mRNA_D-herbacea_F_contig11.846.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: B5LWH6_9PHYC (Putative VV A32 ATPase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWH6_9PHYC) HSP 1 Score: 394 bits (1011), Expect = 5.700e-136 Identity = 183/263 (69.58%), Postives = 221/263 (84.03%), Query Frame = 1
Query: 1 LENMGERTLNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWFVSDKERYLDKEK 789
L +M E+T+ LSAF+ R C FNA+V+GKKHTGKSTLI+DIL++L K +PR CVFSGTEESNGFYK+FVPG FI+DD + E L IV++QK+ AMQKQL E LD+RI IVLDDVGYKK++LKSEIIRQIFMNGRHH I L+VACQYCMDV DLRTNADYVYVLKQNN+SSIKNLHE YFG FEK+K+FQTVL+ACTQ+YQCLVLDNTKPSTM DVCFW+KAK+ R F+ GC + W +H++WF+++K+RYL+ +K
Sbjct: 9 LSHMAEKTIKLSAFNPRTACSTFFNAVVIGKKHTGKSTLIKDILYHLHKKKVPRMCVFSGTEESNGFYKEFVPGLFIYDDSDVENKLNEIVDSQKETAMQKQLGEASEDLDSRIAIVLDDVGYKKNILKSEIIRQIFMNGRHHQIYLVVACQYCMDVGQDLRTNADYVYVLKQNNMSSIKNLHETYFGTFEKKKDFQTVLEACTQDYQCLVLDNTKPSTMTTDVCFWFKAKYSRNFKFGCSQLWEYHDRWFMTEKQRYLNDKK 271
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: Q6XM75_9PHYC (FirrV-1-A12 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM75_9PHYC) HSP 1 Score: 378 bits (971), Expect = 9.840e-130 Identity = 175/260 (67.31%), Postives = 217/260 (83.46%), Query Frame = 1
Query: 10 MGERTLNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWFVSDKERYLDKEK 789
M ERT+ LSAF+ +A C FNA+V+GKKHTGKSTLI+DIL+ + K +PR CVFSGTEESNGFY++F+P FIFDD E L IVE+QKK+ MQKQL E +D+RIV+VLDDVGYKK+ LK EI+RQIFMNGRHH I LIVACQYCMD+A+DLRTNADYV+VLKQNN++SIKNLHE YFG+FEK+K+FQTVL+ACT +YQCLVLDNTKPST DVCFWYKAK+G++++ GCP W +H +W++S+K+RY ++K
Sbjct: 1 MDERTIKLSAFNAKAACSKHFNAVVIGKKHTGKSTLIKDILYNVHKQKVPRICVFSGTEESNGFYREFIPDLFIFDDSMVEEKLTQIVESQKKIGMQKQLGECGDDVDSRIVVVLDDVGYKKNTLKCEILRQIFMNGRHHQISLIVACQYCMDLAIDLRTNADYVFVLKQNNMNSIKNLHETYFGSFEKKKDFQTVLEACTADYQCLVLDNTKPSTNTTDVCFWYKAKYGKEYKFGCPLLWEYHGRWYMSEKQRYQSQQK 260
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: D8LP63_ECTSI (Adenosinetriphosphatase n=2 Tax=root TaxID=1 RepID=D8LP63_ECTSI) HSP 1 Score: 256 bits (655), Expect = 6.050e-82 Identity = 125/255 (49.02%), Postives = 176/255 (69.02%), Query Frame = 1
Query: 13 GERTLNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWFVSDKERYL 777
G +NL FD RA NA+V+GK++TGKS +I ++L+YL+K +PRACVFS TEESN F+ + +P +FIFD+KN E L IVE QK+L +Q+ + EI+ D R+VIVLDD+GY + L S+I+ IFMNGRH+ I LIVA Q+ M + LR+N DYV LK+ N + ++NL+EN+FG FEK F+ DACT+++ CL+L+NT S ++ D WYKA R F+ G EFW +H++ +VS ++RYL
Sbjct: 13 GSINVNLKRFDCRAAMSVKCNAVVIGKRNTGKSVVIAELLYYLNKQKVPRACVFSATEESNRFFCRHIPDSFIFDEKNVEGKLTEIVEQQKRLQLQRDIGEIDPDTDLRVVIVLDDMGYNRKALTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVICLKEGNKNVMRNLYENFFGVFEKPVHFKNAFDACTKDFGCLILNNTVTSVLVNDTVNWYKATPNRVFKFGSREFWEYHDERYVSIQDRYL 267
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A6H5KKN2_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN2_9PHAE) HSP 1 Score: 255 bits (651), Expect = 6.050e-74 Identity = 126/255 (49.41%), Postives = 174/255 (68.24%), Query Frame = 1
Query: 13 GERTLNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWFVSDKERYL 777
