prot_D-herbacea_F_contig110.926.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig110.926.1
Unique Nameprot_D-herbacea_F_contig110.926.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length111
Homology
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: D8LTW6_ECTSI (40S ribosomal protein S25 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTW6_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 2.620e-67
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
Query:    2 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE 110
            PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE
Sbjct:    2 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE 110          
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A835ZCY0_9STRA (40S ribosomal protein S25 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY0_9STRA)

HSP 1 Score: 157 bits (397), Expect = 8.620e-48
Identity = 81/108 (75.00%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    2 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVE 109
            PPK QQKSKEQK AAAMAGGK RKKKWSK K R+K+ N+VLF E TY R + EVPKMKL+T S LVERLK+NGSLARAAIRELEEKG+IR+V  H AQ++YTRATN E
Sbjct:    2 PPKVQQKSKEQKAAAAMAGGKSRKKKWSKNKARDKILNEVLFKEPTYERMMNEVPKMKLVTTSALVERLKINGSLARAAIRELEEKGVIRRVSHHSAQLVYTRATNTE 109          
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: F0YAB4_AURAN (40S ribosomal protein S25 n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YAB4_AURAN)

HSP 1 Score: 156 bits (394), Expect = 2.390e-47
Identity = 81/103 (78.64%), Postives = 92/103 (89.32%), Query Frame = 0
Query:    2 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTR 104
            PPK QQKSKE KMAAAMAGGK +KKKWSKGKVREK+AN+VLF+EDTY R LAE+PKMKLIT S LVERLKVNG+LARAAI+EL+EKGLI++V  HH Q I+TR
Sbjct:    2 PPKVQQKSKEAKMAAAMAGGKSKKKKWSKGKVREKMANKVLFDEDTYARLLAEIPKMKLITPSALVERLKVNGALARAAIKELQEKGLIKQVSYHHTQWIFTR 104          
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: W7TVF9_9STRA (40S ribosomal protein S25 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVF9_9STRA)

HSP 1 Score: 155 bits (391), Expect = 7.300e-47
Identity = 81/110 (73.64%), Postives = 95/110 (86.36%), Query Frame = 0
Query:    2 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYT-RCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE 110
            PPK QQK+KEQK+AAAMAGGK +KKKWSKGK+REKVAN+VLF+E+ YT R L E+PK KLIT S LVERLK+NGSLARAA+REL+EKGLI+ V  HH+Q+IYTRAT   E
Sbjct:    2 PPKVQQKTKEQKLAAAMAGGKSKKKKWSKGKMREKVANKVLFDEEMYTNRLLTEIPKSKLITPSALVERLKINGSLARAALRELKEKGLIKPVSVHHSQIIYTRATAAAE 111          
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A7S3Y488_HETAK (40S ribosomal protein S25 n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3Y488_HETAK)

HSP 1 Score: 153 bits (387), Expect = 4.310e-46
Identity = 81/109 (74.31%), Postives = 93/109 (85.32%), Query Frame = 0
Query:    2 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE 110
            PPKTQQKSKEQKMAAA+AGGK RKKKWSKGKVREK+AN+VL++EDTY R L E+PKMKLIT S LVERLKVNG+LARA++ EL EKGLI++V  H +Q IYTR T   E
Sbjct:   14 PPKTQQKSKEQKMAAALAGGKSRKKKWSKGKVREKMANKVLYDEDTYERLLTEIPKMKLITPSALVERLKVNGALARASLLELHEKGLIKEVARHGSQQIYTRTTGDAE 122          
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A7S2G994_9STRA (40S ribosomal protein S25 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G994_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.360e-44
Identity = 79/108 (73.15%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    2 PPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVE 109
            PPKTQQKSKE KMAAAMAGGKG+KKKWSKGKVREKVAN+VLF E+ Y R   EVPKMKLIT S LVERLK+ GSLARAAI+ELE + +I+++  H +Q +YTRAT VE
Sbjct:    2 PPKTQQKSKEAKMAAAMAGGKGKKKKWSKGKVREKVANKVLFEEELYERLKTEVPKMKLITPSALVERLKIGGSLARAAIKELESEEMIKRLSYHSSQWVYTRATAVE 109          
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: F0WED2_9STRA (40S ribosomal protein S25 n=2 Tax=Albugo TaxID=65356 RepID=F0WED2_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.160e-44
Identity = 81/111 (72.97%), Postives = 97/111 (87.39%), Query Frame = 0
Query:    2 PPKTQQKSKEQKMAAAMAGGKGR-KKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRA-TNVEE 110
            PPKTQQK+KEQKMAAAMAGG+G+ KKKWSK KVREKVAN+VL++++TY R L+EVPKMKLITAS +VERLKVN +LAR++IR+LE  G I +V AHH Q+IYTRA TN EE
Sbjct:    2 PPKTQQKTKEQKMAAAMAGGRGKGKKKWSKCKVREKVANKVLYDQETYDRLLSEVPKMKLITASAIVERLKVNATLARSSIRQLESDGTIARVLAHHTQLIYTRAATNAEE 112          
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A485LJ93_9STRA (40S ribosomal protein S25 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A485LJ93_9STRA)

