mRNA_D-herbacea_F_contig11.846.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig11.846.1
Unique NamemRNA_D-herbacea_F_contig11.846.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: B5LWH6_9PHYC (Putative VV A32 ATPase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWH6_9PHYC)

HSP 1 Score: 394 bits (1011), Expect = 5.700e-136
Identity = 183/263 (69.58%), Postives = 221/263 (84.03%), Query Frame = 1
Query:    1 LENMGERTLNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWFVSDKERYLDKEK 789
            L +M E+T+ LSAF+ R  C   FNA+V+GKKHTGKSTLI+DIL++L K  +PR CVFSGTEESNGFYK+FVPG FI+DD + E  L  IV++QK+ AMQKQL E    LD+RI IVLDDVGYKK++LKSEIIRQIFMNGRHH I L+VACQYCMDV  DLRTNADYVYVLKQNN+SSIKNLHE YFG FEK+K+FQTVL+ACTQ+YQCLVLDNTKPSTM  DVCFW+KAK+ R F+ GC + W +H++WF+++K+RYL+ +K
Sbjct:    9 LSHMAEKTIKLSAFNPRTACSTFFNAVVIGKKHTGKSTLIKDILYHLHKKKVPRMCVFSGTEESNGFYKEFVPGLFIYDDSDVENKLNEIVDSQKETAMQKQLGEASEDLDSRIAIVLDDVGYKKNILKSEIIRQIFMNGRHHQIYLVVACQYCMDVGQDLRTNADYVYVLKQNNMSSIKNLHETYFGTFEKKKDFQTVLEACTQDYQCLVLDNTKPSTMTTDVCFWFKAKYSRNFKFGCSQLWEYHDRWFMTEKQRYLNDKK 271          
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: Q6XM75_9PHYC (FirrV-1-A12 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM75_9PHYC)

HSP 1 Score: 378 bits (971), Expect = 9.840e-130
Identity = 175/260 (67.31%), Postives = 217/260 (83.46%), Query Frame = 1
Query:   10 MGERTLNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWFVSDKERYLDKEK 789
            M ERT+ LSAF+ +A C   FNA+V+GKKHTGKSTLI+DIL+ + K  +PR CVFSGTEESNGFY++F+P  FIFDD   E  L  IVE+QKK+ MQKQL E    +D+RIV+VLDDVGYKK+ LK EI+RQIFMNGRHH I LIVACQYCMD+A+DLRTNADYV+VLKQNN++SIKNLHE YFG+FEK+K+FQTVL+ACT +YQCLVLDNTKPST   DVCFWYKAK+G++++ GCP  W +H +W++S+K+RY  ++K
Sbjct:    1 MDERTIKLSAFNAKAACSKHFNAVVIGKKHTGKSTLIKDILYNVHKQKVPRICVFSGTEESNGFYREFIPDLFIFDDSMVEEKLTQIVESQKKIGMQKQLGECGDDVDSRIVVVLDDVGYKKNTLKCEILRQIFMNGRHHQISLIVACQYCMDLAIDLRTNADYVFVLKQNNMNSIKNLHETYFGSFEKKKDFQTVLEACTADYQCLVLDNTKPSTNTTDVCFWYKAKYGKEYKFGCPLLWEYHGRWYMSEKQRYQSQQK 260          
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: D8LP63_ECTSI (Adenosinetriphosphatase n=2 Tax=root TaxID=1 RepID=D8LP63_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 6.050e-82
Identity = 125/255 (49.02%), Postives = 176/255 (69.02%), Query Frame = 1
Query:   13 GERTLNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWFVSDKERYL 777
            G   +NL  FD RA      NA+V+GK++TGKS +I ++L+YL+K  +PRACVFS TEESN F+ + +P +FIFD+KN E  L  IVE QK+L +Q+ + EI+   D R+VIVLDD+GY +  L S+I+  IFMNGRH+ I LIVA Q+ M +   LR+N DYV  LK+ N + ++NL+EN+FG FEK   F+   DACT+++ CL+L+NT  S ++ D   WYKA   R F+ G  EFW +H++ +VS ++RYL
