mRNA_D-herbacea_F_contig1.102.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1.102.1
Unique NamemRNA_D-herbacea_F_contig1.102.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig1.102.1 vs. uniprot
Match: D7FUD5_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD5_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 3.850e-34
Identity = 77/149 (51.68%), Postives = 96/149 (64.43%), Query Frame = 1 
Query:  316 AEVAAPWVEDSVKARLRELLSDEGQDGEGNEGVATRPRPTPTVIRPRPEGAAEAEMGLIESIRLRQSSRAACPECRSDLLRSTHTFNSDGTPLGLSNSSSHHSASIMLGLNPADTATTATATKNKSKKLHPCSAHRHRSSPGEGGLPGL 762
            AEVAAPWVEDSVKA ++ELL+   Q  +      +  RPTP V+RPRP+GAAE E GL+E IR +++S A CPEC+ D+LR TH FNSDG P+GLS  S+H +  I    +P               K+  CSAHR R+ PGEGGLPGL
Sbjct:  490 AEVAAPWVEDSVKASMQELLAPRRQPSKEGSDATSHTRPTPAVVRPRPKGAAEEEAGLMEFIRSQRNSMAECPECQQDMLRQTHAFNSDGVPIGLS--SAHGTYRISSAGSPG--------------KVKMCSAHRARAQPGEGGLPGL 622
[Close]
BLAST of mRNA_D-herbacea_F_contig1.102.1 vs. uniprot
Match: A0A6H5KJE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJE3_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 7.990e-32
Identity = 74/149 (49.66%), Postives = 95/149 (63.76%), Query Frame = 1 
Query:  316 AEVAAPWVEDSVKARLRELLSDEGQDGEGNEGVATRPRPTPTVIRPRPEGAAEAEMGLIESIRLRQSSRAACPECRSDLLRSTHTFNSDGTPLGLSNSSSHHSASIMLGLNPADTATTATATKNKSKKLHPCSAHRHRSSPGEGGLPGL 762
            AEVAAPWVEDSVKA ++ELL+   Q  E      +  RPTP V+RPRP+GAAE E GL+E IR +++S A CPEC+ D+LR TH  NS+G P+G+S  S+H +  I    +P               K+  CSAHR R+ PG+GGLPGL
Sbjct:  662 AEVAAPWVEDSVKASMQELLAPRSQPSEEGSDCTSHTRPTPAVVRPRPKGAAEEEAGLMEFIRSQRNSVAECPECQRDMLRQTHASNSNGVPIGVS--SAHGTYRISSSRSPG--------------KVKMCSAHRARAQPGKGGLPGL 794
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUD5_ECTSI3.850e-3451.68Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KJE3_9PHAE7.990e-3249.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1contigD-herbacea_F_contig1:2670990..2679005 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score143.7
Seed ortholog evalue1.2e-31
Seed eggNOG ortholog2880.D7FUD5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size766
Cds size765
