mRNA_D-herbacea_F_contig114.1082.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig114.1082.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 514 bits (1325), Expect = 2.900e-173 Identity = 308/587 (52.47%), Postives = 384/587 (65.42%), Query Frame = 1
Query: 145 DISSFVPSYTETDKDLALFRLILACSFILLGVISLTQFYRSRWILDIRTRCVHLLVMIGGICVVFTFFVAINSSLNIIWDSGLRWFWSSLLLFFITPVFLGSYICRALRLAVVFHPRAKRALPWLIPERNYICVLLILGVAMLTVPIYHEYTLKIWEIIPKQTDILVTISLVFAGILACLYPFIRKVDDLFNISTELAAVTALTLFFAIGQKLVAKYGGDAERRWIGNHINLFFSAAVFGASVVDPLRRLAFDPLAASKRNYADRVLLSRREGRSTGRTGSSGLSSGRV--------ESEDE---------GRP-------ARLEEGSRGTRPTNEDDRAEGDGVV--GRVDDYVANP--WFATSATVYSANHNHRQRNGSVNHSQ---RRGSAGXXXXXA-----------RDDMEVWDFERLATTPLLAAAFEDFSRKALCHESVLFLSEVSRYVERLGKLEGGTYRSFITYRNDDFSTPT-PGGAGPSQYNAFCYITDTFIKAGSREEVNISDTDKKRIMLWYHKGQNWFEQEDDEGRRMVFGPAYVEVRNMLEANLLRRFLRTDQFKSVRAQREHVTAMMDSP 1776
D S PSY TDK LAL RL L C FI+LG +L +FYRSRWILDIRTR HL V + G+ ++ + V +N + I+WDSGL WFW SLLLFF++P GSYICRALRLAVVF+PRAK ALPWLIPERNY+ VLL+ + +L +PIYHEYTL++W+ IPKQT IL + V A +L C+YPFIR VDDLFNISTEL VT + I Q++V K+GG+ E+RW+ ++I++ F A +F S+V PLRRLA DPLAA+KRNYADRVLLSR E ST +SG+S R +S+DE G P A + GS G T+ G GV+ D V P W T+ + + + + +GS + +RG G XXX R++MEVWDFERL TPLLAAAFED+S++ALCHESVLFLSEVSRY +NDD++TPT G P+Q+ FCYITDTFIKAG+ EEVNISD D+K I+ Y KG+ FE+ ++E RRMVF +Y+EV++MLEANLLRRFL TDQFKSVR QRE+V AMMDSP
Sbjct: 48 DPSDLFPSYNRTDKALALVRLGLGCCFIVLGTYALVRFYRSRWILDIRTRSAHL-VTLQGVSLLLSMLVTVNGATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKSALPWLIPERNYLAVLLLASIGILAIPIYHEYTLEVWDAIPKQTSILKAQARVLAVMLVCIYPFIRNVDDLFNISTELITVTVTIVVVTIVQEVVDKWGGNFEQRWLTSNISVVFVAVLFCISIVAPLRRLALDPLAATKRNYADRVLLSRTESHST--RSASGISPERAGRSSRIVDDSDDEVAFEDEELGGVPGMDTTAAAGVGGGSTGKVATSS--AVVGSGVITTSTADANVVAPRTWKGREMTIANGSTSVPKGSGSTGKRRDAVQRGQRGRGXXXXXXXXXXXXPSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRY------------------QNDDYATPTNAAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSP 611
BLAST of mRNA_D-herbacea_F_contig114.1082.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 504 bits (1299), Expect = 1.190e-170 Identity = 292/541 (53.97%), Postives = 363/541 (67.10%), Query Frame = 1
Query: 292 RCVHLLVMIGGICVVFTFFVAINSSLNIIWDSGLRWFWSSLLLFFITPVFLGSYICRALRLAVVFHPRAKRALPWLIPERNYICVLLILGVAMLTVPIYHEYTLKIWEIIPKQTDILVTISLVFAGILACLYPFIRKVDDLFNISTELAAVTALTLFFAIGQKLVAKYGGDAERRWIGNHINLFFSAAVFGASVVDPLRRLAFDPLAASKRNYADRVLLSRREGRSTGRTGSSGLSSGR--------VESEDEGRPARLEEGSRGTRPTNEDDRAEGD-------GVVGR---------VDDYVA----NPWFATSATVYSANHNHRQRNGSVNHSQR----------------RGSAGXXXXXARDDMEVWDFERLATTPLLAAAFEDFSRKALCHESVLFLSEVSRYVERLGKLEGGTYRSFITYRNDDFSTPTPGG--AGPSQYNAFCYITDTFIKAGSREEVNISDTDKKRIMLWYHKGQNWFEQEDDEGRRMVFGPAYVEVRNMLEANLLRRFLRTDQFKSVRAQREHVTAMMDSP 1776
