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Homology
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: D8LTW6_ECTSI (40S ribosomal protein S25 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTW6_ECTSI) HSP 1 Score: 206 bits (525), Expect = 2.620e-67 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1
Query: 4 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE 330
PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE
Sbjct: 2 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE 110
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A835ZCY0_9STRA (40S ribosomal protein S25 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY0_9STRA) HSP 1 Score: 157 bits (397), Expect = 8.620e-48 Identity = 81/108 (75.00%), Postives = 91/108 (84.26%), Query Frame = 1
Query: 4 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVE 327
PPK QQKSKEQK AAAMAGGK RKKKWSK K R+K+ N+VLF E TY R + EVPKMKL+T S LVERLK+NGSLARAAIRELEEKG+IR+V H AQ++YTRATN E
Sbjct: 2 PPKVQQKSKEQKAAAAMAGGKSRKKKWSKNKARDKILNEVLFKEPTYERMMNEVPKMKLVTTSALVERLKINGSLARAAIRELEEKGVIRRVSHHSAQLVYTRATNTE 109
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: F0YAB4_AURAN (40S ribosomal protein S25 n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YAB4_AURAN) HSP 1 Score: 156 bits (394), Expect = 2.390e-47 Identity = 81/103 (78.64%), Postives = 92/103 (89.32%), Query Frame = 1
Query: 4 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTR 312
PPK QQKSKE KMAAAMAGGK +KKKWSKGKVREK+AN+VLF+EDTY R LAE+PKMKLIT S LVERLKVNG+LARAAI+EL+EKGLI++V HH Q I+TR
Sbjct: 2 PPKVQQKSKEAKMAAAMAGGKSKKKKWSKGKVREKMANKVLFDEDTYARLLAEIPKMKLITPSALVERLKVNGALARAAIKELQEKGLIKQVSYHHTQWIFTR 104
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: W7TVF9_9STRA (40S ribosomal protein S25 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVF9_9STRA) HSP 1 Score: 155 bits (391), Expect = 7.300e-47 Identity = 81/110 (73.64%), Postives = 95/110 (86.36%), Query Frame = 1
Query: 4 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYT-RCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE 330
PPK QQK+KEQK+AAAMAGGK +KKKWSKGK+REKVAN+VLF+E+ YT R L E+PK KLIT S LVERLK+NGSLARAA+REL+EKGLI+ V HH+Q+IYTRAT E
Sbjct: 2 PPKVQQKTKEQKLAAAMAGGKSKKKKWSKGKMREKVANKVLFDEEMYTNRLLTEIPKSKLITPSALVERLKINGSLARAALRELKEKGLIKPVSVHHSQIIYTRATAAAE 111
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A7S3Y488_HETAK (40S ribosomal protein S25 n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3Y488_HETAK) HSP 1 Score: 153 bits (387), Expect = 4.310e-46 Identity = 81/109 (74.31%), Postives = 93/109 (85.32%), Query Frame = 1
Query: 4 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE 330
PPKTQQKSKEQKMAAA+AGGK RKKKWSKGKVREK+AN+VL++EDTY R L E+PKMKLIT S LVERLKVNG+LARA++ EL EKGLI++V H +Q IYTR T E