Sbjct:   13 GSINVNLKRFDCRAAMSVKCNAVVIGKRNTGKSVVIAELLYYLNKQKVPRACVFSATEESNRFFCRHIPDSFIFDEKNVEGKLTEIVEQQKRLQLQRDIGEIDPDTDLRVVIVLDDMGYNRKALTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVICLKEGNKNVMRNLYENFFGVFEKPVHFKNAFDACTKDFGCLILNNTVTSVLVNDTVNWYKATPNRVFKFGSREFWEYHDERYVSIQDRYL 267          
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A6H5KKN2_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN2_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 6.050e-74
Identity = 126/255 (49.41%), Postives = 174/255 (68.24%), Query Frame = 1
Query:   13 GERTLNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWFVSDKERYL 777
            G   +NL  FD RA      NA+V+GK++TGKS LI ++L+YLSK  +PRACVFS TEESN F+ + +P +FIFD+K+ E  L  IVE QK+L +Q+ + EI+   D RIVIVLDD+GY + +L S+I+  IFMNGRH+ I LIVA Q+ M +   LR+N DYV  LK+ N + ++NL+EN+FG FEK   F+    ACT+++ CL+L+NT  S ++ D   WY+A   R F+ G  EFW +HN  +VS  +RYL
Sbjct:  465 GSINVNLRRFDCRAAMAVKCNAVVIGKRNTGKSVLIAELLYYLSKQKVPRACVFSATEESNRFFCRHIPDSFIFDEKHVEAKLIEIVEQQKRLQLQRDIGEIDEDTDLRIVIVLDDMGYNRKILSSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVICLKEGNKNVMRNLYENFFGVFEKPVHFKNAFYACTKDFGCLILNNTVASVLVNDTVHWYEATPNRVFKFGSKEFWKYHNDRYVSIHDRYL 719          
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A0P0YNS0_9PHYC (Uncharacterized protein n=1 Tax=Yellowstone lake phycodnavirus 3 TaxID=1586715 RepID=A0A0P0YNS0_9PHYC)

HSP 1 Score: 199 bits (507), Expect = 2.490e-59
Identity = 99/225 (44.00%), Postives = 138/225 (61.33%), Query Frame = 1
Query:   79 IVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWF 753
            + +GK+ TGKSTL+ DIL++  K  LP     SGTEE NG+YKQF+P  F+F D N E  +E ++E QK+L    +   +         I++DD  Y +  ++   IRQ+FMNGRH  I  ++  QYCMD+   +RTN DYV+ L+ N   + +NL++ +FG F     F  V+DACT+NY+CLVLDNT  S  I D  FWYKA   R FR+G P FW +H + +
Sbjct:   71 VFIGKRGTGKSTLVTDILWH--KKHLPAGIAMSGTEEGNGYYKQFIPDIFVFGDYNKEA-IEKLIERQKRLLSTGRCSPV--------FILMDDCMYDRSFMRDTCIRQLFMNGRHWKIFFMMTTQYCMDMTPMIRTNVDYVFALRDNVRQNRENLYKAFFGVFPTYDSFSQVMDACTENYECLVLDNTSKSNKITDCVFWYKAPLRRGFRVGGPAFWQYHQRHY 284          
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A6G6XNI4_9PHYC (Uncharacterized protein n=1 Tax=Dishui Lake phycodnavirus 2 TaxID=2704071 RepID=A0A6G6XNI4_9PHYC)

HSP 1 Score: 194 bits (492), Expect = 1.010e-57
Identity = 100/225 (44.44%), Postives = 136/225 (60.44%), Query Frame = 1
Query:   79 IVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWF 753