R HL VM+ G+CV+ T VA+N S+N++WDSGL WFW SLLLFFI+P GSYICRALRLAVVFHPRAKRALPWLIPERNY+ VLL++ V M+ +PIY EYTL++WEIIPKQT IL T +LVFA LAC+YPFIR VDDLFNIS EL VT + A+ QK A++GG E+RW+GN+I++F +A +FG S+VDPLRRLA DPLAA+KRNYADRVLLSR ST RT +SG+SSGR SE+E ARLEEG G ++ GD VVG +D VA N + +V++ + + S+ ++R RG G R++MEVW+FERLA TPLLA AFED+S++ALCHESVLFL+EVSRY +++D++TPT + PSQ+ FCYIT+TFIKAGS EEVNISD DKKRI+ Y KG+ FE ++E RR++FG AY+EV++MLEANLLRRFL TD+FKSVR QRE+V MMDSP
Sbjct: 3 RSAHL-VMVEGVCVLLTMVVAVNGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMVVLLVVSVGMMAIPIYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELLLVTVAIVCLAVVQKAAAEWGGVYEQRWVGNNISIFIAAVLFGISIVDPLRRLAMDPLAATKRNYADRVLLSRTAPDSTVRT-ASGVSSGRSRDPSRIRANSEEE---ARLEEGDLGGVLDKDETTTAGDVSNVVASAVVGNGVITTSTADTNDAVAAGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRGGGGGRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRY------------------QHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMDSP 520
BLAST of mRNA_D-herbacea_F_contig114.1082.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 481 bits (1239), Expect = 2.040e-160 Identity = 287/594 (48.32%), Postives = 362/594 (60.94%), Query Frame = 1
Query: 142 IDISSFVPSYTETDKDLALFRLILACSFILLGVISLTQFYRSRWILDIRTRCVHLLVMIGGICVVFTFFVAINSSLNIIWDSGLRWFWSSLLLFFITPVFLGSYICRALRLAVVFHPRAKRALPWLIPERNYICVLLILGVAMLTVPIYHEYTLKIWEIIPKQTDILVTISLVFAGILACLYPFIRKVDDLFNISTELAAVTALTLFFAIGQKLVAKYGGDAERRWIGNHINLFFSAAVFGASVVDPLRRLAFDPLAASKRNYADRVLLSRREGRSTGRTGSSGLSSGR--------VESEDEGRPARLEEGSRGTRPTNEDDRAEGDG----------VVGRV------------------DDYVANPWFATSATVYSANHNHRQRNGSVNHSQRRGSAGXXXXXARD----------DMEVWDFERLATTPLLAAAFEDFSRKALCHESVLFLSEVSRYVERLGKLEGGTYRSFITYRNDDFSTPTPGGAG---PSQYNAFCYITDTFIKAGSREEVNISDTDKKRIMLWYHKGQNWFEQEDDEGRRMVFGPAYVEVRNMLEANLLRRFLRTDQFKSVRAQREHVTAMMDSP 1776
+++SS PSYT TDK LAL RL + C FI+LG +L +FYRS+WILDIRTR +L VM+GG+ + T V +N S ++WD G WFW SLLLFFI+P GSYICRALRLAVVFHPR KRALPWLIPE NY+ VLL+ V ML +PIYHEYTL +W+ I KQT+IL + V A LAC+YPFIR VDDLF+ISTEL VTA T+ +++ ++ G ERRW N++++ F +FG S++ PLRRLA DPLAA++ NYA+RVL +R E ST R +SG SSG E EDE LEEG G E +G +G+ D N T+AT + +N N G+ RRG + RD D+++WDFER+ TPLLA AFED+S+KALCHES LFLSEVSRY +N D++ T +G P+Q+ FCYITDTFIKAGS EEVNISD ++K I+ YHKG+ FE ++E RRM+F AY+ V+ MLEANLL RFL TD+FKSV Q+E M+DSP