Sbjct: 14 PPKTQQKSKEQKMAAALAGGKSRKKKWSKGKVREKMANKVLYDEDTYERLLTEIPKMKLITPSALVERLKVNGALARASLLELHEKGLIKEVARHGSQQIYTRTTGDAE 122
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A7S2G994_9STRA (40S ribosomal protein S25 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G994_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.360e-44 Identity = 79/108 (73.15%), Postives = 91/108 (84.26%), Query Frame = 1
Query: 4 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVE 327
PPKTQQKSKE KMAAAMAGGKG+KKKWSKGKVREKVAN+VLF E+ Y R EVPKMKLIT S LVERLK+ GSLARAAI+ELE + +I+++ H +Q +YTRAT VE
Sbjct: 2 PPKTQQKSKEAKMAAAMAGGKGKKKKWSKGKVREKVANKVLFEEELYERLKTEVPKMKLITPSALVERLKIGGSLARAAIKELESEEMIKRLSYHSSQWVYTRATAVE 109
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: F0WED2_9STRA (40S ribosomal protein S25 n=2 Tax=Albugo TaxID=65356 RepID=F0WED2_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.160e-44 Identity = 81/111 (72.97%), Postives = 97/111 (87.39%), Query Frame = 1
Query: 4 PPKTQQKSKEQKMAAAMAGGKGR-KKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRA-TNVEE 330
PPKTQQK+KEQKMAAAMAGG+G+ KKKWSK KVREKVAN+VL++++TY R L+EVPKMKLITAS +VERLKVN +LAR++IR+LE G I +V AHH Q+IYTRA TN EE
Sbjct: 2 PPKTQQKTKEQKMAAAMAGGRGKGKKKWSKCKVREKVANKVLYDQETYDRLLSEVPKMKLITASAIVERLKVNATLARSSIRQLESDGTIARVLAHHTQLIYTRAATNAEE 112
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A485LJ93_9STRA (40S ribosomal protein S25 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A485LJ93_9STRA) HSP 1 Score: 140 bits (354), Expect = 3.060e-41 Identity = 76/105 (72.38%), Postives = 90/105 (85.71%), Query Frame = 1
Query: 4 PPKTQQKSKEQKMAAAMAGGKGR-KKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRA 315
PPKTQQK+KEQKMAAA+AGG+G+ KKKWSKGKVREK AN+VLF+++TY R EVPKMKLITAS +VERLKVN +LARAAI ELE+KG I+ V H Q+IYTR+
Sbjct: 2 PPKTQQKTKEQKMAAALAGGRGKGKKKWSKGKVREKTANKVLFDQETYERMCKEVPKMKLITASAVVERLKVNATLARAAILELEQKGEIKCVTKHRCQMIYTRS 106
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A067CYE5_SAPPC (40S ribosomal protein S25 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CYE5_SAPPC) HSP 1 Score: 136 bits (342), Expect = 2.060e-39 Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 1
Query: 4 PPKTQQKSKEQKMAAAMAGGKGR-KKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVE 327
PPKTQQK+KEQKMAAA+AG +G+ KKKWSKGK REK N+VL++++ Y R EVPKMKLITAS +VERLKVN +LARA IRELE KG I+ V H AQ+IYTRA + E
Sbjct: 2 PPKTQQKTKEQKMAAALAGSRGKGKKKWSKGKAREKTQNKVLYDQEAYERMCKEVPKMKLITASAIVERLKVNAALARATIRELELKGDIKVVSKHSAQLIYTRAISAE 110
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A7S3HEM3_9STRA (40S ribosomal protein S25 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S3HEM3_9STRA) HSP 1 Score: 135 bits (340), Expect = 5.280e-39 Identity = 72/106 (67.92%), Postives = 86/106 (81.13%), Query Frame = 1
