mRNA_D-herbacea_F_contig11.837.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig11.837.1 vs. uniprot
Match: A0A6P0SSH2_9CYAN (IS607 family transposase n=5 Tax=unclassified Moorena TaxID=2683338 RepID=A0A6P0SSH2_9CYAN) HSP 1 Score: 180 bits (456), Expect = 5.020e-54 Identity = 90/194 (46.39%), Postives = 127/194 (65.46%), Query Frame = 1
Query: 13 YVSADFLKKEFSISSSTARRWKHSGDVRVVETAGGHFRYNIDDIVNIRSSTKKRKNIPDRRRIAYCRVSSSKQKDDLVRQEECFTKTHPQHEIIRDVGSGINFKRKGFLRMVDLVLRGEVEEIVVAHKDRLCRFAFDFLSWICSREDTKLIIQDQIIRSSEQELTEDLVAIIHVFSCRLHGKRRYNKKNKSEED 594
YV +S+ T RW SG ++ ++T GG RY+++ +V+IRS + DR I Y RVSS QK+DL +Q + +P EII+D+GSG+NFKRKG ++D V+ G + +VVAHKDRLCRF FD +SW+CS+ TK+++ D+ S EQE+ ED++A+IHVFSCRL+G R+Y KNK ED
Sbjct: 7 YVPPRVASNRLGVSTKTLERWLESGKIQGIKTPGGQRRYDLNSVVSIRSEKIR----TDRSTILYARVSSRSQKNDLEQQVQFLQSRYPDAEIIKDIGSGLNFKRKGLQALLDRVIGGSCKYVVVAHKDRLCRFGFDLISWLCSKFQTKILVLDEKNLSPEQEMVEDVLAVIHVFSCRLYGLRKY--KNKILED 194
BLAST of mRNA_D-herbacea_F_contig11.837.1 vs. uniprot
Match: A0A6P0PP25_9CYAN (IS607 family transposase n=7 Tax=unclassified Moorena TaxID=2683338 RepID=A0A6P0PP25_9CYAN) HSP 1 Score: 180 bits (456), Expect = 5.170e-54 Identity = 91/188 (48.40%), Postives = 124/188 (65.96%), Query Frame = 1
Query: 13 YVSADFLKKEFSISSSTARRWKHSGDVRVVETAGGHFRYNIDDIVNIRSSTKKRKNIPDRRRIAYCRVSSSKQKDDLVRQEECFTKTHPQHEIIRDVGSGINFKRKGFLRMVDLVLRGEVEEIVVAHKDRLCRFAFDFLSWICSREDTKLIIQDQIIRSSEQELTEDLVAIIHVFSCRLHGKRRYNKK 576
YV +S+ T RW G ++ ++T GG RYN+D +V+I STKK +R I Y RVSS Q+DDL +Q + +P E+IRD+GSG+NFKRKG ++D VL G + IVVAHKDRLCRF FD +SW+CS+ TK+++ D+ S EQE+ ED++AIIHVFSCRL+G R+Y +K
Sbjct: 7 YVPPRVAATRLGVSTRTLERWLDEGKIQGIKTPGGQRRYNLDSVVSI--STKKTDR-DERATILYARVSSRSQRDDLDQQVQFLKSRYPDAEVIRDIGSGLNFKRKGLHSLLDRVLSGTCKYIVVAHKDRLCRFGFDLISWLCSKFKTKILVLDEKNLSPEQEMVEDVLAIIHVFSCRLYGLRKYKRK 191
BLAST of mRNA_D-herbacea_F_contig11.837.1 vs. uniprot
Match: A0A6P0SVG0_9CYAN (IS607 family transposase n=2 Tax=unclassified Moorena TaxID=2683338 RepID=A0A6P0SVG0_9CYAN) HSP 1 Score: 179 bits (454), Expect = 1.040e-53 Identity = 89/188 (47.34%), Postives = 123/188 (65.43%), Query Frame = 1
Query: 13 YVSADFLKKEFSISSSTARRWKHSGDVRVVETAGGHFRYNIDDIVNIRSSTKKRKNIPDRRRIAYCRVSSSKQKDDLVRQEECFTKTHPQHEIIRDVGSGINFKRKGFLRMVDLVLRGEVEEIVVAHKDRLCRFAFDFLSWICSREDTKLIIQDQIIRSSEQELTEDLVAIIHVFSCRLHGKRRYNKK 576
YV +S+ T RW G ++ ++T GG RY++D +V+I + R DR I Y RVSS QK+DL +Q + +P+ EII+DVGSG+NFKRKG ++D VL G + IVVAHKDRLCRF FD +SW+CS+ TK+++ D+ S EQE+ ED++A+IHVFSCRL+G R+Y KK