Sbjct: 36 LNLSSLAPSYTRTDKALALVRLGVGCCFIVLGTCALVRFYRSKWILDIRTRSAYL-VMVGGVAGILTMLVTVNDSTTVVWDIGFDWFWISLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLIPEHNYMVVLLVASVGMLAIPIYHEYTLGVWDAISKQTNILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTA-TIVLITSEEVDGQWWGPYERRWFANNMSVVFMIILFGVSIIAPLRRLASDPLAATRHNYANRVLPNRTEPHSTARR-ASGFSSGLDCESSMMCSEREDE---TTLEEGKLGEALATGITTTEREGGSAGYVAASATIGKAVTTSSADANGAVAPHTWTDREPTNSSVVTTATWFVSNDN--GAGGNRLDGVRRGQSEIGLDRGRDGGRRSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRY------------------QNGDYAMATRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSVEMQKEDTQVMVDSP 603
BLAST of mRNA_D-herbacea_F_contig114.1082.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 466 bits (1200), Expect = 5.120e-156 Identity = 264/545 (48.44%), Postives = 333/545 (61.10%), Query Frame = 1
Query: 142 IDISSFVPSYTETDKDLALFRLILACSFILLGVISLTQFYRSRWILDIRTRCVHLLVMIGGICVVFTFFVAINSSLNIIWDSGLRWFWSSLLLFFITPVFLGSYICRALRLAVVFHPRAKRALPWLIPERNYICVLLILGVAMLTVPIYHEYTLKIWEIIPKQTDILVTISLVFAGILACLYPFIRKVDDLFNISTELAAVTALTLFFAIGQKLVAKYGGDAERRWIGNHINLFFSAAVFGASVVDPLRRLAFDPLAASKRNYADRVLLSRREGRSTGRTGSSGLSSGRVESEDEGRPARLEEGSRGTRPTNEDDRAEGDGVVGRVDDYVANPWFATSATVYSANHNHRQRNGSVNHSQRRGSAGXXXXXARDDMEVWDFERLATTPLLAAAFEDFSRKALCHESVLFLSEVSRYVERLGKLEGGTYRSFITYRNDDFSTPTPGGAGPSQYNAFCYITDTFIKAGSREEVNISDTDKKRIMLWYHKGQNWFEQEDDEGRRMVFGPAYVEVRNMLEANLLRRFLRTDQFKSVRAQREHVTAMMDSP 1776
+D+SS VPSYT TDK LALFRL + C FI+LG +L +FYR + ILDIRTR +L VM+GG+ + T V +N + +IWD+G WFW+SL LFFI+P G YICRALRLAVVFHPR KRALPWLIPERNY+ VLL+ V ML +PIYHE+TL +W+ I KQT IL + V A LAC+YPFIR VDDLF+ISTEL VTA I Q++ +GG ERRW+ N++++ F +FG S+V PLRRLA DP AA++RNYA+RVL E S G RL+ RG +D R R+G G + D+++WDFER+ TPLLA AFED+S++ALCHES LFLSEVSRY + G Y + I + G + P+Q+ FCYITDTFIKAGS EEVNISD ++K I+ YHKG+ FE +D RRM+F AY+ V+ MLEANLL RFL TD+FKS+ Q+E+ M+DSP
Sbjct: 36 LDLSSLVPSYTRTDKALALFRLGVGCCFIVLGTCALARFYRLKQILDIRTRSAYL-VMVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLFLFFISPALFGRYICRALRLAVVFHPRVKRALPWLIPERNYMVVLLVASVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIGLITIVQEIDGLWGGCYERRWLANNLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVLPDHTEPHSIGGN-------------------RLDAVRRGQSERGDD----------------------------------RGRDG-----------GRRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRY-------QNGDYATTIR--------ASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSP 500
BLAST of mRNA_D-herbacea_F_contig114.1082.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 400 bits (1027), Expect = 1.820e-129 Identity = 266/550 (48.36%), Postives = 329/550 (59.82%), Query Frame = 1