Query: 7 PKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNV 324
PK QQK+KEQK+AAA+AGGK +KKKWSKGK+REK+ +VLF+ED + R EVPKMKLIT S LVERLK+NGSLARAA + L E+G I K++ HHAQ IYTR T V
Sbjct: 13 PKVQQKTKEQKLAAALAGGKSKKKKWSKGKLREKMNAKVLFDEDGWKRLQEEVPKMKLITPSALVERLKINGSLARAACKYLLEEGKISKIETHHAQSIYTRVTAV 118
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 207.2 |
| Seed ortholog evalue | 3.9e-51 |
| Seed eggNOG ortholog | 2880.D8LTW6 |
| Preferred name | RPS25 |
| KEGG rclass | RC00109,RC00110,RC00158,RC00219,RC00332 |
| KEGG ko | ko:K02975,ko:K10886,ko:K13998,ko:K20365 |
| KEGG Reaction | R00936,R00937,R00939,R00940,R02101,R02235,R02236 |
| KEGG Pathway | ko00240,ko00670,ko00790,ko01100,ko03010,ko03450,map00240,map00670,map00790,map01100,map03010,map03450 |
| KEGG Module | M00053,M00126,M00177,M00179,M00841 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000028,GO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005911,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007154,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009506,GO:0009605,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030054,GO:0031090,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034198,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0042254,GO:0042255,GO:0042274,GO:0042594,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070727,GO:0070925,GO:0070972,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:0098588,GO:0098805,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904,GO:1990928 |
| EggNOG free text desc. | structural constituent of ribosome |
| EggNOG OGs | COG4901@1,KOG1767@2759 |
| EC | 1.5.1.3,2.1.1.45 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03400,ko04131 |
| Exons | 3 |
| Model size | 333 |
| Cds size | 333 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927519.0133302-CDS-D-herbacea_F_contig110:901146..901224 | 1622927519.0133302-CDS-D-herbacea_F_contig110:901146..901224 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 901147..901224 + |
| 1690790213.1380985-CDS-D-herbacea_F_contig110:901146..901224 | 1690790213.1380985-CDS-D-herbacea_F_contig110:901146..901224 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 901147..901224 + |
| 1622927519.026684-CDS-D-herbacea_F_contig110:903715..903808 | 1622927519.026684-CDS-D-herbacea_F_contig110:903715..903808 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 903716..903808 + |
| 1690790213.151556-CDS-D-herbacea_F_contig110:903715..903808 | 1690790213.151556-CDS-D-herbacea_F_contig110:903715..903808 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 903716..903808 + |
| 1622927519.04224-CDS-D-herbacea_F_contig110:907059..907221 | 1622927519.04224-CDS-D-herbacea_F_contig110:907059..907221 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 907060..907221 + |
