prot_D-herbacea_F_contig1.113.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1.113.1
Unique Nameprot_D-herbacea_F_contig1.113.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length310
Homology
BLAST of mRNA_D-herbacea_F_contig1.113.1 vs. uniprot
Match: D7FUA9_ECTSI (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUA9_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 5.840e-91
Identity = 144/201 (71.64%), Postives = 171/201 (85.07%), Query Frame = 0
Query:   34 GGSGETEYYSWTETDADMEVRVSLPPGTPSKAVQLSVTRSSLTLGLRGRESPILKGTLLGEVQADMSHWTMEEMDDTGAKVLYLCLEKVVGDED------SEDWEGVLEGEEALNVWYANKDKAFDVNEYVKKMGYDRERDLDKVDKTMFSDLTSEMRQNLETNLPKTSFTEKDDMIPVVAEPKVSPIIDAGVLGVRPPNP 228
            GG+G+TEYYSWTETD+DMEVRV LPPGT +K+VQLSVT++SLTLGL+GRE P+LKG+L G+V AD SHWTMEEM+DTG KVLYLCLEKV   E        +DW GVLEGEE LNV+Y +KDK FDV EYVK+MGYDRERD+ KVDK MFSDLT+EM++NL+T LPK+SFT+KDDMIPV+A+PKVSP+ID GVLG+  P P
Sbjct:  206 GGTGDTEYYSWTETDSDMEVRVPLPPGTAAKSVQLSVTKTSLTLGLKGREGPVLKGSLKGQVHADESHWTMEEMEDTGEKVLYLCLEKVADMEALAANSMPQDWVGVLEGEEPLNVYYPDKDKDFDVGEYVKRMGYDRERDIGKVDKAMFSDLTAEMKENLQTTLPKSSFTDKDDMIPVMADPKVSPVIDTGVLGLPTPPP 406          
BLAST of mRNA_D-herbacea_F_contig1.113.1 vs. uniprot
Match: A0A0G4I482_9ALVE (CS domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I482_9ALVE)

HSP 1 Score: 68.6 bits (166), Expect = 4.210e-9
Identity = 37/117 (31.62%), Postives = 64/117 (54.70%), Query Frame = 0
Query:   30 VVVDGGSGETEYYSWTETDADMEVRVSLPPGTPSKAVQLSVTRSSLTLGLRGRESPILKGTLLGEVQADMSHWTMEEMDDTGAKVLYLCLEKVVGDEDSE-DWEGVLEGEEALNVWY 145
            V+V  G G TEYYSW ETD++M++RV LP  T    +   + +  + + L+  E PI++G   G ++   S W++    +      +L L   +   DS  +W GV+EG++ +++ Y
Sbjct:  103 VLVARGFGCTEYYSWKETDSEMDIRVKLPQETNVDNIVCDIGKDWIYVRLKTAEEPIIRGQSKGLIRVHDSFWSVSREPE------FLMLNMRLQKRDSRVEWGGVIEGDQPMSIAY 213          
BLAST of mRNA_D-herbacea_F_contig1.113.1 vs. uniprot
Match: A0A5N6NFZ7_9ASTR (CS domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NFZ7_9ASTR)

HSP 1 Score: 58.5 bits (140), Expect = 1.800e-6
Identity = 34/119 (28.57%), Postives = 65/119 (54.62%), Query Frame = 0
Query:   25 ERGSPVVVDGGSGETEYYSWTETDADMEVRVSLPPGTPSKAVQLSVTRSSLTLGLRGRESPILKGTLLGEVQADMSHWTMEEMDDTGAKVLYLCLEKVVGDEDSEDWEGVLEGEEALNV 143
            ++G  V   G   + + YSW ++  ++ V +S+PPGT S+ V   + ++ L +GL+G + PIL+G L   V+ D S W +E+ +      + + L K    +  E W+ +++GE  ++ 
Sbjct:   46 KKGLRVPNKGNGLDMDNYSWVQSLQEVNVTISVPPGTKSRFVACEIKKNHLKVGLKG-QPPILEGELYKAVKVDDSFWCLEDQN-----AITVLLTK---QDQMEWWKYLVKGEPEIDT 155          
BLAST of mRNA_D-herbacea_F_contig1.113.1 vs. uniprot
Match: A0A4S2N7K8_9PEZI (CS-domain-containing protein n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2N7K8_9PEZI)

