mRNA_D-herbacea_F_contig10.171.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: D7FP62_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP62_ECTSI) HSP 1 Score: 293 bits (751), Expect = 3.830e-92 Identity = 156/232 (67.24%), Postives = 183/232 (78.88%), Query Frame = 1
Query: 61 QMHLTLICALVAGLHASKSAAFVNTAGVLGVSTARQGRSSSIDSCRTTDTRMAVAPEGERGQTRAELTQSLWRTALTGAAAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRD-DSFTGDAFD 753
M +CAL+A HA ++ F+ AG+ R SSS + TRMA++PEG +GQ+R EL Q++W+TALT AAQTLL S LAED++TTASGLKI KLV+G GP+ E GDL+GVRFKGNYGTYEFDNIF TAEPYYMRAGVGTLVKGVEEAL++M VGDKW LTCPA+LAFGNKGRPPSPGRPRIPPGA+VEYTLELVALPGKEED+V R D+F+G+AFD
Sbjct: 1 MMQSAFLCALLAAAHAPAASGFM-PAGLA----PRPSSSSSRQQVSSATTRMALSPEGGQGQSRGELLQTVWKTALTAGAAQTLLA--SSVLAEDSLTTASGLKINKLVQGKGPVAEQGDLIGVRFKGNYGTYEFDNIFNTAEPYYMRAGVGTLVKGVEEALLMMRVGDKWQLTCPANLAFGNKGRPPSPGRPRIPPGADVEYTLELVALPGKEEDIVEQRTGDTFSGNAFD 225
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A835ZAW5_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAW5_9STRA) HSP 1 Score: 168 bits (426), Expect = 6.080e-45 Identity = 89/159 (55.97%), Postives = 105/159 (66.04%), Query Frame = 1
Query: 268 SLWRTALTGAAAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRDDSFTGD 744
S RT AAA + P A A + ITTASGLKIKKL +G G GDL VRFKG Y +EFDNIF T EP Y+RAG G LVKG++EA+V+M +GD+W LT P L FG KGR PSPG+PRIPP A + Y +EL ALPGKE +L +D T D
Sbjct: 42 SFIRTVGGAAAAAVAIATPWQAQALEEITTASGLKIKKLAEGKGEQCAAGDLAAVRFKGRYKDFEFDNIFDTEEPLYVRAGGGFLVKGLDEAMVMMRIGDRWELTIPGALGFGEKGRSPSPGKPRIPPNATLVYEMELTALPGKEGELFEALEDVPTVD 200
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A7S4B9G1_CHRCT (Peptidylprolyl isomerase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B9G1_CHRCT) HSP 1 Score: 145 bits (365), Expect = 3.550e-36 Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 1
Query: 295 AAAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYE--FDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLV 714
AAA ++L+ SP AE+ +TT+SGLK + GNG VGDL+ +RFKG FD+I + EPYY R G G ++ GVEEA+ LM GD W LT P DLAFG+KGR SPG+PRIPPGA +++ LELVA+PGK++D++
Sbjct: 69 AAAASVLLAASPVRAEE-VTTSSGLKYSVVKSGNGGQPAVGDLIAIRFKGKVAATGAVFDDILESPEPYYTRVGSGNVLAGVEEAVKLMHSGDTWDLTIPGDLAFGSKGRSASPGKPRIPPGAVIDFRLELVAVPGKDDDII 209
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A7S1E780_9STRA (Peptidylprolyl isomerase n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E780_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.020e-35 Identity = 70/134 (52.24%), Postives = 92/134 (68.66%), Query Frame = 1
Query: 328 PALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRDD 729
PA A +T+TT+SG+ + L GNGP + G+L +RF G + D+IF T EPYY R G G+L+KGVEE L M VGD+W LT P +LAFG KGRP S G+PRIP AE+ + +E+V LPGKEE+L++ D
Sbjct: 53 PANAGETVTTSSGVSYEILKSGNGPKPDRGELAAIRFAAYAGKNKIDDIFDTPEPYYTRVGSGSLIKGVEEILPSMRVGDRWSLTVPGNLAFGPKGRPASAGKPRIPADAEIIFEVEMVGLPGKEEELIDIIGD 186
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: W7TWV9_9STRA (Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWV9_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.350e-34 Identity = 69/132 (52.27%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 352 TTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRDDSFTGDA 747
T G+ + L KGNGP+ +VG+L +RF G Y FD+++ T EP Y R G TL+KG+EEA+ +M VGD+W LT P +LAFG KGR SPG+PRIPP A VEY L LVALPG+E ++++ DSF +A
Sbjct: 86 TLPGGITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDL--DSFDENA 215
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A0G4ED53_VITBC (Peptidylprolyl isomerase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ED53_VITBC) HSP 1 Score: 137 bits (345), Expect = 4.500e-34 Identity = 70/135 (51.85%), Postives = 87/135 (64.44%), Query Frame = 1
Query: 340 EDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRDDSFTGD 744
ED T SGL L G GP VE GDLV +RF+G Y D++F T+EPYY RA G LV G+EEAL++M VGD+W L P LAFG +GR P+PGRPRIPP A +EY + +V +PGK + L D + GD
