKPDLRIFQRALHISGVAP--QQAAHVGDSYVKDYRAARDAGMHSFLLTAAGCANRWEREVPKEHV-LPSLTHLLSVIGKG 241
BLAST of mRNA_D-herbacea_F_contig100.256.1 vs. uniprot
Match: A0A7L4GQK7_PODST (Haloacid dehalogenase-like hydrolase domain-containing protein 3 (Fragment) n=1 Tax=Podargus strigoides TaxID=8905 RepID=A0A7L4GQK7_PODST) HSP 1 Score: 129 bits (324), Expect = 7.380e-31 Identity = 86/240 (35.83%), Postives = 126/240 (52.50%), Query Frame = 3
Query: 150 KVCTLDCTGTIMRIKGSLPRLYLGVLEDRLGVQEGAIPGVSEPALVKSFGASLKKRSRENPCFGSGV-MSSEEWWADVVRATFRGAGVAEENLDGPVFDDVFEKLFHDVFTSELAWELIPGAEDVIRDLRAWCQEDEGPLALGVISNFDERLHPLLKNLGMHDSFDFVLTSRECGSEKPDPHMFQEALKRAGASGYGDSGLHVGDNFSKDVLGAHAAGWGSVLITEGDCTSEEERGVEHV 866
++ T D T++R++ + Y + GV+ V AL SF + +SR P +G G +SS++WWADVV+ TFR AGV E+ V + E L+HD F S WE++PGA + +R WC++ +GV+SNFD RL +L + FDFVLTS++ G KPD +F++AL+ G + HVGD++++D A A G S L E E EHV
Sbjct: 6 RLLTWDAKDTLVRLREPVGESYAAEARAQ-GVR------VQPGALSHSFREAYGAQSRRFPNYGRGQGLSSQQWWADVVKQTFRLAGVHEDR----VLTLIAENLYHD-FCSARNWEVLPGAGETLR----WCRQRG--FHMGVVSNFDSRLEDILSQCNLRHHFDFVLTSKDAGFAKPDRRIFEQALRLGGV--LPEQAAHVGDSYTRDYRAARALGMHSFLFRAAGQGEEPEVPPEHV 225
BLAST of mRNA_D-herbacea_F_contig100.256.1 vs. uniprot
Match: A0A7S2RCE0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RCE0_9STRA) HSP 1 Score: 128 bits (321), Expect = 2.340e-30 Identity = 67/184 (36.41%), Postives = 107/184 (58.15%), Query Frame = 3
Query: 147 PKVCTLDCTGTIMRIKGSLPRLYLGVLEDRLGVQEGAIPGVSEPALVKSFGASLKKRSRENPCFG-SGVMSSEEWWADVVRATFRGAGVAE----ENLDGPVFDDVFEKLFHDVFTSELAWELIPGAEDVIRDLRAWCQEDEGPLALGVISNFDERLHPLLKNLGMHDSFDFVLTSRECGSEKP 683
PK+ T+D +++ + + + VL + V+ K+F + K+ + PCFG ++S +WW V + T+ + E E LD + +DVF+ LFHDVF +E AWE+ PGA + + ++ W +E++GP+AL ++SN+DERLH +L+ L + D+FDFVLTSRE GS P
Sbjct: 65 PKLITIDAFDILIQTRAEMGWFFRDVLHEATDYNARL---VAPEHYTKAFHTAYKEVDDDMPCFGVKDGITSRQWWKIVTQKTYAYVDLTEPGLREELDEWLLEDVFDVLFHDVFMTEEAWEIKPGALEALSYMKKWREEEQGPMALAILSNYDERLHAILEQLDLIDAFDFVLTSREIGSPMP 245 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig100.256.1 >prot_D-herbacea_F_contig100.256.1 ID=prot_D-herbacea_F_contig100.256.1|Name=mRNA_D-herbacea_F_contig100.256.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=279bp MTTRTSPGPKVCTLDCTGTIMRIKGSLPRLYLGVLEDRLGVQEGAIPGVSback to top mRNA from alignment at D-herbacea_F_contig100:821861..830509- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig100.256.1 ID=mRNA_D-herbacea_F_contig100.256.1|Name=mRNA_D-herbacea_F_contig100.256.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=8649bp|location=Sequence derived from alignment at D-herbacea_F_contig100:821861..830509- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig100:821861..830509- >mRNA_D-herbacea_F_contig100.256.1 ID=mRNA_D-herbacea_F_contig100.256.1|Name=mRNA_D-herbacea_F_contig100.256.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1674bp|location=Sequence derived from alignment at D-herbacea_F_contig100:821861..830509- (Desmarestia herbacea DmunF female)back to top |