HSP 1 Score: 140 bits (354), Expect = 3.060e-41
Identity = 76/105 (72.38%), Postives = 90/105 (85.71%), Query Frame = 0
Query:    2 PPKTQQKSKEQKMAAAMAGGKGR-KKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRA 105
            PPKTQQK+KEQKMAAA+AGG+G+ KKKWSKGKVREK AN+VLF+++TY R   EVPKMKLITAS +VERLKVN +LARAAI ELE+KG I+ V  H  Q+IYTR+
Sbjct:    2 PPKTQQKTKEQKMAAALAGGRGKGKKKWSKGKVREKTANKVLFDQETYERMCKEVPKMKLITASAVVERLKVNATLARAAILELEQKGEIKCVTKHRCQMIYTRS 106          
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A067CYE5_SAPPC (40S ribosomal protein S25 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CYE5_SAPPC)

HSP 1 Score: 136 bits (342), Expect = 2.060e-39
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0
Query:    2 PPKTQQKSKEQKMAAAMAGGKGR-KKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVE 109
            PPKTQQK+KEQKMAAA+AG +G+ KKKWSKGK REK  N+VL++++ Y R   EVPKMKLITAS +VERLKVN +LARA IRELE KG I+ V  H AQ+IYTRA + E
Sbjct:    2 PPKTQQKTKEQKMAAALAGSRGKGKKKWSKGKAREKTQNKVLYDQEAYERMCKEVPKMKLITASAIVERLKVNAALARATIRELELKGDIKVVSKHSAQLIYTRAISAE 110          
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Match: A0A7S3HEM3_9STRA (40S ribosomal protein S25 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S3HEM3_9STRA)

HSP 1 Score: 135 bits (340), Expect = 5.280e-39
Identity = 72/106 (67.92%), Postives = 86/106 (81.13%), Query Frame = 0
Query:    3 PKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNV 108
            PK QQK+KEQK+AAA+AGGK +KKKWSKGK+REK+  +VLF+ED + R   EVPKMKLIT S LVERLK+NGSLARAA + L E+G I K++ HHAQ IYTR T V
Sbjct:   13 PKVQQKTKEQKLAAALAGGKSKKKKWSKGKLREKMNAKVLFDEDGWKRLQEEVPKMKLITPSALVERLKINGSLARAACKYLLEEGKISKIETHHAQSIYTRVTAV 118          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig110.926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTW6_ECTSI2.620e-67100.0040S ribosomal protein S25 n=2 Tax=Ectocarpus TaxID... [more]
A0A835ZCY0_9STRA8.620e-4875.0040S ribosomal protein S25 n=2 Tax=Tribonema minus ... [more]
F0YAB4_AURAN2.390e-4778.6440S ribosomal protein S25 n=2 Tax=Pelagomonadales ... [more]
W7TVF9_9STRA7.300e-4773.6440S ribosomal protein S25 n=2 Tax=Monodopsidaceae ... [more]
A0A7S3Y488_HETAK4.310e-4674.3140S ribosomal protein S25 n=2 Tax=Sar TaxID=269873... [more]
A0A7S2G994_9STRA1.360e-4473.1540S ribosomal protein S25 n=1 Tax=Florenciella par... [more]
F0WED2_9STRA4.160e-4472.9740S ribosomal protein S25 n=2 Tax=Albugo TaxID=653... [more]
A0A485LJ93_9STRA3.060e-4172.3840S ribosomal protein S25 n=7 Tax=Aphanomyces TaxI... [more]
A0A067CYE5_SAPPC2.060e-3967.8940S ribosomal protein S25 n=4 Tax=Saprolegniaceae ... [more]
A0A7S3HEM3_9STRA5.280e-3967.9240S ribosomal protein S25 n=2 Tax=Eukaryota TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availableGENE3D1.10.10.2780coord: 21..110
e-value: 1.4E-36
score: 126.4
NoneNo IPR availablePANTHERPTHR12850:SF5RIBOSOMAL PROTEIN S25coord: 3..107
NoneNo IPR availablePRODOMPD012268coord: 41..107
e-value: 2.0E-18
score: 221.0
IPR004977Ribosomal protein S25PFAMPF03297Ribosomal_S25coord: 6..105
e-value: 3.5E-43
score: 145.9
IPR004977Ribosomal protein S25PANTHERPTHR12850FAMILY NOT NAMEDcoord: 3..107
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 50..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig110contigD-herbacea_F_contig110:901147..907221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig110.926.1mRNA_D-herbacea_F_contig110.926.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig110 901147..907221 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig110.926.1 ID=prot_D-herbacea_F_contig110.926.1|Name=mRNA_D-herbacea_F_contig110.926.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=111bp
QPPKTQQKSKEQKMAAAMAGGKGRKKKWSKGKVREKVANQVLFNEDTYTR
CLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQV
IYTRATNVEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR004977Ribosomal_S25