Sbjct: 7 YVPPRVASIRLGVSTRTLERWLEEGKIQGIKTPGGQRRYDLDSVVSIPTKKTDR---GDRATILYARVSSRSQKNDLEQQVQFLKSRYPKAEIIKDVGSGLNFKRKGLQSLLDRVLNGTCKYIVVAHKDRLCRFGFDLISWLCSKFQTKILVLDEKNLSPEQEMVEDVLAVIHVFSCRLYGLRKYKKK 191
BLAST of mRNA_D-herbacea_F_contig11.837.1 vs. uniprot
Match: A0A6P0IUF8_9CYAN (IS607 family transposase n=3 Tax=unclassified Moorena TaxID=2683338 RepID=A0A6P0IUF8_9CYAN) HSP 1 Score: 173 bits (439), Expect = 1.930e-51 Identity = 86/188 (45.74%), Postives = 121/188 (64.36%), Query Frame = 1
Query: 13 YVSADFLKKEFSISSSTARRWKHSGDVRVVETAGGHFRYNIDDIVNIRSSTKKRKNIPDRRRIAYCRVSSSKQKDDLVRQEECFTKTHPQHEIIRDVGSGINFKRKGFLRMVDLVLRGEVEEIVVAHKDRLCRFAFDFLSWICSREDTKLIIQDQIIRSSEQELTEDLVAIIHVFSCRLHGKRRYNKK 576
YV +S+ T RW + G ++ + T GG RY++D +V+I + N R I Y RVSS QK+DL +Q + +P EIIRD+GSG+NF RKG ++D VL G + IVVAHKDRLCRF FD +SW+CS+ +TK+++ D+ S EQE+ ED++A+IHVFSCRL+G R+Y +K
Sbjct: 7 YVPPRVAAARLGVSTKTLERWLNEGKIQGIRTPGGQRRYDLDSVVSIPCTKTTTDN---RATILYARVSSRSQKNDLEQQVQFLKSRYPDAEIIRDIGSGLNFSRKGLRTLLDRVLDGTCKYIVVAHKDRLCRFGFDLVSWLCSKFETKILVLDEKNLSPEQEMVEDVLAVIHVFSCRLYGLRKYKQK 191
BLAST of mRNA_D-herbacea_F_contig11.837.1 vs. uniprot
Match: A0A1U7MZ12_9CYAN (DNA invertase n=12 Tax=Moorena TaxID=1155738 RepID=A0A1U7MZ12_9CYAN) HSP 1 Score: 171 bits (434), Expect = 9.470e-51 Identity = 84/192 (43.75%), Postives = 122/192 (63.54%), Query Frame = 1
Query: 1 INMPYVSADFLKKEFSISSSTARRWKHSGDVRVVETAGGHFRYNIDDIVNIRSSTKKRKNIPDRRRIAYCRVSSSKQKDDLVRQEECFTKTHPQHEIIRDVGSGINFKRKGFLRMVDLVLRGEVEEIVVAHKDRLCRFAFDFLSWICSREDTKLIIQDQIIRSSEQELTEDLVAIIHVFSCRLHGKRRYNKK 576
+++ YV + +S+ T RW +G ++ ++T GG RY++D +V+I + P R I Y RVSS QK DL +Q +P E+I D+GSG+NFKRKG ++D VL E IVVAHKDRLCRF FD +SW+C + +TK+++ D+ S EQE+ ED++AI+HVFSCRL+G R+Y K+
Sbjct: 1 MSVNYVPPRVAAQRLGVSTRTLERWLEAGKIKGIKTPGGQRRYDLDSVVSIPPAK------PKRDIILYARVSSRSQKSDLEQQVRFLKSRYPGCEVIFDIGSGLNFKRKGLQSLLDRVLSNTCELIVVAHKDRLCRFGFDLISWLCGKFETKILVLDETHLSPEQEMVEDILAIVHVFSCRLYGLRKYKKR 186
BLAST of mRNA_D-herbacea_F_contig11.837.1 vs. uniprot
Match: A0A382F2J5_9ZZZZ (Resolvase/invertase-type recombinase catalytic domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382F2J5_9ZZZZ) HSP 1 Score: 170 bits (431), Expect = 2.380e-50 Identity = 83/193 (43.01%), Postives = 126/193 (65.28%), Query Frame = 1
Query: 13 YVSADFLKKEFSISSSTARRWKHSGDVRVVETAGGHFRYNIDDIVNIRSSTKKRKNIPDRRRIAYCRVSSSKQKDDLVRQEECFTKTHPQHEIIRDVGSGINFKRKGFLRMVDLVLRGEVEEIVVAHKDRLCRFAFDFLSWICSREDTKLIIQDQIIRSSEQELTEDLVAIIHVFSCRLHGKRRYNKKNKSEE 591