            + +GK+ TGKSTL+ DIL+Y  K  +P   V SGTEE N +Y + VP  FI+ D + E  +E  +E Q+KL           K +    ++LDD  Y    LK   IRQ FMNGRH  I  ++  QYCMD+   LR N DYV++L++N + + + L++++FG F     F  V+DACT+NY+CLVLDNT  S  I D  FWYKA   + FR+G PE WA HNK +
Sbjct:   20 VFIGKRGTGKSTLVADILYY--KKHIPAGLVLSGTEEGNHYYSKHVPDLFIYGDYDKEA-IERAIERQRKLVSAG-------KQNCGCFLLLDDCMYDNRFLKDTCIRQCFMNGRHWKIFFMLTMQYCMDLPPALRANVDYVFILRENIIQNREKLYKSFFGIFPSFDMFNKVMDACTENYECLVLDNTVKSNRIQDCVFWYKANIRQNFRVGAPELWAVHNKMY 234          
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A7S6NYT7_9PHYC (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A7S6NYT7_9PHYC)

HSP 1 Score: 193 bits (490), Expect = 2.020e-57
Identity = 96/225 (42.67%), Postives = 140/225 (62.22%), Query Frame = 1
Query:   79 IVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWF 753
            + +GK++TGKSTL+ DILF+  K  LP   V S TEE N +Y+Q+VP  FI+ D + E  +E +++ QK+L           K +    ++LDD  Y    +K   IRQ FMNGRH  I  ++  QYCMD+   LR N DYV++L++N + + + L++++FG F   + F  V+D+CT+NY+CLVLDNT  S  I D  FWYKAK  + F++G P++W  H K F
Sbjct:   20 VFIGKRNTGKSTLVTDILFH--KKHLPAGIVLSATEEGNHYYQQYVPDLFIYGDYDREA-IERVMDRQKRLVGMG-------KTNCGAFLLLDDCMYDSKFMKDTCIRQCFMNGRHWKIFFMLTMQYCMDLPPALRANVDYVFILRENIIQNREKLYKSFFGIFPTFEMFNKVMDSCTENYECLVLDNTSKSNRIEDCVFWYKAKLRKNFKVGAPQYWQTHKKMF 234          
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A6G6XP69_9PHYC (Uncharacterized protein n=1 Tax=Dishui Lake phycodnavirus 4 TaxID=2704072 RepID=A0A6G6XP69_9PHYC)

HSP 1 Score: 193 bits (490), Expect = 2.340e-57
Identity = 105/244 (43.03%), Postives = 149/244 (61.07%), Query Frame = 1
Query:   25 LNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGR-KFRLGCPEFWAFHNKWF 753
            L L  FD+     +    + +GK++TGKS LI+DI++Y  K  +P   V SGTEE NGFY  F+P  FI+++ N E  +E ++  QK LA          K +    I+LDD  Y    LK  ++RQIFMNGRH  I  I++ QYCMD+   LR N DYV++L++N V++ + L +N+FG F   + F   +DACT+N++CLVLDNT  S  I D  FWY+AK+   KF++G  +FWA H K +
Sbjct:    5 LQLRKFDVSKMTDDKI-CVFIGKRNTGKSFLIRDIMYY--KKHIPTGIVQSGTEEGNGFYGTFIPDLFIYNEYNQEA-IERVMARQKALAKAG-------KHNNGTFILLDDCMYDNKFLKDTVMRQIFMNGRHFKIFFILSMQYCMDLPPALRANIDYVFILRENIVANRERLWKNFFGIFPTFELFSKTMDACTENFECLVLDNTVKSNRIEDCVFWYRAKYPPPKFKVGSSQFWAVHKKMY 237          
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: E5ES94_9PHYC (Uncharacterized protein n=3 Tax=unclassified Prasinovirus TaxID=880158 RepID=E5ES94_9PHYC)

HSP 1 Score: 192 bits (488), Expect = 4.040e-57
Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 1
Query:   79 IVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWF 753
            + +GK++TGKSTL+ DIL++  K  LP   V S TEE N +Y+Q++P  FI+ D + E  +E +++ QK+L           K +    ++LDD  Y    +K   IRQ FMNGRH  I  ++  QYCMD+   LR N DY+++L++N + + + L +N+FG F   + F  V+D+CT+NY+CLVLDNT  S  I D  FWYKA   + FR+G PEFW  H K F