| 1690790213.1685019-CDS-D-herbacea_F_contig110:907059..907221 | 1690790213.1685019-CDS-D-herbacea_F_contig110:907059..907221 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 907060..907221 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig110.926.1 >prot_D-herbacea_F_contig110.926.1 ID=prot_D-herbacea_F_contig110.926.1|Name=mRNA_D-herbacea_F_contig110.926.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=111bp
QPPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTR
CLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQV
IYTRATNVEE* back to topmRNA from alignment at D-herbacea_F_contig110:901147..907221+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig110.926.1 ID=mRNA_D-herbacea_F_contig110.926.1|Name=mRNA_D-herbacea_F_contig110.926.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=6075bp|location=Sequence derived from alignment at D-herbacea_F_contig110:901147..907221+ (Desmarestia herbacea DmunF female)
CAGCCGCCGAAGACGCAGCAAAAGTCGAAGGAGCAGAAGATGGCCGCGGC
CATGGCCGGTGGCAAGGGCCGCAAAAAGGTCAGCCGACATGTTATTAGTC
ACCTAAAGACAGCAAGCACAACGCTGCAGAGGTGCTCGTACGAGAGTTGA
TGCTGTCCACTACTACTACTACTGTACTATCATACATACGAGTATTTATC
CTGTAAGGCTCTACTCTACGCGTACTATCAGTACGACGACTACTGTCTGT
TGTGAATGGAGACTATCATGAGTAGGCATTGTTTTGGTCTTCGTAAGCCG
AGTCTAGTGCGTCTCAACGTAACTACTCGTACTCGTACTCAGCTCGCCGG
GTGATGTGCTCAACGACGATGACATGCCTTTGTTTTCGCAAAGGAAGGCC
CCATAAAAATCGACAGGAAATCGATGTGATGGGTTTTGTTGTTAAAATGT
AGATATTCGTGCCTCTTGCACGGAGTTGCTACAAGAGATTCACCAGAGCA
GTATGAGACCAAGATTGCACCCAACAAGGGGGATGCGTGGAGAATATATC
GGGGTTTGTTCGTGCTGCCTTCCTTGCTTGTTACATCGTGCGATGTCCCA
TGTTTTTCACGCATGTGAAGGTGAAGGTTTCACCTACAGTAGAGGGCCCC
TAGTAATACTAGTACTAAAAGTTGCACACAACAGGCGACGTGCCTGGAGC
TACTCGTACCAATCACAGTAGTACAGTAGTACCCATGATGGACAACATAT
GGCGCCTTTGCAATCTATTAATAAGTCACGGTACCAACCCTAAACGATGA
TATGTGTCCAAAGCAGGATGTATTGTAGTTACTCGTATCGTTTCCAGTGC
CATGCAAGGGTATACACACCTGTGTGGCACTCATTATTAGGCGTTTTTAT
TGCCCGCCCCTACTATAGTAACACAAGATTAGGGCCTCTAAAGGAACAAC
AAACTCCCGGCTCGACTCAAAGTGTGTGGTGCTACAGTAGTAAGATAGAT
GCAAAGCCGCTATGTTGTATCATAGATTGTATTGTGATCAACGCATGCAT
CTGCGCTTATGGTCCGTGTGCCGCTCGGATTTGTTGAGAATAACCTAAGA
AAGAAACTACTACTGTAACACTTGTACTGTTTACAGTCGCGGTAACCACC
CCCTCGCAGTGGTACAAATGGTGACACCACCGTACCGTAGTTGCGTGCGT
CCCGGAACCCCAGAATTGTGGTGTGGGCCGTACGTTCAGTCACGTCACCC
GCGCGAGTCGTATTGGCGTTCGTGTTGGTGTCGAGTATTCGATTGGTTGT
GTGGGGCTGCGGCGTTATATATGCACGCGTGCATTGGCAAGACAAAATTC
GCTCGTGGTACGAACTACTGGAGTATAGTAGGCACGGCTGCTGAATGTGC
AGCGATCGGCGAAGCAGGCTGCCCGTCTGCCAAAAGATGGTGCTGTACGC
AAAAAGCGCAGGGGTGGTTATTACTGTATCCAAATGGCAAGACAACTGGT
GGTAGCATCTGTGGTGAAAACAGTTGTGTTGTGTGATTGAAGTAATTAGA
GCATGCATTCCGTATAGCGCCGTCCCAGAATGTAGATCGTTATACATGCG
TTAAAAAAGGCAAAAAAAAAAAAAGAAAGCGAAAATCACCTGGGGGGGAA
ACTATGAGCCCGCAACTACTGTACACTATTAAAACAAGTAATTTTCACTT
TCGTAAGCAGACGGTAGCGAATGAGAGTCGATATCAAACAGTATGATTTG