YVS K F +S+ST RRW ++ + T + RY DI +++ + K + ++++ YCRVSS KQ DDL RQ++ +P HEII D+GSGIN+KRKG L +++ G +EE+VVAHKDRL RFAF+ + W+ + KL++ ++ I S E++LT+D+++IIH+FSCR G R+Y K KS++
Sbjct: 2 YVSQKEACKFFGVSTSTLRRWDKQNKIKTIRTPSNYRRY---DISSVKQTKNKNSIVMSKKKMCYCRVSSKKQMDDLERQKDYLKSKYPNHEIISDIGSGINWKRKGLLSILEQSNNGLIEEVVVAHKDRLARFAFELIQWLLEKNGCKLVVLNEPI-SEEEKLTDDILSIIHIFSCRKMGMRKYKKDGKSKD 190
BLAST of mRNA_D-herbacea_F_contig11.837.1 vs. uniprot
Match: K9X5D0_9NOST (Putative site-specific integrase-resolvase n=2 Tax=Nostocales TaxID=1161 RepID=K9X5D0_9NOST) HSP 1 Score: 169 bits (429), Expect = 5.740e-50 Identity = 84/188 (44.68%), Postives = 118/188 (62.77%), Query Frame = 1
Query: 13 YVSADFLKKEFSISSSTARRWKHSGDVRVVETAGGHFRYNIDDIVNIRSSTKKRKNIPDRRRIA-YCRVSSSKQKDDLVRQEECFTKTHPQHEIIRDVGSGINFKRKGFLRMVDLVLRGEVEEIVVAHKDRLCRFAFDFLSWICSREDTKLIIQDQIIRSSEQELTEDLVAIIHVFSCRLHGKRRYNK 573
YV +S+ T RW G + + T GG RYN+D ++ +R R N D R + Y RVSS QK+DL +Q E +P EII D+GSG+NF+RKG ++D VL + +V+AHKDRLCRF FD +SW+C+R+ T++++ DQ S E+E+ ED++AIIHVFSCRL+G R+Y K
Sbjct: 5 YVPPRVAATRLGVSTKTLERWLQDGKIEGIFTQGGQRRYNLDSVIPVR-----RGNPADERAVLIYARVSSRSQKNDLSQQIEFLQSRYPDAEIIADIGSGLNFRRKGLQTLLDRVLTNTCKLVVIAHKDRLCRFGFDLISWLCARQQTEILVLDQKNLSPEREMVEDILAIIHVFSCRLYGLRKYKK 187
BLAST of mRNA_D-herbacea_F_contig11.837.1 vs. uniprot
Match: A0A8J7EZF4_9CYAN (IS607 family transposase n=9 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7EZF4_9CYAN) HSP 1 Score: 169 bits (428), Expect = 7.420e-50 Identity = 81/187 (43.32%), Postives = 116/187 (62.03%), Query Frame = 1
Query: 13 YVSADFLKKEFSISSSTARRWKHSGDVRVVETAGGHFRYNIDDIVNIRSSTKKRKNIPDRRRIAYCRVSSSKQKDDLVRQEECFTKTHPQHEIIRDVGSGINFKRKGFLRMVDLVLRGEVEEIVVAHKDRLCRFAFDFLSWICSREDTKLIIQDQIIRSSEQELTEDLVAIIHVFSCRLHGKRRYNK 573
YV + +S+ T RW +G + + T GG RYN+D ++ R +R + Y RVSS QK DL +Q +P EII D+GSG+NFKRKG ++D VL ++ +VVAHKDRLCRF FD +SW+C+R+ T++++ DQ S E+E+ ED++AI+HVFSCRL+G R+Y K
Sbjct: 5 YVPPRVAASKLGVSTKTLERWLEAGKIEGIFTQGGQRRYNLDSVIPPRPGNP----ADERVTVLYARVSSRSQKTDLEQQVNFLKSRYPDAEIITDIGSGLNFKRKGLQTLLDRVLSNSIKLVVVAHKDRLCRFGFDIISWLCARQQTEILVLDQKNLSPEREMVEDILAIVHVFSCRLYGLRKYKK 187
BLAST of mRNA_D-herbacea_F_contig11.837.1 vs. uniprot
Match: A0A1B7VAC1_9NOST (DNA invertase n=9 Tax=Nostocales TaxID=1161 RepID=A0A1B7VAC1_9NOST) HSP 1 Score: 167 bits (422), Expect = 6.560e-49 Identity = 84/188 (44.68%), Postives = 117/188 (62.23%), Query Frame = 1
Query: 13 YVSADFLKKEFSISSSTARRWKHSGDVRVVETAGGHFRYNIDDIVNIRSSTKKRKNIPDRRR-IAYCRVSSSKQKDDLVRQEECFTKTHPQHEIIRDVGSGINFKRKGFLRMVDLVLRGEVEEIVVAHKDRLCRFAFDFLSWICSREDTKLIIQDQIIRSSEQELTEDLVAIIHVFSCRLHGKRRYNK 573
YV +S+ T RW G + + T GG RYN+D I+ +R N PD R I Y RVSS QK+DL +Q + +P EII D+GSG+NFKRKG ++D VL + +V+AHKDRLCRF FD +SW+C+R+ T++++ +Q S E+E+ ED++AIIHVFS RL+G R+Y K
Sbjct: 5 YVPPRVAATRLGVSTKTLERWLEDGKIEGIFTQGGQRRYNLDSIIPVRHG-----NPPDERATILYARVSSRSQKNDLEQQVQFLQSRYPDAEIITDIGSGLNFKRKGLQTLLDRVLGNTCKLVVIAHKDRLCRFGFDLISWLCARQQTQVLVLNQANLSPEREMVEDILAIIHVFSWRLYGLRKYKK 187
BLAST of mRNA_D-herbacea_F_contig11.837.1 vs. uniprot
Match: A0A1W9MU46_9DELT (DNA invertase n=1 Tax=Desulfobacteraceae bacterium IS3 TaxID=1934248 RepID=A0A1W9MU46_9DELT) HSP 1 Score: 165 bits (418), Expect = 1.780e-48 Identity = 82/194 (42.27%), Postives = 119/194 (61.34%), Query Frame = 1
Query: 7 MPYVSADFLKKEFSISSSTARRWKHSGDVRVVETAGGHFRYNIDDIVNIRSSTKKRKNIPDRRRIAYCRVSSSKQKDDLVRQEECFTKTHPQHEIIRDVGSGINFKRKGFLRMVDLVLRGEVEEIVVAHKDRLCRFAFDFLSWICSREDTKLIIQDQIIRSSEQELTEDLVAIIHVFSCRLHGKRRYNKKNKSE 588
M ++ + ++ + +T RRW + G +R ++T G Y+ D V I S+ +R++ YCRVSS KQKDDL RQ + P +EII D+GSG+NF+RKG L +++ V G+V E+VVAHKDRLCRF FD + W+ KL++ D +S + EL DL+AII VFSCR+HG R+Y + K +
Sbjct: 1 MKFMPSRKAREILGVHENTLRRWANEGKIRHIKTEAGQRLYDTDSFVGIHSA---------KRKVCYCRVSSHKQKDDLERQSAFMSGRCPGYEIITDIGSGLNFRRKGLLALLESVCGGDVSEVVVAHKDRLCRFGFDLVRWLIEYHGGKLVVLDNESQSPQSELVNDLLAIITVFSCRMHGLRKYRAEIKED 185 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig11.837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig11.837.1 >prot_D-herbacea_F_contig11.837.1 ID=prot_D-herbacea_F_contig11.837.1|Name=mRNA_D-herbacea_F_contig11.837.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=196bp MPYVSADFLKKEFSISSSTARRWKHSGDVRVVETAGGHFRYNIDDIVNIRback to top mRNA from alignment at D-herbacea_F_contig11:810227..810820- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig11.837.1 ID=mRNA_D-herbacea_F_contig11.837.1|Name=mRNA_D-herbacea_F_contig11.837.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=594bp|location=Sequence derived from alignment at D-herbacea_F_contig11:810227..810820- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig11:810227..810820- >mRNA_D-herbacea_F_contig11.837.1 ID=mRNA_D-herbacea_F_contig11.837.1|Name=mRNA_D-herbacea_F_contig11.837.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1176bp|location=Sequence derived from alignment at D-herbacea_F_contig11:810227..810820- (Desmarestia herbacea DmunF female)back to top |