G +NL FD RA NA+V+GK++TGKS LI ++L+YLSK +PRACVFS TEESN F+ + +P +FIFD+K+ E L IVE QK+L +Q+ + EI+ D RIVIVLDD+GY + +L S+I+ IFMNGRH+ I LIVA Q+ M + LR+N DYV LK+ N + ++NL+EN+FG FEK F+ ACT+++ CL+L+NT S ++ D WY+A R F+ G EFW +HN +VS +RYL
Sbjct: 465 GSINVNLRRFDCRAAMAVKCNAVVIGKRNTGKSVLIAELLYYLSKQKVPRACVFSATEESNRFFCRHIPDSFIFDEKHVEAKLIEIVEQQKRLQLQRDIGEIDEDTDLRIVIVLDDMGYNRKILSSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVICLKEGNKNVMRNLYENFFGVFEKPVHFKNAFYACTKDFGCLILNNTVASVLVNDTVHWYEATPNRVFKFGSKEFWKYHNDRYVSIHDRYL 719
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A0P0YNS0_9PHYC (Uncharacterized protein n=1 Tax=Yellowstone lake phycodnavirus 3 TaxID=1586715 RepID=A0A0P0YNS0_9PHYC) HSP 1 Score: 199 bits (507), Expect = 2.490e-59 Identity = 99/225 (44.00%), Postives = 138/225 (61.33%), Query Frame = 1
Query: 79 IVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWF 753
+ +GK+ TGKSTL+ DIL++ K LP SGTEE NG+YKQF+P F+F D N E +E ++E QK+L + + I++DD Y + ++ IRQ+FMNGRH I ++ QYCMD+ +RTN DYV+ L+ N + +NL++ +FG F F V+DACT+NY+CLVLDNT S I D FWYKA R FR+G P FW +H + +
Sbjct: 71 VFIGKRGTGKSTLVTDILWH--KKHLPAGIAMSGTEEGNGYYKQFIPDIFVFGDYNKEA-IEKLIERQKRLLSTGRCSPV--------FILMDDCMYDRSFMRDTCIRQLFMNGRHWKIFFMMTTQYCMDMTPMIRTNVDYVFALRDNVRQNRENLYKAFFGVFPTYDSFSQVMDACTENYECLVLDNTSKSNKITDCVFWYKAPLRRGFRVGGPAFWQYHQRHY 284
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A6G6XNI4_9PHYC (Uncharacterized protein n=1 Tax=Dishui Lake phycodnavirus 2 TaxID=2704071 RepID=A0A6G6XNI4_9PHYC) HSP 1 Score: 194 bits (492), Expect = 1.010e-57 Identity = 100/225 (44.44%), Postives = 136/225 (60.44%), Query Frame = 1
Query: 79 IVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWF 753
+ +GK+ TGKSTL+ DIL+Y K +P V SGTEE N +Y + VP FI+ D + E +E +E Q+KL K + ++LDD Y LK IRQ FMNGRH I ++ QYCMD+ LR N DYV++L++N + + + L++++FG F F V+DACT+NY+CLVLDNT S I D FWYKA + FR+G PE WA HNK +
Sbjct: 20 VFIGKRGTGKSTLVADILYY--KKHIPAGLVLSGTEEGNHYYSKHVPDLFIYGDYDKEA-IERAIERQRKLVSAG-------KQNCGCFLLLDDCMYDNRFLKDTCIRQCFMNGRHWKIFFMLTMQYCMDLPPALRANVDYVFILRENIIQNREKLYKSFFGIFPSFDMFNKVMDACTENYECLVLDNTVKSNRIQDCVFWYKANIRQNFRVGAPELWAVHNKMY 234
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A7S6NYT7_9PHYC (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A7S6NYT7_9PHYC) HSP 1 Score: 193 bits (490), Expect = 2.020e-57 Identity = 96/225 (42.67%), Postives = 140/225 (62.22%), Query Frame = 1
Query: 79 IVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWF 753
+ +GK++TGKSTL+ DILF+ K LP V S TEE N +Y+Q+VP FI+ D + E +E +++ QK+L K + ++LDD Y +K IRQ FMNGRH I ++ QYCMD+ LR N DYV++L++N + + + L++++FG F + F V+D+CT+NY+CLVLDNT S I D FWYKAK + F++G P++W H K F
Sbjct: 20 VFIGKRNTGKSTLVTDILFH--KKHLPAGIVLSATEEGNHYYQQYVPDLFIYGDYDREA-IERVMDRQKRLVGMG-------KTNCGAFLLLDDCMYDSKFMKDTCIRQCFMNGRHWKIFFMLTMQYCMDLPPALRANVDYVFILRENIIQNREKLYKSFFGIFPTFEMFNKVMDSCTENYECLVLDNTSKSNRIEDCVFWYKAKLRKNFKVGAPQYWQTHKKMF 234
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A6G6XP69_9PHYC (Uncharacterized protein n=1 Tax=Dishui Lake phycodnavirus 4 TaxID=2704072 RepID=A0A6G6XP69_9PHYC) HSP 1 Score: 193 bits (490), Expect = 2.340e-57 Identity = 105/244 (43.03%), Postives = 149/244 (61.07%), Query Frame = 1