ATGCACTGCAGTGTGGTATAGATGTTGTGTAGTAGTAGTATGATGGTAGG
TACAAATTCTATTACTATTACAGAGGCCCATAACAACCATTGTAGGCCCA
AAAAAAAACAAGGTGAAAAAGGAGGGGGGTCAAGGATCCTTCGCGACCCC
CCCCCCCCCGAAAAACGCAACCATAGCATCGTTAAAATAACGTCTACTGC
CACCGCAATAACATAAAAACGAACGAGATCCGCGATTCACGCCATGACTG
TCTCGAGATATATCAGTGTTTTGGGCCTATTTATGAGGGGCGCCCGTGAT
AGAACAAAACGCCAAAATTTAATTAATTCATACTAATTGAAGACATGAAA
TAATTTTCACTGTTGTAAGTAGACGGTAAAAAATATTATAAGCATTTTAC
TTTCGTAGGAGACGATGTCACAATGAAAAAAAAAAAACATTTTTCCGTTC
AATTCCCCCCCCCCCCGCCCCCCGTTATTCCAAGTGGTCTATATTGATAA
GATGCCAGGTATGTAAACGCTTAAACATAACCGTGGCAGGCGTTGTCAGG
CGCTGCACCTTCCCTGGCCCTTTCGTTTCTCGCCCGCCTGTTGCTTGTAG
CACGATGCCTTGGTTTGATTCGTTGTCAGGCGCTGCACCTTTCCCGGCCC
TATCGTTTCCCGCCCGCCTGTTGCTTATAGCCCGATGCCTTGGTTTGATC
CATTCGTTCGTTGGCCGTCCTCCGAGATACACAACACGCACGCTCACACA
TTTGCGTACTGCGTGCGTTCGTTCGTTTCCTTCGTTGTCTTCGGGGTTTT
TGGTCTCGTGTGAGAGCAGAAGTGGTCGAAGGGTAAGGTCAGGGAGAAGG
TGGCCAACCAGGTCCTCTTCAACGAGGACACGTACACCCGTTGCCTGGCC
GAGGTACCTAAGGTGAGCACCTTGAATCTTGGGGCAACCAAAGCAGGCAC
GCAGCCCAACCCACGTTGTGCGCCAGCTGCCGTATAGTCCCGTCTGCGGC
GGCCTTTTTTTTTTATTTTTTATTTTTGTATCTATTGTTATTGTCGCCTG
CTTGCTGCGAATTAGAGGAGTTGTAGTGCTTTTCATGCTTCCGTTGGTTA
TTGGTCGGTCGGTGCGTACGTTCTTGTGTTCGTTTTGTTGTATCTTGATG
AGCAACAACGTGTGTTGTTTCAGCAGTCCGGAAAATTGTGTCACGAACGT
ATAACCCGAACCCTAACGAACGCACTGTAGTAGCACAGAGTCAAACACGT
TTTCGTAGCCTACCTGTGTGGAGGATGACGATCAACAGCTGTAGTCGTTG
TCGAGGTCATTTTTTTTTTTTTTTTATGTACGAGGTATGCCCACTGTCGG
TGGCGGTCAACGATTGTTAGCTCGACTATACCTCTTGCGTATATATTTTT
GTAGCTGTCGGCGAGAGCTGTTTCCTGTCCCTCGTATTGGTGTTGACGTT
ATTGATTTGATCGGTTATGTCGTTTGTGCTCTTGTGGAGTCTATCAATCG
ACCCATCCAATTACGTGTCGGACAACCCAGCACCAACGCTTTTTGATTGG
TGAATTCCTTCGAGACGCGTCGGCGACTGTCTCCCTGCGCAGCTGCAAGG
AAAGTATGTATCCATGGTATGAATCACAAATACAAGATATCTTTGTGTTT
CATCTGTGGTCCGTTAACCCTTACAATACCGGACGGCTATCAAAAATAAA
AAATCACAAATCGCAATATTTTTAAATGCAAGCTTCTGATTGGCTCAGCG
AGCTAAAGCGAACTAAACTCTGTGCAGGCAGGTGTTTCATTTTTAGGCAG
GTGATGACGTGTGATGTAGATAACCACCTCACTTTAGTGTGCCAACTCTA
AACCAAGGTCGTTTTGCCTTTCATCAGGGCATGTTGCAAATCACATTTCT
TTTTATACTTTTTGATTGATACGAATTCTAAAACAAAGTCATTAGACTCA
CGAAAAAAAAGTGGGCTGTAACATTTGCCTTTTGTGTTTGCTGAGTTCCC
TAGGGGTCAGCGAAAAAGGCCAAGGGGTCTCGCAGTTTGCAACCACGGAC
GCTACCTGTCCAAACTGCAATTCTGAAAAATCGAATGGGGGAGAGGGGGT
ACAGGGGATGTTAGCCTACCAACCCCGGGGTTTCTGTCCAAAAAGCGGCG
ATTTTTGGCCAAATATGTCGGTTGACGTCAGTTTTACCCCTTGACGGACG
GTCAGCAGTCAAGGAAGCCCTATACTAAAACTAGTATATTAATGTCAAGA
GAGGCCTTGACGGCGTGATAAACCGACATCTTTGAGTCCACTGGAAGACT
GTGAGCCGTCTGAAAAGAGGTGGAGGTAGCCTTGCACGATGTCTACTACT
GAACAACCAACCGACTAGAAAAGCCCAACGCAGCGTTCACTCGGAGAGTC
CAAAGATATCATCGTATGTCATGTTATAGAATGGAGAAGCATGGAGGTTG
TCTCGAAAACAAGCATGCAGCCACGAAGAAGATGAGGCTGTGCCGACCAG
AAAACCTTTTGTATAATAATATCTAAACGACGACTATCACGATCGTCATA
CGATATATCCGCGCGACCGATGTATCACACAGTGAGGTTGACGATTATCC
CCTGGCCCCCGAACCAGTTTGGAACGTCACGGCTGATGTCTTTGCAAGTA
AAAATACTACTACTACTACTACTGCTCTGCTGATTGATTGGCTACGTCCG