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1.102.1prot_D-herbacea_F_contig1.102.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1 2670990..2679005 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927396.286138-CDS-D-herbacea_F_contig1:2670989..26710761622927396.286138-CDS-D-herbacea_F_contig1:2670989..2671076Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2670990..2671076 +
1690790146.4410305-CDS-D-herbacea_F_contig1:2670989..26710761690790146.4410305-CDS-D-herbacea_F_contig1:2670989..2671076Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2670990..2671076 +
1622927396.296862-CDS-D-herbacea_F_contig1:2673165..26732771622927396.296862-CDS-D-herbacea_F_contig1:2673165..2673277Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2673166..2673277 +
1690790146.4534373-CDS-D-herbacea_F_contig1:2673165..26732771690790146.4534373-CDS-D-herbacea_F_contig1:2673165..2673277Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2673166..2673277 +
1622927396.3084824-CDS-D-herbacea_F_contig1:2674713..26748351622927396.3084824-CDS-D-herbacea_F_contig1:2674713..2674835Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2674714..2674835 +
1690790146.4633482-CDS-D-herbacea_F_contig1:2674713..26748351690790146.4633482-CDS-D-herbacea_F_contig1:2674713..2674835Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2674714..2674835 +
1622927396.319516-CDS-D-herbacea_F_contig1:2674993..26751131622927396.319516-CDS-D-herbacea_F_contig1:2674993..2675113Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2674994..2675113 +
1690790146.481378-CDS-D-herbacea_F_contig1:2674993..26751131690790146.481378-CDS-D-herbacea_F_contig1:2674993..2675113Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2674994..2675113 +
1622927396.3286016-CDS-D-herbacea_F_contig1:2677245..26773261622927396.3286016-CDS-D-herbacea_F_contig1:2677245..2677326Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2677246..2677326 +
1690790146.5002313-CDS-D-herbacea_F_contig1:2677245..26773261690790146.5002313-CDS-D-herbacea_F_contig1:2677245..2677326Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2677246..2677326 +
1622927396.3373811-CDS-D-herbacea_F_contig1:2678762..26790051622927396.3373811-CDS-D-herbacea_F_contig1:2678762..2679005Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2678763..2679005 +