Query: 292 RCVHLLVMIGGICVVFTFFVAINSSLNIIWDSGLRWFWSSLLLFFITPVFLGSYICRALRLAVVFHPRAKRALPWLIPERNYICVLLILGVAMLTVPIYHEYTLKIWEIIPKQTDILVTISLVFAGILACLYPFIRKVDDLFNISTELAAVTALTLFFAIGQKLVAKYGGDAERRWIGNHINL--------FFSAAVFGASVVDPLRRLAFDPLAASKRNYADRVLLSRREGRSTGRTGSSGLSSGRV--------ESEDEGRPARLEEGSRGTRPTNEDDRAEGDG-----------VVGR----VDDYVAN------PWFATSATVYSANHNHRQRNGSVNHSQRR-----GSAGXXXXXA-----------RDDMEVWDFERLATTPLLAAAFEDFSRKALCHESVLFLSEVSRYVERLGKLEGGTYRSFITYRNDDFSTPTPGGAG--PSQYNAFCYITDTFIKAGSREEVNISDTDKKRIMLWYHKGQNWFEQEDDEGRRMVFGPAYVEVRNMLEANLLRRFLRTDQFKSVRAQREHVTAMMDSP 1776
R HL V + G+ ++F+ V +N + I+WDSGL WFW SLLLFF++P GSYICRALRLAVVF+PRAKRALPWLIPERNY+ VLL+ + +L +PIY EYTL++W+ IPKQT IL T + V A +L C+YPFIR VDDLFNIS EL VT +T+ + + + H+ + + SVV PLRRLA DPLAA+KRNYADRVLLSR E ST +SG+S R +SEDE E+ G P + A G G VVG AN PW T+ AN + GS + +RR G G XXX R++MEVWDFERL TPLLAAAFED+S++ALCHESVLFLSEVSRY +NDD++TPT AG P+Q+ FC+ITDTFIKAG+ EEVNI +K I+ Y KG+ FE+ ++E RRMVF +Y+ V++MLEANLLRRFL TDQFKSVR QRE+V AMMDSP
Sbjct: 19 RSAHL-VTLQGVSLLFSMLVTVNDATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKRALPWLIPERNYLAVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQARVLAVMLVCIYPFIRNVDDLFNISKELITVT-VTIAVVTCEAHSFVHRSTHVESCLQQHVPPTTKRFPYPMSPSNLSTRSVVAPLRRLALDPLAATKRNYADRVLLSRTESHST--RSASGISPERAGGSSRIVDDSEDE---VAFEDEELGGVPGFDTTAAAGVGGGSTGKVATSAVVGSGVITTSSADANGAVAPCPWKGRELTI--ANGSTSVPKGSSSTGKRRDAVQRGQRGRGXXXXXXXXXXXXXSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRY------------------QNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSP 537
BLAST of mRNA_D-herbacea_F_contig114.1082.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI) HSP 1 Score: 348 bits (894), Expect = 1.440e-110 Identity = 235/540 (43.52%), Postives = 297/540 (55.00%), Query Frame = 1
Query: 307 LVMIGGICVVFTFFVAINSSLNIIWDSGLRWFWSSLLLFFITPVFLGSYICRALRLAVVFHPRAKRALPWLIP----ERNYICVLLILGVAMLTVPIYHEYTLKIWEIIPKQTDILVTISLVFAGILACLYPFIRKVDDLFNISTELAAVTALTLFFAIGQKLVAKYGGDAERRWIGNHINLFFSAAVFGASVVDPLRRLAFDPLAASKRNYADRVLLSRREGRSTGRT--GSSGLSSG-----RVESEDEGRPARLEEGSRGTRPTNEDDRAEG-DGVVGRVDDYVANPWFATSATVYSAN-----------------------------HNHRQRNGSVNHSQRRGSAGXXXXXA------RDDMEVWDFERLATTPLLAAAFEDFSRKALCHESVLFLSEVSRYVERLGKLEGGTYRSFITYRNDDFSTPTPGGAGPS---QYNAFCYITDTFIKAGSREEVNISDTDKKRIMLWYHKGQNWFEQEDDEGRRMVFGPAYVEVRNMLEANLLRRFLRTDQFKSVRAQREHVTAMMDSP 1776
LVM+ G+C + T V +NSS+N++WD GL +FW SLLLF + P LGSYICR LRLAVVFHPRAKRALPWLIP + Y Y + L FA LAC +PFIR VDDLF+IS E+ VTA + AI Q +V K+GG ERRWI +++ F A +FG S+VDPLRRLAFDPLAA++ N+A+R+LLSR E ++ R G S + G R +SE+E ARLEEG R P + A G DG G V A AT+A A+ ++ R R G+ QR +G + R++MEVWDFER+A+TPLLAAAFED+S++ALCHESVLFLSEVSRY +N+++ PT + S Q+ +FCYITDTFIKAGS EEVNI RM+F AY +V+NMLEANL+ RFL TD+FK+VR QRE++ AMM SP