Sbjct: 25 EDWKETDSGLAYSVLKSGEGPKVEAGDLVVIRFRGQYKNIVIDDLFRTSEPYYARAAGGKLVAGLEEALLMMRVGDRWKLKVPGALAFGQQGRSPAPGRPRIPPNAPIEYEMLVVDIPGKGDPL-----DLYFGD 154
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A7S0JK04_9EUKA (Peptidylprolyl isomerase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JK04_9EUKA) HSP 1 Score: 136 bits (343), Expect = 2.230e-33 Identity = 72/145 (49.66%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 298 AAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYE--FDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRD 726
A +L ++ +PA + +T SGL K + G G VGDL+ +RFKG FD+I +AEPYY R G G ++ GVEEA+ LM GD W LT PADLAFG KGR SPG+PRIP GA +++TLELVA+PGK+E+++ D
Sbjct: 48 ALSSLSLVCAPAASTADGSTPSGLSYKVVKSGKGGTPIVGDLIAIRFKGTVAKNGAVFDDILASAEPYYTRVGSGNVLPGVEEAVKLMKSGDVWDLTLPADLAFGAKGRSASPGKPRIPSGAIIDFTLELVAVPGKDEEIIEVND 192
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A7S0AN93_9STRA (Peptidylprolyl isomerase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AN93_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.070e-33 Identity = 70/141 (49.65%), Postives = 96/141 (68.09%), Query Frame = 1
Query: 325 SPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFK------GNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRDD 729
+PA AED +T SG+K + + GNGP+ VG+L G+RFK GN + D+IF T EPYY R G G L+KGVEE L M VGD+W++T P +LAFG+KGRP S G+PRIP + + + +E+V+LPGKE++L+ D
Sbjct: 60 TPAFAED-VTLPSGVKYEVVKAGNGPVPTVGELAGIRFKAFVKENGN----KIDDIFDTPEPYYTRVGSGGLIKGVEEVLPKMRVGDRWIITVPGNLAFGSKGRPASAGKPRIPGDSTIIFEVEMVSLPGKEDELIELIGD 195
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A7S4I2W1_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I2W1_9STRA) HSP 1 Score: 135 bits (341), Expect = 4.220e-33 Identity = 73/159 (45.91%), Postives = 98/159 (61.64%), Query Frame = 1
Query: 253 AELTQSLWRTALTGAAAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNTRDD 729
AE++++ + + G+AA L S AL TT SG+ I + G+GP VG++ +RFK G D+IF T EPYY R G G L+KG EE + M VGD+W+LT P DLAFG KGRP S G+PRIP + VE+ +E+V LPGKE +L+ D
Sbjct: 37 AEVSRNDFVRLVAGSAAAAALGGVSSALPAFAETTPSGVVIDVVKSGDGPSPSVGEMAAIRFKATIGGNVIDDIFNTPEPYYTRVGSGGLIKGAEEVIPKMRVGDRWVLTVPGDLAFGKKGRPASAGKPRIPGDSVVEFEVEMVGLPGKEVELIELIGD 195
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Match: A0A2V3IIQ7_9FLOR (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIQ7_9FLOR) HSP 1 Score: 135 bits (340), Expect = 5.170e-33 Identity = 73/149 (48.99%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 277 RTAL-TGAAAQTLLVLPSPALAEDTITTASGLKIKKLVKGNGPLVEVGDLVGVRFKGNYGTYEFDNIFTTAEPYYMRAGVGTLVKGVEEALVLMSVGDKWLLTCPADLAFGNKGRPPSPGRPRIPPGAEVEYTLELVALPGKEEDLVNT 720
RTAL T A + T +L A +E T S L+ K + G+G E+GDLVG+RFKG+Y FDN+F PY+ R G GT++KG+EEA++LM VGD + +T P +LAFG KGR S G+P IPP A V YT+EL +PGK+E+L+ +
Sbjct: 40 RTALVTLATSATAFLLSQTANSE----TTSPLQYKVVQSGSGATPELGDLVGIRFKGSYNGVVFDNLFNEPAPYFYRVGSGTILKGLEEAVLLMKVGDVFEVTLPGELAFGRKGRRASAGKPSIPPNATVSYTIELTTIPGKDEELLES 184 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig10.171.1 >prot_D-herbacea_F_contig10.171.1 ID=prot_D-herbacea_F_contig10.171.1|Name=mRNA_D-herbacea_F_contig10.171.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=233bp MHLTLICALVAGLHASKSAAFVNTAGVLGVSTARQGRSSSIDSCRTTDTRback to top mRNA from alignment at D-herbacea_F_contig10:1093352..1099651- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig10.171.1 ID=mRNA_D-herbacea_F_contig10.171.1|Name=mRNA_D-herbacea_F_contig10.171.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=6300bp|location=Sequence derived from alignment at D-herbacea_F_contig10:1093352..1099651- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig10:1093352..1099651- >mRNA_D-herbacea_F_contig10.171.1 ID=mRNA_D-herbacea_F_contig10.171.1|Name=mRNA_D-herbacea_F_contig10.171.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1398bp|location=Sequence derived from alignment at D-herbacea_F_contig10:1093352..1099651- (Desmarestia herbacea DmunF female)back to top |