1690790146.511845-CDS-D-herbacea_F_contig1:2678762..26790051690790146.511845-CDS-D-herbacea_F_contig1:2678762..2679005Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 2678763..2679005 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1.102.1

>prot_D-herbacea_F_contig1.102.1 ID=prot_D-herbacea_F_contig1.102.1|Name=mRNA_D-herbacea_F_contig1.102.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=255bp
SRRTPLHHAGRWGSPGTSVLLLDAGADIEARDEELARTPLHFSSRSGGLG
TTLVLLQNGADLDAKTVAGNTPLHLACDRGLVENVKLLLEWGANRKVLNE
AGNVPAEVAAPWVEDSVKARLRELLSDEGQDGEGNEGVATRPRPTPTVIR
PRPEGAAEAEMGLIESIRLRQSSRAACPECRSDLLRSTHTFNSDGTPLGL
SNSSSHHSASIMLGLNPADTATTATATKNKSKKLHPCSAHRHRSSPGEGG
LPGLV
back to top

mRNA from alignment at D-herbacea_F_contig1:2670990..2679005+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1.102.1 ID=mRNA_D-herbacea_F_contig1.102.1|Name=mRNA_D-herbacea_F_contig1.102.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=8016bp|location=Sequence derived from alignment at D-herbacea_F_contig1:2670990..2679005+ (Desmarestia herbacea DmunF female)
TCTCGAAGAACGCCGTTGCATCATGCTGGTCGATGGGGGTCGCCGGGCAC
GAGCGTTTTGCTTCTGGATGCTGGCGCTGATATCGAGGTACAACGGACGG
TGTACAGTATTTTCTTTTTCTGGGGTTTTTAGTTGTGGCGAGGCATGTGC
ACCGGGGGGGGGGAGGGAGACATCTACACCTGTGACCACGGCTTGCTCAG
ATATTATAGGCGCGCTGAGCGATGATCAGAGTAGGAGGGCTCCTGTGAGC
TGGGCCAGGTAGTTAAAACGATGGATACTGTAATAATATAAATTAATTGA
AAAGTACATGGGGTTGACACTGTTGTTGTTGTTGTTGTTGTGTTACCTTA
AAAACCGCCCTTCCTACCCTACCCTACCCTACCCTACCCTACCCTACCCT
ACCCTACCCTACCCTACCCTACCCTACCCTACGACATCCTGTACTACAGT
ACTACTGTACAGTACTACAGTACTACAGTACAGTAGTAACGTACTGTAGT
AACGTACAGTAGTAACGTACTGTACTAACGTACTGTACTAACGTACTGTA
CTAACGTACTCAGAGTCTGTACTGATTCTTCCATCCTAGAGAGGTACGAA
ATTCCGTGGTCACAAGCTACATCTTAAATAACACCAAATCGCAAATTGAA
CAATAAAAACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAA
AAGAAAGAGGAAAAACAGGCAGGAACGCAAGGAACCTCTAAGGAGATTAT
ACCCTATTATACTATTAGTTTTTTTTTTTTTTTTTTCCGTCCCATTTATT
ATCTTCGCCCGATTCTTTGTCTAGCTCCATCTCTCTTCGTAACTCAGATC
CGGGGTCACATAGCAGGCGCTCCTCCCTCCTTCCCACTACGCTAGTACGT
GCCTACTTTTTTATCGCGAGAAGAGTGCAGCGCTTTCTTCCCTCGTCGAC
TTTCATCGAATTGTGCTTACTCACGCTCTCGCGTTTTCCGTGACGAAAGA
TGGCACAGCAAAGTGCCACCGGGAATTGAACTCCCAACTTCCGCCAACGG
AGGCGAACGCTTAGTCACGTAGACCATCGCGTCACCCATGTCATATTAGG
ATGGCTTTTATTTTTAGGATGGGCTGCGTCGTTCAAATTCTCGAAAAATG