Sbjct: 7 LVMVEGVCALLTMLVTLNSSINVVWDCGLDYFWVSLLLFLVVPTLLGSYICRVLRLAVVFHPRAKRALPWLIPGGRSDAGY----------------YPDDDLS-----------------AFAVALACTFPFIRNVDDLFSISKEIIIVTAAVVILAIEQNVVDKWGGVYERRWIDKSVSILFVAVLFGVSIVDPLRRLAFDPLAATQHNHANRILLSRTEPHNSVRRELGFSSVIGGGSQRTRGDSEEE---ARLEEGQREGVPGKDTTTAAGGDGDTGDVPTSAAIGRGATTAPTADADGAVAPCTWNEREPTNSSVVAEGSSSVSNDNSTRGRRGAFQRVQRARGSGRDRGCSSRSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRY------------------QNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNI---------------------------RMIFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSP 465
BLAST of mRNA_D-herbacea_F_contig114.1082.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 338 bits (866), Expect = 8.590e-108 Identity = 210/491 (42.77%), Postives = 263/491 (53.56%), Query Frame = 1
Query: 313 MIGGICVVFTFFVAINSSLNIIWDSGLRWFWSSLLLFFITPVFLGSYICRALRLAVVFHPRAKRALPWLIPERNYICVLLILGVAMLTVPIYHEYTLKIWEIIPKQTDILVTISLVFAGILACLYPFIRKVDDLFNISTELAAVTALTLFFAIGQKLVAKYGGDAERRWIGNHINLFFSAAVFGASVVDPLRRLAFDPLAASKRNYADRVLLSRREGRSTGRTGSSGLSSGRVESEDEGRPARLEEGSRGTRPTNEDDRAEGDGVVGRVDDYVANPWFATSATVYSANHNHRQRNGSVNHSQRRGSAGXXXXXARDDMEVWDFERLATTPLLAAAFEDFSRKALCHESVLFLSEVSRYVERLGKLEGGTYRSFITYRNDDFSTPTPGGAG---PSQYNAFCYITDTFIKAGSREEVNISDTDKKRIMLWYHKGQNWFEQEDDEGRRMVFGPAYVEVRNMLEANLLRRFLRTDQFKSVRAQREHVTAMMDSP 1776
M+GG+ + T V +N + +IWD+G WFW+SLLLFFI+P GSYICRALRLAVVFHPR KRALPWL+PERNY+ VLL+ V ML +PIYHE+TL +W+ I KQT IL + V A LAC+YPFIR VDDLF+ISTEL VTA IG + ++RNYA+RVL E S G + G+ E RG DDR G R +H+Q D+++WDFER+ TPLLA AFED+S++ALCHES LFLSEVSRY +N D++T +G P+Q+ FCYITDTFIKAGS EEVNISD ++K I+ YHKG+ FE + E RRM+F AY+ V+ MLEANLL RFL TD+FKS+ Q+E+ M+DSP
Sbjct: 1 MVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLVPERNYMVVLLVSSVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTA-----TIGL-------------------------------------------ITTTRRNYANRVLPDHTEPHSIGGNRLDAVRRGQTE--------------RG------DDRGRDGGRRSR---------------------SHKQ-----------------------DIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRY------------------QNGDYATTKRASSGSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSP 361
BLAST of mRNA_D-herbacea_F_contig114.1082.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE) HSP 1 Score: 312 bits (799), Expect = 2.410e-96 Identity = 225/505 (44.55%), Postives = 277/505 (54.85%), Query Frame = 1