Sbjct:   20 VFIGKRNTGKSTLVTDILYH--KKHLPAGIVLSATEEGNHYYQQYIPDLFIYGDYDREA-IERVMDRQKRLVGAG-------KKNCGAFLLLDDCMYDSKFMKDTCIRQCFMNGRHWKIFFMLTMQYCMDLPPALRANIDYIFILRENIIQNREKLFKNFFGIFPSFEMFNKVMDSCTENYECLVLDNTSKSNKIEDCVFWYKATLRKNFRVGAPEFWQTHKKMF 234          
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Match: A0A835Z5I5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I5_9STRA)

HSP 1 Score: 193 bits (490), Expect = 4.210e-57
Identity = 97/251 (38.65%), Postives = 154/251 (61.35%), Query Frame = 1
Query:   25 LNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLPRACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQLQEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQYCMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDACTQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWFVSDKERYL 777
            +++  FD+    K  F  ++ GK+ +GKS L +DI+F+L +   PR C+FS TE +NGF+ +FVPG FI    +    L  I++ QK L M+++L +I    DTR+++VLDD  Y + +L S ++R+I MNGRH+ I LIV  QY +D+A  LR N D    LK N   + + + +++ G +E    F+ V ++CT N++C  +DNT  ST   D+  +YKA   R FR G P  W FH++ ++S+++ +L
Sbjct:    9 ISVKRFDMSKLTKKHFTLVLTGKRGSGKSFLCKDIIFHLHEAKYPRCCIFSQTENANGFFSEFVPGIFIHSPFDLNV-LANIIKQQKDLIMRQKLGQIPADQDTRLLLVLDDCAYDRRILASPVMREIMMNGRHYFISLIVTLQYLVDLAPSLRANVDVALFLKDNIRGNRERVWKHFAGFYENFHVFEAVFESCTANFECFCVDNTLSSTRHEDIVSYYKAS-DRDFRFGHPSLWKFHDRVYLSEEDEFL 257          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig11.846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B5LWH6_9PHYC5.700e-13669.58Putative VV A32 ATPase n=1 Tax=Feldmannia species ... [more]
Q6XM75_9PHYC9.840e-13067.31FirrV-1-A12 n=1 Tax=Feldmannia irregularis virus a... [more]
D8LP63_ECTSI6.050e-8249.02Adenosinetriphosphatase n=2 Tax=root TaxID=1 RepID... [more]
A0A6H5KKN2_9PHAE6.050e-7449.41SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A0P0YNS0_9PHYC2.490e-5944.00Uncharacterized protein n=1 Tax=Yellowstone lake p... [more]
A0A6G6XNI4_9PHYC1.010e-5744.44Uncharacterized protein n=1 Tax=Dishui Lake phycod... [more]
A0A7S6NYT7_9PHYC2.020e-5742.67Uncharacterized protein n=3 Tax=root TaxID=1 RepID... [more]
A0A6G6XP69_9PHYC2.340e-5743.03Uncharacterized protein n=1 Tax=Dishui Lake phycod... [more]
E5ES94_9PHYC4.040e-5742.67Uncharacterized protein n=3 Tax=unclassified Prasi... [more]
A0A835Z5I5_9STRA4.210e-5738.65Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig11contigD-herbacea_F_contig11:834853..835644 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeViruses
Seed ortholog score262.7