TATTTTTGTTCGACAATAGATATTTTAATAATAGAACACCCGCCACTTGA
AACATACCAGGTATTCAACACTGGTTAGAGCGTGTCCCTCTCTGGTCTAG
TGGTTAGTGCGTGACCCTCTGTTGGGCGGAGGTTCGGGGTTCGATTCCTG
CTGAAAAAAAAACAAAATTGGCACGTTTCTGTGCCATCTTCCGTCGCGGG
AAGCGCGAGAGCGCGAGTAAGCAAAATTCGATGAAAATCGACGAGCTATA
ATACTTGCTGTATGGGGTTTCCGAAGCCTGCAAGGCATGACTGCGGGGAG
GAGAAAAAGGGAAGAGACCTGTGACCACGGCCTGTGACCACGTCTTGCTC
AGATACTTCGTAGGTGCGCTAACGATGAGCTCTCTGGGTAGTTACAGGTG
ATGAATAGATACGAACAAAAAAAAAAAAAATCGGCCGTTACGTGACGTTC
CAAACCGGTTGGGGGGTTATTACTTCGAGTATAACCATAGTATAGGGGGT
GACGCTCTAGTCTATGTGACTTAGTGTTCGCCTCTGTTGGCGGAAGTTCG
GGATTCGATTCTCGATGGAAACAAAATTACATTTTTCTGTTCCAATCTTC
CATCGCGGACAGCGCGAGAGCGTGGGTGAGTAAGCACAACAATTCGATGA
ATGCCGACGAGGAAAGAAAGAGCTGCACTCTTTCTCGCGACAAGACTGTG
GGCATGTATACCGTAGTGGGGAAGGGGGAAGAAGAGCCTACGCTGTGACC
CCGGATCTGAGTTACGAAGAGAGATGTATGGAGCTAGAGAAAGAATAGGA
CGGAGAAGATAATAAATGGGACGGGAAAAAAAAAAAAAATCTTACTTGGT
TAGACTATAGGGTTACTAGTAGAGTTTTCTTAAAGCTGCTGCGAACAGGC
CTACGTTGTTACAAATCATCTATTAAAGCGAGAGTCCTTAAGATACGATC
TACACAAACACAAAAACGCTTAAGGCGGGTCGCCACAATTCGTTTATCCC
TTTTCTGTTTGACGTGGTTTTACCAGGCACGAGACGAAGAACTTGCACGC
ACGCCTCTGCACTTCTCTAGCAGATCCGGAGGGTTGGGGACCACCCTGGT
GCTTCTCCAGAACGGCGCAGATTTGGACGCGAAGACCGGTGAACAACTGA
CTGACTACTGTTGTATGATTTATTTTTAATTAGAAATAAATGGGACAGGG
GTGGCGCAGTGGTCTAATGGTTAGGGTGTGTTGCTTCTGTTGGTGGAAGT
TAGGGGTTCGATTCCCCGTGGCACTTTTCTGTGTCGTCTTCCGTCGCGGA
AAACGCAAGAGCGCACAATTCGATGAAAGGCCTAACGACCACATCATAAC
CTCGCTAAAGATCCTGTCGTTTTTTTTTTgTTTTTTTGTTTTTCCGTTCC
ATTTGTCCTCCCCGTCTCTCATCAAATAATTAATTAATTATTGTTTATTT
TGCATGAACATATGTTTTCTGTTTACCATGTTTCCGTCGGCGGTCTCGGT
GTAATACAATCGAACGTTGAAAACAAAAACAAAATGTATTTCGCAAACAC
CCTAATAATAAAAAATTCAGTCAACAGATCTTAGATTGGGCGGGGTTCAC
CTTGCGTGCAAGCGCGCGAGCAGAAACTGCCTGTATGATGTATACCACGC
CCACTCTCCCATTCTCCTTTAGCCCCATACTTTTTATTCTCTTCGATAGG
TGTGAAAATACTATAAATATTGCCGCTTTTTTTTATTTCGGGTTGTTTCC
CAATTCTTGGGACACAATGGTTGACATACTGTTGAAATAACAAAGCGGAC
TAACTCTGACGCTAACGCTGACCCTATAACCCAATCAAACGTATATATTT
TGTATTTTTTGGACCAATGAAAAATCAGTGTTTGGTTTGTCGAAGAATCG
GTAATCGTACACACTTTTGATTTAGCAACAATGGTTGAAAGACGGAACTT
TATAGGAACTTTACAACAGAGGTTTTGACTAGCTATTAGTAGTATGTGTG
TGTGTTCGTGTGTCCGCTAGGGTTCGGGGATAGGGTTGGCGGTAGAAATT
TCCGAAACGGCCTGAACAGCCCACGTTGGTACCAATCATACATCATACAT
CATACATCTAATAAGACGAACGTCCTAAAGAGCCGTCCTACAAAAGAAAG
TAGCGTTTTATCAGTTAGACGAAAGTTATGGTTGACCATGCAAACTCGAT