TCCGCCGTCTAGGACGTGTTTTTTTTGTGTTTTGATTATTATTATTATGC
TATTATTCTTGTGCGAAACCGATATAAACACTGCAATGTTGGTATCATGT
TGGTGGACTTTGTCTGTCCGTCTGTACCACTACTATAATCGTAGTATTCG
TACTTGGATGACACATATCATTGTACCGGTCATGGTGTAAACCTCCAAAC
CTGTACTCTTGCTTACAGCAAGGTTAGAGGTTGTTGCCAAGGTAAAACAC
TTTGGTAGTTTACCAAAGTGTGCTCAGAcCCCTCTAGGGGGGGGGGGGTA
GGTAGCGTCCGTAATTGCAATCCGCGAGACCCCTTGAAAAAGGCTGTATA
GGGTGTTCCAATGATACTCATGCGGCAGTCGGATCCGGGGAACACAAAGA
GAGCACCAAAACAGACTGATGATAAATAATTAGCAGTCGAGGTGAAAGAG
AAGTCTTCGCTCCCCTCAGACATCGCCTAGTCGAAGTACCACGAAGAGGG
TACGAACTCGGGCGCTGCTAGGTGATCGCATGTGTTGTCCCTGGAAAATA
CCTTAGGTGAATTTCGTCTCCCTAGTCTTTTTTCTAATATACGTGCGCGT
CTTGAGGGTATGGTAGCTTCGATTATTCTTCGTTTTGCAGTAGGCTTAGC
AATGTTAAGACGGAAATTTACAGGAACTTTTACATAGGTTTTTACTTGCT
ATTAGCGTAGGTGTGTTCGTTAGGGTTCGGGTTAGGGTTAGTGGTAGAAA
TTTCCGAAACTGCTGTGCAGCCCCACGTTGGTACTAATCATATAATAAAA
CGAAAAAGAAAGTTCTGTCCTACAACGTTGTAAAGGAGGCTCTCGTTTTG
TGTTTGGGGTAAACGGCAGCATTTTTTCTCGAGGTGTGCCCTCTACGCTG
AGCCGCATGTACGACGCAACTTGGTTCGTTCCGACGTTGTACTGTGGTTG
AGGAACGCGTTACCCGGTTTCAGATAATGCAAAGCTATGGACATGTATAT
ACGTGTCGTGGGGCTGGGGAGCGAATGTGCGTGGCTTGCCTACTGCGGTA
TTTTGTATTTTACGTACTACTACTACTACACTGACTGTTTTCTGTATCAT
AGTTTTAAAGTACACTTGTAACAAAGCACAACACACCAGCAAAGCAAACA
CAAACAAAAACGAGCGAAGCAGAGCACAAGCAAACACAATCAACTGCCAA
AGCAAACACAAGCCACAGAGGACATCAGCTCTGGGCATTTCTGATTTGAC
CAAAGGCGGGACTGTCGTCACAACGCAACAATCGCTGGGTTGATAAACCG
TGATAAATCGCACGGAAGTTATTAAAAAAAAATCACCACACACTAATTAT
AAGTAGTGCTGAAATTTTAATGTGTCAAAAGTTGGCACATAATGCGGGTA
AGTGTTGTAAGGGTTAACTCATGTTTTTGTGTTTTTTTTGTCTTGATTGT
GTCAAACGAACAGATGAAGCTTATCACCGCGTCGGGGTTGGTGGAGCGTC
TGAAGGTTAACGGTTCGTTGGCACGTGCCGCCATCCGTGAGCTCGAGGAG
AAGGGCCTCATCCGGAAGGTAGACGCGCACCACGCACAGGTCATCTACAC
CCGCGCCACCAACGTGGAAGAGTAG back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig110:901147..907221+ >mRNA_D-herbacea_F_contig110.926.1 ID=mRNA_D-herbacea_F_contig110.926.1|Name=mRNA_D-herbacea_F_contig110.926.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=666bp|location=Sequence derived from alignment at D-herbacea_F_contig110:901147..907221+ (Desmarestia herbacea DmunF female)
CAGCCGCCGAAGACGCAGCAAAAGTCGAAGGAGCAGAAGATGGCCGCGGC
CATGGCCGGTGGCAAGGGCCGCAAAAAGCAGCCGCCGAAGACGCAGCAAA
AGTCGAAGGAGCAGAAGATGGCCGCGGCCATGGCCGGTGGCAAGGGCCGC
AAAAAGAAGTGGTCGAAGGGTAAGGTCAGGGAGAAGGTGGCCAACCAGGT
CCTCTTCAACGAGGACACGTACACCCGTTGCCTGGCCGAGGTACCTAAGA
AGTGGTCGAAGGGTAAGGTCAGGGAGAAGGTGGCCAACCAGGTCCTCTTC
AACGAGGACACGTACACCCGTTGCCTGGCCGAGGTACCTAAGATGAAGCT
TATCACCGCGTCGGGGTTGGTGGAGCGTCTGAAGGTTAACGGTTCGTTGG
CACGTGCCGCCATCCGTGAGCTCGAGGAGAAGGGCCTCATCCGGAAGGTA
GACGCGCACCACGCACAGGTCATCTACACCCGCGCCACCAACGTGGAAGA
GTAGATGAAGCTTATCACCGCGTCGGGGTTGGTGGAGCGTCTGAAGGTTA
ACGGTTCGTTGGCACGTGCCGCCATCCGTGAGCTCGAGGAGAAGGGCCTC
ATCCGGAAGGTAGACGCGCACCACGCACAGGTCATCTACACCCGCGCCAC
CAACGTGGAAGAGTAG back to top
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