prot_D-herbacea_F_contig111.953.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig111.953.1
Unique Nameprot_D-herbacea_F_contig111.953.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length102
Homology
BLAST of mRNA_D-herbacea_F_contig111.953.1 vs. uniprot
Match: D7FIJ3_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ3_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.220e-42
Identity = 72/99 (72.73%), Postives = 82/99 (82.83%), Query Frame = 0
Query:    1 MKTSFCAAAGIIAAVGVLTPAVRAD-VITKQQQITMFNPEDFTYDLGGPAPAKLVDGIQFRGVNVNQLPALEGQGISMALVNLDPCAINLPHVHPRATE 98
            MKT FCAAAG + A G+++  V+A  V+T QQQIT+FNPEDF + LGGP P  LVDG Q R VNVNQLPAL+GQGISMALVNLDPCAINLPH+HPRATE
Sbjct:    1 MKT-FCAAAGFVIAAGLMSSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98          
BLAST of mRNA_D-herbacea_F_contig111.953.1 vs. uniprot
Match: D7FI68_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI68_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 1.470e-42
Identity = 73/100 (73.00%), Postives = 82/100 (82.00%), Query Frame = 0
Query:    1 MKTSFCAAAGIIAAVGVLTPAVRAD-VITKQQQITMFNPEDFTYDLGGPAPAKLVDGIQFRGVNVNQLPALEGQGISMALVNLDPCAINLPHVHPRATEV 99
            MKT FCAAAG + A G++   V+A  V+T QQQIT+FNPEDF + LGGP P  LVDG Q R VNVNQLPAL+GQGISMALVNLDPCAINLPH+HPRATEV
Sbjct:    1 MKT-FCAAAGFVIAAGLMPSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEV 99          
BLAST of mRNA_D-herbacea_F_contig111.953.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 4.050e-40
Identity = 67/99 (67.68%), Postives = 78/99 (78.79%), Query Frame = 0
Query:    1 MKTSFCAAAGIIAAVGVLTPAVRADVITKQQQITMFNPEDFTYDLGGPAPAKLVDGIQFRGVNVNQLPALEGQGISMALVNLDPCAINLPHVHPRATEV 99
            MKTSFCAAAG + A G+++      V+T QQQIT++NPEDF + LGGP P  LVDG Q R   VNQLPAL+GQGISM LVNLDPCAINLPH+HPRATE+
Sbjct:    1 MKTSFCAAAGFVIAAGLMSAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEM 99          
BLAST of mRNA_D-herbacea_F_contig111.953.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 3.500e-37
Identity = 63/101 (62.38%), Postives = 78/101 (77.23%), Query Frame = 0
Query:    1 MKTSFCAAAGIIAAVGVLTPAVRAD-VITKQQQITMFNPEDFTYDLGGPAPAKLVDGIQFRGVNVNQLPALEGQGISMALVNLDPCAINLPHVHPRATEVR 100
            MKTSFC+AAG++ A G ++   +A  V+T QQQITMFNPEDF + LGGP P   VDG Q R   + Q+PAL+GQGI+MALVNLD C INLPH+HPRATE++
Sbjct:    1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQ 101          
BLAST of mRNA_D-herbacea_F_contig111.953.1 vs. uniprot
Match: A0A7S3EC99_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EC99_9RHOD)

HSP 1 Score: 66.2 bits (160), Expect = 1.080e-11
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 0
Query:   10 GIIAAVGVLTPAVRAD--VITKQQQITMF-NPEDFTYDLGGPAPAKLVDGIQFRGVNVNQLPALEGQGISMALVNLDPCAINLPHVHPRATEV 99
            G++ AV  L  +   D  +  +  +  +F N  DF +DL G   +    G + +G + ++ PAL G G+S  L  +DPC +NLPHVHPRATE+
Sbjct:    9 GLVLAVSALAVSAMYDPSIEVRDLRAELFPNASDFKFDLAGAPASDNGVGAKIQGGSQSRFPALNGLGVSYTLFTIDPCGMNLPHVHPRATEL 101          
BLAST of mRNA_D-herbacea_F_contig111.953.1 vs. uniprot
Match: A0A7S2ZJB7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZJB7_9RHOD)

