prot_D-herbacea_F_contig10.171.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig10.171.1
Unique Nameprot_D-herbacea_F_contig10.171.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length233
Homology
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: D7FP62_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP62_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 7.380e-97
Identity = 156/231 (67.53%), Postives = 183/231 (79.22%), Query Frame = 0
Query:    1 MHLTLICALVAGLHASKSAAFVNTAGVLGVSTARQGRSSSIDSCRTTDTRMAVAPEGERGQTRAELTQSLWRTALTGAAAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRD-DSFTGDAFD 230
            M    +CAL+A  HA  ++ F+  AG+      R   SSS     +  TRMA++PEG +GQ+R EL Q++W+TALT  AAQTLL   S  LAED++TTASGLKI KLV+G GP+ E GDL+GVRFKGNYGTYEFDNIF TAEPYYMRAGVGTLVKGVEEAL++M VGDKW LTCPA+LAFGNKGRPPSPGRPRIPPGA+VEYTLELVALPGKEED+V  R  D+F+G+AFD
Sbjct:    2 MQSAFLCALLAAAHAPAASGFM-PAGLA----PRPSSSSSRQQVSSATTRMALSPEGGQGQSRGELLQTVWKTALTAGAAQTLLA--SSVLAEDSLTTASGLKINKLVQGKGPVAEQGDLIGVRFKGNYGTYEFDNIFNTAEPYYMRAGVGTLVKGVEEALLMMRVGDKWQLTCPANLAFGNKGRPPSPGRPRIPPGADVEYTLELVALPGKEEDIVEQRTGDTFSGNAFD 225          
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A835ZAW5_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAW5_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.460e-48
Identity = 89/159 (55.97%), Postives = 105/159 (66.04%), Query Frame = 0
Query:   69 SLWRTALTGAAAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRDDSFTGD 227
            S  RT    AAA   +  P  A A + ITTASGLKIKKL +G G     GDL  VRFKG Y  +EFDNIF T EP Y+RAG G LVKG++EA+V+M +GD+W LT P  L FG KGR PSPG+PRIPP A + Y +EL ALPGKE +L    +D  T D
Sbjct:   42 SFIRTVGGAAAAAVAIATPWQAQALEEITTASGLKIKKLAEGKGEQCAAGDLAAVRFKGRYKDFEFDNIFDTEEPLYVRAGGGFLVKGLDEAMVMMRIGDRWELTIPGALGFGEKGRSPSPGKPRIPPNATLVYEMELTALPGKEGELFEALEDVPTVD 200          
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A7S4B9G1_CHRCT (Peptidylprolyl isomerase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B9G1_CHRCT)

HSP 1 Score: 145 bits (365), Expect = 1.200e-39
Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 0
Query:   78 AAAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYE--FDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLV 217
            AAA ++L+  SP  AE+ +TT+SGLK   +  GNG    VGDL+ +RFKG        FD+I  + EPYY R G G ++ GVEEA+ LM  GD W LT P DLAFG+KGR  SPG+PRIPPGA +++ LELVA+PGK++D++
Sbjct:   69 AAAASVLLAASPVRAEE-VTTSSGLKYSVVKSGNGGQPAVGDLIAIRFKGKVAATGAVFDDILESPEPYYTRVGSGNVLAGVEEAVKLMHSGDTWDLTIPGDLAFGSKGRSASPGKPRIPPGAVIDFRLELVAVPGKDDDII 209          
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A7S1E780_9STRA (Peptidylprolyl isomerase n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E780_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.700e-39
Identity = 69/130 (53.08%), Postives = 91/130 (70.00%), Query Frame = 0
Query:   89 PALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVN 218
            PA A +T+TT+SG+  + L  GNGP  + G+L  +RF    G  + D+IF T EPYY R G G+L+KGVEE L  M VGD+W LT P +LAFG KGRP S G+PRIP  AE+ + +E+V LPGKEE+L++
Sbjct:   53 PANAGETVTTSSGVSYEILKSGNGPKPDRGELAAIRFAAYAGKNKIDDIFDTPEPYYTRVGSGSLIKGVEEILPSMRVGDRWSLTVPGNLAFGPKGRPASAGKPRIPADAEIIFEVEMVGLPGKEEELID 182          
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: W7TWV9_9STRA (Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWV9_9STRA)