ATAAACATTTTCTACGGTAGGAGATTTCTAACCGCACACTTTTAGCAGTA
GTAGTCTCGATTCAAGAGCGACACAGAGCAAAAACCATGTTTCCTCGTGT
TCGGCGCCGAATGTGTGGATTTTTGTCCCGCCAACTGTGCCGTAGAATTA
ATAGTACCGTGAGTGGTTTATTACCATTAGGGTTACGGCTAGGGGCAGGT
TGGGTCGGCTCGTCTCGGCATACATTGAAATCAATAAAAATAAAAGGTGT
GTCAACCATAGCTTTCGTCTAACTGGTAGACAGTATTCTACAAAAGCGCT
AAGGCGGCTCCCTCGACTCTCCCCTCGTTCCCGATGCCGTTTCGTTTGAT
CCTTGTCGTGGTCCGGCACAACAGTTGCGGGAAATACTCCTTTGCATCTG
GCCTGCGATCGAGGCCTCGTGGAGAACGTTAAGCTCCTCTTGGAGTGGGG
TGCGAACAGAAAGGTCTTGAACGAAGCGGGCAACGTGCCGGCCGAGGTGC
AGTAATACGATATACCATTCGATTTTTGATATGATATAATTTCATTTCAT
TTGATATGATACGGTTTGATGTGGTACGGTGTATAAATAGAAAAGTTTGT
GGTTTAAAACAAAATGTGGGTTTGTGCTGATGACGTGCTGTTGACGGCGT
ACAGGTGGCAGCGCCTTGGGTGGAGGATTCTGTGAAGGCCAGATTGAGAG
AGCTCTTGTCTGATGAGGGGCAAGATGGTGAAGGGAACGAGGGTGTGGCA
ACTCGACCGAGACCGACGCCGACGGTGTGTAAAAATACACGAGCAATTAA
AGCATATCAAATCGGATGAACTATAGATCAAACGAAATCATACTCGAAGT
ATAAAATCAAACTAATGAAATCGTAAATCAGTCAACTCATGTATCAATTA
ACCAATCCATCAATCACGAAATAACGAACAATCGCCCAATCAATAAATCA
ATCACAAGCAATCAAAAACATCCATCCATCCATCCATCCATTACTCAATC
ATTCAACCAGTCAATCACAAACAATCCATCGATCGATTAACCATTCCACC
ACTAAATCAATCACAATCAATCATCAATTCGAGCATTCTAGCAATCAACC
AATCAATCAATAGTTCAATCGTTCAACCACAATCAGTCGCCGTCGCCATC
AAGCAATCACATCAATGCATCCTCTCGTCAAGCAACGAATCAATCATAAT
CATTCGATTAACCGATTAACCTATCGAGCGTTCTAGCAATCAATCACTCA
ATCGATAATTACATCAACCCATCCACCCATCAATCAATCAATCAATCAAT
CAACCAACCAAACATTCTAGCAACCGAAAATTCAAAAAAAAAAATCAGCC
ACGATCATCAATCCATCCATCCATCCATCATGCACTCACAATCAAGCATT
CACAGTCAATCAATGAATCACTCAATACTCCGTTCCCCTCGGCAAGGCCT
GCTGTTCTGCGTGGCTCATAGCGAAGGGGGTAGGTCTTTCTAGCGGGTTT
GAGGCTGGATTCACCCTCAAGGAGTGATACCTTCTTGCTGCTGCCCTGTG
GTCGCGTGTCCAGCGGCGTGCGGTAGAGTTGGGTCGAATTGGTGCGTCAG
GTACAAACGTGCGGATCTGCGGGCCTTTTGGCAACAAGCGGTAGCACAGT
AATGTGCATCCTAAAAATCGTTTGTACGCGGAGGCAGGCGCCACCATAAG
CTAAAAGACGGCACGGTCTAGGATGCTGAGAGGGGACTATGCTGTCCAGA
AGCCGGATTCGCCGCCAAAGTGGGAGGGAGACGAGCGGCGACGAACGGGG
AAGAGCATGGTTGAAGTCACCCTGAGCGTGAACTTTTTTTTCATACGACC
CGCACCTCAAGTGCAAGAAGGGGCTACGTAGCTGAGAGTGGGACCGGCCG
GAAAGGAGCAACAACAAGAGCGTGTGTCCGGAGCAGATCGAGATTGACGG
TGCTGGGGGTGACCATGGAGCGGGTCTAGGCTGGTGGTGCTGGGGGTGGC
CATGGACGACATCACCAGCAGCACACGGGCAAAATCGGCACGGCGACGGC
GCACATCAGGGCTGTAGCAATAATTTCGTTTTTTTGTGGACCTCTTTGGA
GAGGTACTTGTTGATTTCGTTACTGGTTTGTAGAGAGATGCGGTAGAAAT
GCCCGTGCTACCTCGGTGGCCTACGTAGCTGTTGCCTGCGTTGTACCCTT