Seed ortholog evalue1.8e-67
Seed eggNOG ortholog654926.Q8QNN5_ESV1K
Hectar predicted targeting categoryother localisation
EggNOG free text desc.adenyl ribonucleotide binding
EggNOG OGs4QASH@10239,4QVRB@35237
COG Functional cat.S
Best tax leveldsDNA viruses, no RNA stage
Best eggNOG OGNA|NA|NA
Exons1
Model size792
Cds size783
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927506.4197083-CDS-D-herbacea_F_contig11:834852..8356351622927506.4197083-CDS-D-herbacea_F_contig11:834852..835635Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 834853..835635 -
1690790206.1872957-CDS-D-herbacea_F_contig11:834852..8356351690790206.1872957-CDS-D-herbacea_F_contig11:834852..835635Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 834853..835635 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927506.4334016-UTR-D-herbacea_F_contig11:835635..8356441622927506.4334016-UTR-D-herbacea_F_contig11:835635..835644Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig11 835636..835644 -
1690790206.1962435-UTR-D-herbacea_F_contig11:835635..8356441690790206.1962435-UTR-D-herbacea_F_contig11:835635..835644Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig11 835636..835644 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig11.846.1prot_D-herbacea_F_contig11.846.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig11 834853..835635 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig11.846.1

>prot_D-herbacea_F_contig11.846.1 ID=prot_D-herbacea_F_contig11.846.1|Name=mRNA_D-herbacea_F_contig11.846.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=261bp
MGERTLNLSAFDIRACCKNLFNAIVVGKKHTGKSTLIQDILFYLSKTGLP
RACVFSGTEESNGFYKQFVPGTFIFDDKNAECHLEVIVENQKKLAMQKQL
QEIEVKLDTRIVIVLDDVGYKKDVLKSEIIRQIFMNGRHHHIILIVACQY
CMDVAVDLRTNADYVYVLKQNNVSSIKNLHENYFGAFEKRKEFQTVLDAC
TQNYQCLVLDNTKPSTMIPDVCFWYKAKFGRKFRLGCPEFWAFHNKWFVS
DKERYLDKEKK
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mRNA from alignment at D-herbacea_F_contig11:834853..835644-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig11.846.1 ID=mRNA_D-herbacea_F_contig11.846.1|Name=mRNA_D-herbacea_F_contig11.846.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=792bp|location=Sequence derived from alignment at D-herbacea_F_contig11:834853..835644- (Desmarestia herbacea DmunF female)