Query: 319 GGICVVFTFFVAINSSLNIIWDS--GLRWFWSSLLLFFITPVFLGSYICRALRLAVVFHPRAKRALPWLIPERNYICVLLILGVAMLTVPIYHEYTLKIWEIIPKQTDILVTISLVFAGILACLYPFIRKVDDLFNISTELAAVTALTLFFAIGQKLVAKYGGDAERRWIGNHINLFFSAAVFGASVVDPLRRLAFDPLAASKRNYADRVLLSRREGRSTGRTGSSGLSSGRVESEDEGRPA--RLEEGSRGTRPTNEDDRAEGDGVVGRVDDYVANPWFATSATVYS----ANHNHRQRNGS----------VNH-SQRRGSAGXXXXXA----------RDDMEVWDFERLATTPLLAAAFEDFSRKALCHESVLFLSEVSRYVERLGKLEGGTYRSFITYRNDDFSTPTPGGAGPSQYNAFCYITDTFIKAGSREEVNISDTDKKRIMLWYHKGQNWFEQEDDEGRRMVFGPAYVEVRNMLEANLLRRFLRTDQFKSVRAQR 1746
G +V ++ A+N SL I+W + L WFW SLLLF + P+ GSYICRALRLAV+FHPRAK+ALPWLIPERN++ L VA L VPIY + TL++W KVDDLFNIS EL VT L L AIG K Y D W G ++N F +AAVFG SVV PLR LA DPLA SK+ DR +L+RR+ RS + S+ ++ S R A +LEEG G DD + ++Y AN + G +N + R G AGXXXXX + +E WDFERLA PL+AAAFE ++RKALCHE VLFL EVSRY ++ DF P G +GPSQY AFC I D FI+ GSREEV+IS ++KR+M HKG FE +E RR+VF AY+EV+ MLE NLLRRFL+TD+FKSVRAQR
Sbjct: 2 AGSSMVVSYVAAVNQSLFILWGATYSLDWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSATVVAFLIVPIYQDMTLEVW-----------------------------KVDDLFNISRELIIVTILFLILAIGIKCGLYYEVDM---WTGGNLNFFITAAVFGVSVVGPLRLLAVDPLAGSKQRCMDRAVLARRDTRSEDVSYSAKATADIRGSSRAVRVASRKLEEGLYGDGVDENDDDGCDTTPXXXXXXXXXXXXXXXATSLYDEPPPANLSPSPSPGDPGAGNWQYQGINFCTSRGGGAGXXXXXXXXXXXXXXXXEEMVEAWDFERLARKPLVAAAFEAYTRKALCHECVLFLREVSRY------------------QSGDFPEPA-GLSGPSQYQAFCRINDVFIRPGSREEVSISGVERKRLMELAHKGDVLFEAGTEEERRLVFARAYLEVKTMLEDNLLRRFLQTDRFKSVRAQR 455
BLAST of mRNA_D-herbacea_F_contig114.1082.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI) HSP 1 Score: 299 bits (766), Expect = 4.490e-95 Identity = 143/208 (68.75%), Postives = 171/208 (82.21%), Query Frame = 1
Query: 352 AINSSLNIIWDSGLRWFWSSLLLFFITPVFLGSYICRALRLAVVFHPRAKRALPWLIPERNYICVLLILGVAMLTVPIYHEYTLKIWEIIPKQTDILVTISLVFAGILACLYPFIRKVDDLFNISTELAAVTALTLFFAIGQKLVAKYGGDAERRWIGNHINLFFSAAVFGASVVDPLRRLAFDPLAASKRNYADRVLLSRREGRSTG 975
A+N ++NI+WDSGL WFW SLLLFF++P GSYICRALRLAVVFHP+AKRALPWLIPERNY+ VL++ ML +P+YHEYTL++WEIIPKQTDIL+ +S+ FA + AC+YPFIR VDDLF+IS ELA VTA + A+GQKL YGG ERRW+GN++ L F+A VF SVVDPLRRLAFDPLAA+KRNYADRVLLSR R+ G
Sbjct: 4 AVNGAINIVWDSGLDWFWVSLLLFFVSPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYVAVLMVASCGMLAIPLYHEYTLEVWEIIPKQTDILIWVSIAFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLAVGQKLEGDYGGVYERRWLGNNLFLLFAAVVFSVSVVDPLRRLAFDPLAATKRNYADRVLLSRGPCRAVG 211
BLAST of mRNA_D-herbacea_F_contig114.1082.1 vs. uniprot
Match: A0A6H5LA03_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE) HSP 1 Score: 280 bits (716), Expect = 2.450e-82 Identity = 218/586 (37.20%), Postives = 265/586 (45.22%), Query Frame = 1