TATTGTGGAACGCCCCCCTTGCAATATCAGTAACGTGGATACTATGTGCC
TACTATAGACGGCTCGGGAAAGACCTGGTGATTGTCGATTACTTTGGTGG
CTTTGGTTGGTGGTTCTTTTTTCACTGCATTGTCCGCGGGTCGTCATTCT
GACAGCACTCCAGACGGCAGTGAAATTGTGTTATCCTCCTTGTTTTGTTT
TTATTTCCGGACGACAACAACAGTGCTTCGTATATGGTGCAGGCAGCACT
CCAGACAACAACTGCTATAGCTAGCTGCCACGAGTTCGTTAGTAGTGGGA
AAGGGGGGAGAACACGGTGGGTGTCGTTTTCGAATGGATACCTGCAGTAG
TGTTAGTAGGTCAGTATACACATCGCCCAGTATGAGTTGGTGTACCTATT
CGGTCCTGTGTACCCCTTCTTTTTGATTTTTTTCTGTGTTTTCCAGATAT
TCCTACATAGGGCTCAGCACTTGTGTGACCACGGGCTAGATCTTGGACGA
TGACCTAATGTGTGAACGAATGTGTGAATCATAACAACAAAACAACAATC
AATCAACCAATCAATCAACCAATCAATCATAATCAAGCAATAACGATCAA
GTAATCACAGTCAATCAATCGACCAAGCAATCACAGTCAATCAAGCAAGC
AAGCAATCACAGTCAATCGATCAATCAATCAATCACGCCACCAATCAAAT
CAACAGGTAATTCGGCCACGACCTGAAGGAGCGGCGGAGGCGGAGATGGG
ACTGATAGAGTCGATTAGGTTACGACAATCCTCGAGGGTGAGTGTGGATA
CTTTTTTTATCATGTAAAAAAAACTGATTTTTTTGGTACTACTGGCAGGG
GTGACGCTGAGGTCTAAGCGATTAGATTGTCGCCCCTGTTGGCGGAAGTT
CGGTTCGATTCCCGGTGTAAACAAAATGACACTTTCTGTGCCATCTTCCG
CCACGGAAAGAGCGAGAGCGCGAGTAAGCACAGTTCGATGAAAGTCGACG
AGCTACAAGTAAGAGAATGCTGACCCATTTGACGCGAGAAAATCCTACTG
TTAAATTTTAGGCATGATAAAGGTACTGTTAGGCATGATAAAGGTACTGT
TAGGCATGATAAAGGTACTGTTAGGCATGATAAAGGTACTGTTAGGCGTG
ACAAAGGTACTGTTAGGCATGATAAAGGTACTGTTAGGCGTGACAAAGGT
ACTGTTAGGCATGATAAAGGTACTGTTAGGCATGATAAAGGTACTGTTAG
GCGTGATAAAGGTACTGTTAGGCGTGACAAAGGTACTGTTAGGCATGATA
AAGGTACTGTTAGGCATGATAAAGGTACTGTTAGGCGTGATAAAGGTACT
GTTAGGCATGATAAAGGTACTGTTAAGCATGTACCGGGGGGAGAAGGGAA
GACACCTGTGACCACGGGTTGCTCAGACAGGTACTGTTAGGCATGATAAA
GGTACTGTTAGGCATGATAAAGGTACTGTTAGGCGTGATAAAGGTACTGT
TAGGCATGATAAAGGTACTGTTAAGCATGTACCGGGGGGGGGGAGAAGGG
AAGACACCTGTGACCACGGGTTGCTCAGACAGGTACTGTTAGGCATGATA
AATGTACTGTTAGGCATGATAAAGGTACAATGGTTGGCATGTACCGGGGG
GAAGGGTAGACACCTGTGACCACGGCTTGCTCAGACAGGCACTGTTAGGC
ATGATAAAGGTACTGTTAGGCGTGATAAAGGTACTGTTAGGCGTGCTGAG
CGATGGGTAGAATAACTCCTGTGAGCTGCGGACTGGGAGGTAACAGTGAT
GGATAAACGTAAATAAATAAATAGAATCCCAATAAAACACGGAGGTAACG
GTGAATACACGGTTTACCACCCCAACATGGGTTTACCATTACCGTCCGAA
TCATTTCCATATTCGTACTGATTGTTCCTCCTAGAATATACAAATGTCCG
TGGTCGGTCGGTCGGTCGGTCGGTCGGTCGGTCGGTCGGTCGGTCGATCG
GTTGCAAGCTGTTGTATATGACAGTCCGTTTCATTCAACGTTTTTTTTTG
TTCGTTACTGGTCGTTTTTGTTTTCGGTCAGGCGGTCGGGCGGTCCATCG
GTCTGTCGGTCACAAGCTGTTGTATGATATATATGTGACAGTCCGTTGCA
TTCAACGTTCCTTTTTTTTCGTTTCTGCTCGTTTTCTGTTGTTTTTTTAC