Query: 25 LNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGR-KFRLGCPEFWAFHNKWF 753
L L FD+ + + +GK++TGKS LI+DI++Y K +P V SGTEE NGFY F+P FI+++ N E +E ++ QK LA K + I+LDD Y LK ++RQIFMNGRH I I++ QYCMD+ LR N DYV++L++N V++ + L +N+FG F + F +DACT+N++CLVLDNT S I D FWY+AK+ KF++G +FWA H K +
Sbjct: 5 LQLRKFDVSKMTDDKI-CVFIGKRNTGKSFLIRDIMYY--KKHIPTGIVQSGTEEGNGFYGTFIPDLFIYNEYNQEA-IERVMARQKALAKAG-------KHNNGTFILLDDCMYDNKFLKDTVMRQIFMNGRHFKIFFILSMQYCMDLPPALRANIDYVFILRENIVANRERLWKNFFGIFPTFELFSKTMDACTENFECLVLDNTVKSNRIEDCVFWYRAKYPPPKFKVGSSQFWAVHKKMY 237
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: E5ES94_9PHYC (Uncharacterized protein n=3 Tax=unclassified Prasinovirus TaxID=880158 RepID=E5ES94_9PHYC) HSP 1 Score: 192 bits (488), Expect = 4.040e-57 Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 1
Query: 79 IVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWF 753
+ +GK++TGKSTL+ DIL++ K LP V S TEE N +Y+Q++P FI+ D + E +E +++ QK+L K + ++LDD Y +K IRQ FMNGRH I ++ QYCMD+ LR N DY+++L++N + + + L +N+FG F + F V+D+CT+NY+CLVLDNT S I D FWYKA + FR+G PEFW H K F
Sbjct: 20 VFIGKRNTGKSTLVTDILYH--KKHLPAGIVLSATEEGNHYYQQYIPDLFIYGDYDREA-IERVMDRQKRLVGAG-------KKNCGAFLLLDDCMYDSKFMKDTCIRQCFMNGRHWKIFFMLTMQYCMDLPPALRANIDYIFILRENIIQNREKLFKNFFGIFPSFEMFNKVMDSCTENYECLVLDNTSKSNKIEDCVFWYKATLRKNFRVGAPEFWQTHKKMF 234
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A835Z5I5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I5_9STRA) HSP 1 Score: 193 bits (490), Expect = 4.210e-57 Identity = 97/251 (38.65%), Postives = 154/251 (61.35%), Query Frame = 1
Query: 25 LNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWFVSDKERYL 777
+++ FD+ K F ++ GK+ +GKS L +DI+F+L + PR C+FS TE +NGF+ +FVPG FI + L I++ QK L M+++L +I DTR+++VLDD Y + +L S ++R+I MNGRH+ I LIV QY +D+A LR N D LK N + + + +++ G +E F+ V ++CT N++C +DNT ST D+ +YKA R FR G P W FH++ ++S+++ +L
Sbjct: 9 ISVKRFDMSKLTKKHFTLVLTGKRGSGKSFLCKDIIFHLHEAKYPRCCIFSQTENANGFFSEFVPGIFIHSPFDLNV-LANIIKQQKDLIMRQKLGQIPADQDTRLLLVLDDCAYDRRILASPVMREIMMNGRHYFISLIVTLQYLVDLAPSLRANVDVALFLKDNIRGNRERVWKHFAGFYENFHVFEAVFESCTANFECFCVDNTLSSTRHEDIVSYYKAS-DRDFRFGHPSLWKFHDRVYLSEEDEFL 257 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig11.846.1 >prot_D-herbacea_F_contig11.846.1 ID=prot_D-herbacea_F_contig11.846.1|Name=mRNA_D-herbacea_F_contig11.846.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=261bp MGERTLNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPback to top mRNA from alignment at D-herbacea_F_contig11:834853..835644- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig11.846.1 ID=mRNA_D-herbacea_F_contig11.846.1|Name=mRNA_D-herbacea_F_contig11.846.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=792bp|location=Sequence derived from alignment at D-herbacea_F_contig11:834853..835644- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig11:834853..835644- >mRNA_D-herbacea_F_contig11.846.1 ID=mRNA_D-herbacea_F_contig11.846.1|Name=mRNA_D-herbacea_F_contig11.846.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1566bp|location=Sequence derived from alignment at D-herbacea_F_contig11:834853..835644- (Desmarestia herbacea DmunF female)back to top |