Query: 292 RCVHLLVMIGGICVVFTFFVAINSSLNIIWDSGLRWFWSSLLLFFITPVFLGSYICRALRLAVVFHPRAKRALPWLIPERNYICVLLILGVAMLTVPIYHEYTLKIWEIIPKQTDILVTISLVFAGILACLYPFIRKVDDLFNISTELAAVTALTLFFA----------------------------------------------------------------------------IGQKLVAKYGGDAERRWIGNHINLFFSAAVFGASV-VDPLRRLAFDPLAASKRNYADRVLLSRREGRSTGRTGSSGLSSGRVESEDEGRPARLEEGSRGTRPTNEDDRAEGDGVVGRVDDYVANPWFATSATVYSANHNHRQRNGSVNHSQRRGSAGXXXXX-----------ARDDMEVWDFERLATTPLLAAAFEDFSRKALCHESVLFLSEVSRYVERLGKLEGGTYRSFITYRNDDFSTPTPGGAG---PSQYNAFCYITDTFIKAGSREEVNISDTDKKRIMLWYHKGQNWFEQEDDEGRRMVFGPAYVEVRNMLEANLLRRFLRTDQFKSVRAQREHVTAMMDSP 1776
R HL M+GG+ V+ A+N +LNI+WDSGL WFW SLLLFF++P GS ICRALRLAVVFH RAKRALPWLIP TDIL+ S+ FA + AC+YPFIR VDDLF+IS ELA VTA T+ A +GQKL GG ERRW+GN++ LFF+A VF +D +L R GR + + PA + G T +DD A G A + S++ R ++ QR + G XX R MEVW FERLA TPLLA AFED+S++ALCHESVLFLSEVS Y+NDD++T T +G P+Q+ CYITDTF KAGS EEVN SD DKK I FE + F AY++V++MLEANLLRRFL TD+FKSVR QRE+V AMMDSP
Sbjct: 133 RSAHL-AMLGGVAVILWMLTAVNGALNIVWDSGLDWFWISLLLFFVSPALFGSCICRALRLAVVFHSRAKRALPWLIP-----------------------------------TDILIWESIAFAVVQACIYPFIRNVDDLFSISKELAIVTAATILLAGGPRMPDSAAALAPLDEYQYPAVGASSRASALTSRFARTPTTLHPSVLNPPPPVGTPSPPSPLHAALVLDALAAPPVGQKLEGDCGGVNERRWLGNNLFLFFAAVVFSVECGIDDXXXXXXX------------XMLEEGAPRGNGRKNPAIV------------PADDDTGMAAV--TGDDDGATA-AXXGXXXXAAPARGLARGISSLSSHSTGGNRRDALQRGQRNSTCGHGGXXXXXXXXXXXXXGRGVMEVWSFERLARTPLLAVAFEDYSKRALCHESVLFLSEVS------------------WYQNDDYATQTRASSGSSCPTQFGTLCYITDTFTKAGSPEEVNTSDADKKAI----------FEND--------FSLAYLKVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSP 619 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig114.1082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig114.1082.1 >prot_D-herbacea_F_contig114.1082.1 ID=prot_D-herbacea_F_contig114.1082.1|Name=mRNA_D-herbacea_F_contig114.1082.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=593bp MSGPPSSVDIGGDSSSSSTSQTYYEKKYGGGGTSSTSAGGPPPGIDISSFback to top mRNA from alignment at D-herbacea_F_contig114:591713..613758+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig114.1082.1 ID=mRNA_D-herbacea_F_contig114.1082.1|Name=mRNA_D-herbacea_F_contig114.1082.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=22046bp|location=Sequence derived from alignment at D-herbacea_F_contig114:591713..613758+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig114:591713..613758+ >mRNA_D-herbacea_F_contig114.1082.1 ID=mRNA_D-herbacea_F_contig114.1082.1|Name=mRNA_D-herbacea_F_contig114.1082.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=3558bp|location=Sequence derived from alignment at D-herbacea_F_contig114:591713..613758+ (Desmarestia herbacea DmunF female)back to top |