GCGTTTTTTTTTCACAAAAAAAGGCGGCGTGTCCCGAGTGCCGATCCGAT
CTGTTGAGATCAACGCACACCTTCAACAGCGACGGCACCCCCCTCGGCCT
CTCCAACTCCTCCTCACACCACAGCGCCTCGATCATGCTTGGATTGAACC
CAGCAGATACCGCCACCACCGCTACCGCGACCAAGAACAAGAGCAAGAAA
CTGCATCCCTGTTCGGCGCATCGGCATCGCTCGTCCCCAGGGGAAGGAGG
GCTGCCGGGATTGGTC
back to top

Coding sequence (CDS) from alignment at D-herbacea_F_contig1:2670990..2679005+

>mRNA_D-herbacea_F_contig1.102.1 ID=mRNA_D-herbacea_F_contig1.102.1|Name=mRNA_D-herbacea_F_contig1.102.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1530bp|location=Sequence derived from alignment at D-herbacea_F_contig1:2670990..2679005+ (Desmarestia herbacea DmunF female)
TCTCGAAGAACGCCGTTGCATCATGCTGGTCGATGGGGGTCGCCGGGCAC
GAGCGTTTTGCTTCTGGATGCTGGCGCTGATATCGAGTCTCGAAGAACGC
CGTTGCATCATGCTGGTCGATGGGGGTCGCCGGGCACGAGCGTTTTGCTT
CTGGATGCTGGCGCTGATATCGAGGCACGAGACGAAGAACTTGCACGCAC
GCCTCTGCACTTCTCTAGCAGATCCGGAGGGTTGGGGACCACCCTGGTGC
TTCTCCAGAACGGCGCAGATTTGGACGCGAAGACCGGCACGAGACGAAGA
ACTTGCACGCACGCCTCTGCACTTCTCTAGCAGATCCGGAGGGTTGGGGA
CCACCCTGGTGCTTCTCCAGAACGGCGCAGATTTGGACGCGAAGACCGTT
GCGGGAAATACTCCTTTGCATCTGGCCTGCGATCGAGGCCTCGTGGAGAA
CGTTAAGCTCCTCTTGGAGTGGGGTGCGAACAGAAAGGTCTTGAACGAAG
CGGGCAACGTGCCGGCCGAGTTGCGGGAAATACTCCTTTGCATCTGGCCT
GCGATCGAGGCCTCGTGGAGAACGTTAAGCTCCTCTTGGAGTGGGGTGCG
AACAGAAAGGTCTTGAACGAAGCGGGCAACGTGCCGGCCGAGGTGGCAGC
GCCTTGGGTGGAGGATTCTGTGAAGGCCAGATTGAGAGAGCTCTTGTCTG
ATGAGGGGCAAGATGGTGAAGGGAACGAGGGTGTGGCAACTCGACCGAGA
CCGACGCCGACGGTGGCAGCGCCTTGGGTGGAGGATTCTGTGAAGGCCAG
ATTGAGAGAGCTCTTGTCTGATGAGGGGCAAGATGGTGAAGGGAACGAGG
GTGTGGCAACTCGACCGAGACCGACGCCGACGGTAATTCGGCCACGACCT
GAAGGAGCGGCGGAGGCGGAGATGGGACTGATAGAGTCGATTAGGTTACG
ACAATCCTCGAGGGTAATTCGGCCACGACCTGAAGGAGCGGCGGAGGCGG
AGATGGGACTGATAGAGTCGATTAGGTTACGACAATCCTCGAGGGCGGCG
TGTCCCGAGTGCCGATCCGATCTGTTGAGATCAACGCACACCTTCAACAG
CGACGGCACCCCCCTCGGCCTCTCCAACTCCTCCTCACACCACAGCGCCT
CGATCATGCTTGGATTGAACCCAGCAGATACCGCCACCACCGCTACCGCG
ACCAAGAACAAGAGCAAGAAACTGCATCCCTGTTCGGCGCATCGGCATCG
CTCGTCCCCAGGGGAAGGAGGGCTGCCGGGATTGGTCGCGGCGTGTCCCG
AGTGCCGATCCGATCTGTTGAGATCAACGCACACCTTCAACAGCGACGGC
ACCCCCCTCGGCCTCTCCAACTCCTCCTCACACCACAGCGCCTCGATCAT
GCTTGGATTGAACCCAGCAGATACCGCCACCACCGCTACCGCGACCAAGA
ACAAGAGCAAGAAACTGCATCCCTGTTCGGCGCATCGGCATCGCTCGTCC
CCAGGGGAAGGAGGGCTGCCGGGATTGGTC
back to top