HSP 1 Score: 53.5 bits (127), Expect = 5.190e-5
Identity = 26/80 (32.50%), Postives = 51/80 (63.75%), Query Frame = 0
Query:   42 YSWTETDADMEVRVSLPPGTPSKAVQLSVTRSSLTLGLRGRESPILKGTLLGEVQADMSHWTMEEMDDTGAKVLYLCLEK 121
            YSW +T +D++V + +P GT  + + +S+ R+++++GL+G+E PI+ G+L   +  D S W++ +       V+ L +EK
Sbjct:   19 YSWKQTLSDVDVSIPVPAGTRGRDLSVSIERTTISVGLKGKE-PIISGSLPHPIVPDDSTWSLSD------NVVELHIEK 91          
BLAST of mRNA_D-herbacea_F_contig1.113.1 vs. uniprot
Match: A0A437A0B0_9PEZI (CS domain-containing protein n=1 Tax=Arthrobotrys flagrans TaxID=97331 RepID=A0A437A0B0_9PEZI)

HSP 1 Score: 53.1 bits (126), Expect = 8.510e-5
Identity = 24/65 (36.92%), Postives = 42/65 (64.62%), Query Frame = 0
Query:   42 YSWTETDADMEVRVSLPPGTPSKAVQLSVTRSSLTLGLRGRESPILKGTLLGEVQADMSHWTMEE 106
            Y WT+T  +++V VSLPPGT  + + + +  +SL + L+G+E P+ +GTL   +  D S W++ +
Sbjct:   31 YKWTQTLEEVDVTVSLPPGTRGRDLIVDIKLTSLKVALKGKE-PLFEGTLYKPIHLDDSTWSISD 94          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FUA9_ECTSI5.840e-9171.64CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A0G4I482_9ALVE4.210e-931.62CS domain-containing protein n=1 Tax=Chromera veli... [more]
A0A5N6NFZ7_9ASTR1.800e-628.57CS domain-containing protein n=1 Tax=Mikania micra... [more]
A0A4S2N7K8_9PEZI5.190e-532.50CS-domain-containing protein n=1 Tax=Ascodesmis ni... [more]
A0A437A0B0_9PEZI8.510e-536.92CS domain-containing protein n=1 Tax=Arthrobotrys ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 31..146
e-value: 9.0E-19
score: 69.6
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 37..144
IPR007052CS domainPFAMPF04969CScoord: 42..113
e-value: 1.1E-9
score: 39.1
IPR007052CS domainPROSITEPS51203CScoord: 37..135
score: 12.37
IPR037898NudC familyPANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 32..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1contigD-herbacea_F_contig1:2860360..2870890 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1.113.1mRNA_D-herbacea_F_contig1.113.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1 2860359..2870890 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1.113.1 ID=prot_D-herbacea_F_contig1.113.1|Name=mRNA_D-herbacea_F_contig1.113.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=310bp
GKLSGAWWGQTRFRRRQRPWRRGRERGSPVVVDGGSGETEYYSWTETDAD
MEVRVSLPPGTPSKAVQLSVTRSSLTLGLRGRESPILKGTLLGEVQADMS
HWTMEEMDDTGAKVLYLCLEKVVGDEDSEDWEGVLEGEEALNVWYANKDK
AFDVNEYVKKMGYDRERDLDKVDKTMFSDLTSEMRQNLETNLPKTSFTEK
DDMIPVVAEPKVSPIIDAGVLGVRPPNPSTAPPPSTTTTPRPEPVVGMAG
AAAEAEVVSEDDVSTRWAAEGATDGTAGDSYSPAFEASSDALDGVGGLSA
AAVSSTGELT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037898NudC_fam
IPR007052CS_dom
IPR008978HSP20-like_chaperone