HSP 1 Score: 139 bits (351), Expect = 2.150e-37
Identity = 69/132 (52.27%), Postives = 91/132 (68.94%), Query Frame = 0
Query:   97 TTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRDDSFTGDA 228
            T   G+  + L KGNGP+ +VG+L  +RF G Y    FD+++ T EP Y R G  TL+KG+EEA+ +M VGD+W LT P +LAFG KGR  SPG+PRIPP A VEY L LVALPG+E ++++   DSF  +A
Sbjct:   86 TLPGGITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDL--DSFDENA 215          
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A0G4ED53_VITBC (Peptidylprolyl isomerase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ED53_VITBC)

HSP 1 Score: 136 bits (343), Expect = 5.200e-37
Identity = 67/124 (54.03%), Postives = 83/124 (66.94%), Query Frame = 0
Query:   93 EDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDL 216
            ED   T SGL    L  G GP VE GDLV +RF+G Y     D++F T+EPYY RA  G LV G+EEAL++M VGD+W L  P  LAFG +GR P+PGRPRIPP A +EY + +V +PGK + L
Sbjct:   25 EDWKETDSGLAYSVLKSGEGPKVEAGDLVVIRFRGQYKNIVIDDLFRTSEPYYARAAGGKLVAGLEEALLMMRVGDRWKLKVPGALAFGQQGRSPAPGRPRIPPNAPIEYEMLVVDIPGKGDPL 148          
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A7S0JK04_9EUKA (Peptidylprolyl isomerase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JK04_9EUKA)

HSP 1 Score: 136 bits (342), Expect = 1.910e-36
Identity = 72/145 (49.66%), Postives = 95/145 (65.52%), Query Frame = 0
Query:   79 AAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYE--FDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRD 221
            A  +L ++ +PA +    +T SGL  K +  G G    VGDL+ +RFKG        FD+I  +AEPYY R G G ++ GVEEA+ LM  GD W LT PADLAFG KGR  SPG+PRIP GA +++TLELVA+PGK+E+++   D
Sbjct:   48 ALSSLSLVCAPAASTADGSTPSGLSYKVVKSGKGGTPIVGDLIAIRFKGTVAKNGAVFDDILASAEPYYTRVGSGNVLPGVEEAVKLMKSGDVWDLTLPADLAFGAKGRSASPGKPRIPSGAIIDFTLELVAVPGKDEEIIEVND 192          
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A7S0AN93_9STRA (Peptidylprolyl isomerase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AN93_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.700e-36
Identity = 69/136 (50.74%), Postives = 95/136 (69.85%), Query Frame = 0
Query:   88 SPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFK------GNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLV 217
            +PA AED +T  SG+K + +  GNGP+  VG+L G+RFK      GN    + D+IF T EPYY R G G L+KGVEE L  M VGD+W++T P +LAFG+KGRP S G+PRIP  + + + +E+V+LPGKE++L+
Sbjct:   60 TPAFAED-VTLPSGVKYEVVKAGNGPVPTVGELAGIRFKAFVKENGN----KIDDIFDTPEPYYTRVGSGGLIKGVEEVLPKMRVGDRWIITVPGNLAFGSKGRPASAGKPRIPGDSTIIFEVEMVSLPGKEDELI 190          
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A2V3IIQ7_9FLOR (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIQ7_9FLOR)