HSP 1 Score: 66.2 bits (160), Expect = 4.700e-11
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 0
Query:   10 GIIAAVGVLTPAVRAD--VITKQQQITMF-NPEDFTYDLGGPAPAKLVDGIQFRGVNVNQLPALEGQGISMALVNLDPCAINLPHVHPRATEV 99
            G++ AV  L  +   D  +  +  +  +F N  DF +DL G   +    G + +G + ++ PAL G G+S  L  +DPC +NLPHVHPRATE+
Sbjct:    9 GLVLAVSALAVSAMYDPSIEVRDLRAELFPNASDFKFDLAGAPASDNGVGAKIQGGSQSRFPALNGLGVSYTLFTIDPCGMNLPHVHPRATEL 101          
BLAST of mRNA_D-herbacea_F_contig111.953.1 vs. uniprot
Match: A0A7S0G545_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G545_9RHOD)

HSP 1 Score: 62.0 bits (149), Expect = 3.500e-10
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0
Query:   39 EDFTYDLGGPAPAKLVDGIQFRGVNVNQLPALEGQGISMALVNLDPCAINLPHVHPRATEV 99
            +DF ++L G   +    G + +G +  + PAL G G+S  L  +DPC +NLPHVHPRATE+
Sbjct:   24 KDFKFNLAGAPASNNGVGAKIQGGSQARFPALNGLGVSYTLFTIDPCGMNLPHVHPRATEI 84          
BLAST of mRNA_D-herbacea_F_contig111.953.1 vs. uniprot
Match: A0A0G4IUK5_PLABS (Cupin type-1 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IUK5_PLABS)

HSP 1 Score: 63.9 bits (154), Expect = 4.060e-10
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 0
Query:   37 NPEDFTYDLGGPAPAKLVDGIQFRGVNVNQLPALEGQGISMALVNLDPCAINLPHVHPRATE 98
            NP+ F YD   P       G   R   + +LP L G GI+++LV+L  CAIN PH+HPRATE
Sbjct:   44 NPDQFFYDFSKPVKITQGPGGSLRTCGIEELPTLAGMGIAVSLVDLKACAINNPHIHPRATE 105          
BLAST of mRNA_D-herbacea_F_contig111.953.1 vs. uniprot
Match: A0A7S0G8V0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G8V0_9RHOD)

HSP 1 Score: 59.3 bits (142), Expect = 5.590e-9
Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 0
Query:   37 NPEDFTYDLGGPAPAKLVDGIQFRGVNVNQLPALEGQGISMALVNLDPCAINLPHVHPRATEV 99
            N EDF ++L   A A    G   +  + ++ PAL G G+   L  L+PC +NLPHVHPRATE+
Sbjct:   39 NAEDFKFNLFEAAAANNGAGAMIQAGSQSRFPALNGLGLCYFLFTLEPCGMNLPHVHPRATEI 101          
BLAST of mRNA_D-herbacea_F_contig111.953.1 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.360e-8
Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   40 DFTYDLGGPAPAKLVDGIQFRGVNVNQLPALEGQGISMALVNLDPCAINLPHVHPRATEV 99
            DF +DL G        G   + ++  QLP+L G+ ++M  + L+PC INLPHVHPRATE+
Sbjct:    9 DFKFDLAGSTATAGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEI 68          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig111.953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIJ3_ECTSI1.220e-4272.73Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
D7FI68_ECTSI1.470e-4273.00Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JV79_9PHAE4.050e-4067.68Cupin type-1 domain-containing protein n=6 Tax=Ect... [more]
D8LDW6_ECTSI3.500e-3762.38Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A7S3EC99_9RHOD1.080e-1137.63Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZJB7_9RHOD4.700e-1137.63Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0G545_9RHOD3.500e-1044.26Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A0G4IUK5_PLABS4.060e-1046.77Cupin type-1 domain-containing protein n=1 Tax=Pla... [more]
A0A7S0G8V0_9RHOD5.590e-944.44Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A835YZF9_9STRA1.360e-845.00RmlC-like cupin domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 55..99
e-value: 1.1E-8
score: 34.9
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 20..101
e-value: 2.8E-15
score: 58.3
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 33..99
NoneNo IPR availablePANTHERPTHR31238:SF14GERMIN-LIKE PROTEIN SUBFAMILY T MEMBER 1-RELATEDcoord: 33..99
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..101
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 37..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig111contigD-herbacea_F_contig111:591036..591798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig111.953.1mRNA_D-herbacea_F_contig111.953.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig111 591036..591798 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig111.953.1 ID=prot_D-herbacea_F_contig111.953.1|Name=mRNA_D-herbacea_F_contig111.953.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=102bp
MKTSFCAAAGIIAAVGVLTPAVRADVITKQQQITMFNPEDFTYDLGGPAP
AKLVDGIQFRGVNVNQLPALEGQGISMALVNLDPCAINLPHVHPRATEVR
C*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011051RmlC_Cupin_sf
IPR014710RmlC-like_jellyroll
IPR006045Cupin_1