TTAGAAAACATGGGGGAAAGGACATTGAATCTATCGGCATTTGATATCAG AGCGTGTTGTAAGAACCTTTTTAACGCCATTGTCGTGGGTAAGAAGCACA CCGGGAAGAGTACGCTAATCCAGGATATCTTGTTCTACCTATCGAAGACA GGCCTGCCCAGGGCTTGTGTTTTTAGTGGGACTGAAGAATCAAATGGGTT TTACAAACAGTTCGTACCAGGGACCTTTATATTCGACGACAAGAATGCTG AATGTCATTTGGAGGTTATCGTGGAGAATCAGAAAAAGCTTGCAATGCAG AAGCAGTTGCAGGAGATTGAAGTGAAATTGGACACACGTATCGTAATAGT ATTGGATGACGTAGGATACAAGAAGGATGTGTTAAAGAGCGAAATCATTC GTCAAATATTTATGAACGGGAGACATCATCATATTATCCTCATCGTCGCG TGCCAGTACTGTATGGACGTTGCGGTAGACCTCCGTACCAACGCTGACTA TGTTTACGTCTTGAAACAAAACAATGTATCATCGATCAAGAACCTCCATG AGAATTATTTCGGAGCCTTCGAGAAGAGGAAAGAGTTCCAGACAGTTTTA GACGCTTGCACACAGAATTACCAATGTCTGGTGTTGGACAATACAAAGCC GAGCACAATGATTCCCGACGTTTGTTTCTGGTACAAGGCCAAGTTCGGCA GAAAGTTTCGTCTTGGATGCCCAGAATTTTGGGCGTTTCACAATAAGTGG TTCGTCAGCGACAAGGAAAGGTACCTGGATAAAGAGAAAAAA
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Coding sequence (CDS) from alignment at D-herbacea_F_contig11:834853..835644-

>mRNA_D-herbacea_F_contig11.846.1 ID=mRNA_D-herbacea_F_contig11.846.1|Name=mRNA_D-herbacea_F_contig11.846.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1566bp|location=Sequence derived from alignment at D-herbacea_F_contig11:834853..835644- (Desmarestia herbacea DmunF female)
ATGGGGGAAAGGACATTGAATCTATCGGCATTTGATATCAGAGCGTGTTG
TAAGAACCTTTTTAACGCCATTGTCGTGGGTAAGAAGCACACCGGGAAGA
GTACGCTAATCCAGGATATCTTGTTCTACCTATCGAAGACAGGCCTGCCC
AGGGCTTGTGTTTTTAGTGGGACTGAAGAATCAAATGGGTTTTACAAACA
GTTCGTACCAGGGACCTTTATATTCGACGACAAGAATGCTGAATGTCATT
TGGAGGTTATCGTGGAGAATCAGAAAAAGCTTGCAATGCAGAAGCAGTTG
CAGGAGATTGAAGTGAAATTGGACACACGTATCGTAATAGTATTGGATGA
CGTAGGATACAAGAAGGATGTGTTAAAGAGCGAAATCATTCGTCAAATAT
TTATGAACGGGAGACATCATCATATTATCCTCATCGTCGCGTGCCAGTAC
TGTATGGACGTTGCGGTAGACCTCCGTACCAACGCTGACTATGTTTACGT
CTTGAAACAAAACAATGTATCATCGATCAAGAACCTCCATGAGAATTATT
TCGGAGCCTTCGAGAAGAGGAAAGAGTTCCAGACAGTTTTAGACGCTTGC
ACACAGAATTACCAATGTCTGGTGTTGGACAATACAAAGCCGAGCACAAT
GATTCCCGACGTTTGTTTCTGGTACAAGGCCAAGTTCGGCAGAAAGTTTC
GTCTTGGATGCCCAGAATTTTGGGCGTTTCACAATAAGTGGTTCGTCAGC
GACAAGGAAAGGTACCTGGATAAAGAGAAAAAAATGGGGGAAAGGACATT
GAATCTATCGGCATTTGATATCAGAGCGTGTTGTAAGAACCTTTTTAACG
CCATTGTCGTGGGTAAGAAGCACACCGGGAAGAGTACGCTAATCCAGGAT
ATCTTGTTCTACCTATCGAAGACAGGCCTGCCCAGGGCTTGTGTTTTTAG
TGGGACTGAAGAATCAAATGGGTTTTACAAACAGTTCGTACCAGGGACCT
TTATATTCGACGACAAGAATGCTGAATGTCATTTGGAGGTTATCGTGGAG
AATCAGAAAAAGCTTGCAATGCAGAAGCAGTTGCAGGAGATTGAAGTGAA
ATTGGACACACGTATCGTAATAGTATTGGATGACGTAGGATACAAGAAGG
ATGTGTTAAAGAGCGAAATCATTCGTCAAATATTTATGAACGGGAGACAT
CATCATATTATCCTCATCGTCGCGTGCCAGTACTGTATGGACGTTGCGGT
AGACCTCCGTACCAACGCTGACTATGTTTACGTCTTGAAACAAAACAATG
TATCATCGATCAAGAACCTCCATGAGAATTATTTCGGAGCCTTCGAGAAG
AGGAAAGAGTTCCAGACAGTTTTAGACGCTTGCACACAGAATTACCAATG
TCTGGTGTTGGACAATACAAAGCCGAGCACAATGATTCCCGACGTTTGTT
TCTGGTACAAGGCCAAGTTCGGCAGAAAGTTTCGTCTTGGATGCCCAGAA
TTTTGGGCGTTTCACAATAAGTGGTTCGTCAGCGACAAGGAAAGGTACCT
GGATAAAGAGAAAAAA
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