HSP 1 Score: 135 bits (340), Expect = 3.410e-36
Identity = 73/149 (48.99%), Postives = 99/149 (66.44%), Query Frame = 0
Query:   72 RTAL-TGAAAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNT 219
            RTAL T A + T  +L   A +E    T S L+ K +  G+G   E+GDLVG+RFKG+Y    FDN+F    PY+ R G GT++KG+EEA++LM VGD + +T P +LAFG KGR  S G+P IPP A V YT+EL  +PGK+E+L+ +
Sbjct:   40 RTALVTLATSATAFLLSQTANSE----TTSPLQYKVVQSGSGATPELGDLVGIRFKGSYNGVVFDNLFNEPAPYFYRVGSGTILKGLEEAVLLMKVGDVFEVTLPGELAFGRKGRRASAGKPSIPPNATVSYTIELTTIPGKDEELLES 184          
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A7S4I2W1_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I2W1_9STRA)

HSP 1 Score: 135 bits (340), Expect = 3.820e-36
Identity = 72/154 (46.75%), Postives = 97/154 (62.99%), Query Frame = 0
Query:   64 AELTQSLWRTALTGAAAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLV 217
            AE++++ +   + G+AA   L   S AL     TT SG+ I  +  G+GP   VG++  +RFK   G    D+IF T EPYY R G G L+KG EE +  M VGD+W+LT P DLAFG KGRP S G+PRIP  + VE+ +E+V LPGKE +L+
Sbjct:   37 AEVSRNDFVRLVAGSAAAAALGGVSSALPAFAETTPSGVVIDVVKSGDGPSPSVGEMAAIRFKATIGGNVIDDIFNTPEPYYTRVGSGGLIKGAEEVIPKMRVGDRWVLTVPGDLAFGKKGRPASAGKPRIPGDSVVEFEVEMVGLPGKEVELI 190          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP62_ECTSI7.380e-9767.53Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZAW5_9STRA1.460e-4855.97Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S4B9G1_CHRCT1.200e-3952.82Peptidylprolyl isomerase n=1 Tax=Chrysotila carter... [more]
A0A7S1E780_9STRA5.700e-3953.08Peptidylprolyl isomerase n=1 Tax=Thalassionema nit... [more]
W7TWV9_9STRA2.150e-3752.27Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae T... [more]
A0A0G4ED53_VITBC5.200e-3754.03Peptidylprolyl isomerase n=1 Tax=Vitrella brassica... [more]
A0A7S0JK04_9EUKA1.910e-3649.66Peptidylprolyl isomerase n=1 Tax=Calcidiscus lepto... [more]
A0A7S0AN93_9STRA2.700e-3650.74Peptidylprolyl isomerase n=1 Tax=Minutocellus poly... [more]
A0A2V3IIQ7_9FLOR3.410e-3648.99Peptidylprolyl isomerase n=1 Tax=Gracilariopsis ch... [more]
A0A7S4I2W1_9STRA3.820e-3646.75Peptidylprolyl isomerase n=1 Tax=Odontella aurita ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 116..207
e-value: 2.2E-15
score: 56.7
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 118..210
score: 18.533
NoneNo IPR availableGENE3D3.10.50.40coord: 80..222
e-value: 2.6E-26
score: 94.0
NoneNo IPR availablePANTHERPTHR43811FAMILY NOT NAMEDcoord: 57..214
NoneNo IPR availablePANTHERPTHR43811:SF17PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTICcoord: 57..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.678
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 76..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig10contigD-herbacea_F_contig10:1094545..1099588 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig10.171.1mRNA_D-herbacea_F_contig10.171.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig10 1093352..1099651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig10.171.1 ID=prot_D-herbacea_F_contig10.171.1|Name=mRNA_D-herbacea_F_contig10.171.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=233bp
MHLTLICALVAGLHASKSAAFVNTAGVLGVSTARQGRSSSIDSCRTTDTR
MAVAPEGERGQTRAELTQSLWRTALTGAAAQTLLVLPSPALAEDTITTAS
GLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGV
GTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEV
EYTLELVALPGKEEDLVNTRDDSFTGDAFDSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom