mRNA_D-herbacea_F_contig1072.690.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1072.690.1
Unique NamemRNA_D-herbacea_F_contig1072.690.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 219 bits (558), Expect = 1.780e-56
Identity = 211/738 (28.59%), Postives = 315/738 (42.68%), Query Frame = 1
Query:  133 FDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGK--PLIYY--------RNKAVLG---FPGRNRLFSNSAPIASGAALRAGASRDVMEV---HRMLAHPSEDITRKTAEIMGIETTGQWGA-CETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYARQSVREH---KMAPKGEKCVFMGIPRNFPTGTVSVLL--------VRSRNIV--ERQAVQW-----------IDGPKKTGGDGTGSDDRGMKSAGDEII-VERGTPQLNENGV------------------------------------EDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
            F G C  C ++GH A DC     KN +     KG          V EV    A+   +  D    W  DSGAT HM+  +  +  Y +      V + D   +   G G   +  D     T+ + + +V Y+P L +NLLS    V+  GK   LI +        RN  +L      G+  +      +      R    +++      H  +   S+ I    AE M     G+  + CE+C   K  R   PK T  RAS   +    DV GPM   S G + Y V F+DD +++  V F+K K +        V+ Y+      +K +R+DNGGE+  + F+  L    I H+ T P  P+ NG AER    L E A  +M        +P+E  WA+A+  A    N+S T S +   +P+E  F + P   +L+ FG V Y    + +H   K+  K  KC+F+G    +P GT    L        +RSR+++  ER   ++           +  P K          +    A DE + VE+    + EN V                                    E++  C D        T DI EPRN  +A  ++   +W+KA ++E   ++EN  ++ V  P DK ++G++ ++K K   DG VEK+K RLVAQG+ Q EG+ Y E +SP     SIR LLA+A   D E+   D   AFL
Sbjct:  242 FHGLCHFCHERGHFARDCPKKNPKNKKFANVVKGEQQED-----VHEVTNQEALF-TSNDDSNCGWIIDSGATQHMTSEKNRLVNYVEFKQPCKVNLGDDRTIFAFGKGTYNLVADLGNGRTQNIALKEVLYLPDLKKNLLS----VQVMGKLGALIQFDGVQCKIERNSKLLATGELHGKLYMLKIIPGVEYINVAREAPDKNLWHCRFGHLGMNGISKLINENMAEGMNCSDHGKESSLCESCVMGKQHRTPFPKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVS-YVNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA----GMPKE-FWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVH--IPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNVEQNPQPILENNVPLQENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCADD------LTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFL 950          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A8J6L9W6_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L9W6_TENMO)

HSP 1 Score: 216 bits (549), Expect = 2.210e-55
Identity = 216/724 (29.83%), Postives = 329/724 (45.44%), Query Frame = 1
Query:  133 FDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKA-VLGFPGRNRLFSN-----------SAPIASGAALRAGAS-RDVMEV-HRMLAH-----PSEDITRKTAEIMGIETTGQWG------ACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGA-VGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGT---------GSDDR---------GMKSAG----------DEI----IV--ERGTPQLNENGVED----VLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
            F  +C+ C++ GH+A DC     KN + R + K A   + T   V E    +       S+++  W  DSGAT H+ +     S  K + PG  + +A+     +   G+     D  G + K + +     VP L  NLLS  K  E+ G  +I+ R+ A V+G  G  +L ++           +   ++G+   AG       EV HR L H      SE I++ T  ++G++             CE C Q K  R   PK+++ R S   +    DV GPM+  S+    Y + F+DDC+R+ VV+F++ KS+   A    +      Q   IK  +TDNGGE+  E F   L    IT   T P  P+ NG+AER    L + A  LM +      +P    WA+A+  A  + N+  + S   G++PYE+W GK P   H R FG  V    +     K   + ++ VF+G      +    V +   R +   + V++++G +K     T         G  D           M+SA           DEI    +V  ERG P+L   G       V    + G   ++A   I E    R AM S E DEW  A   E+  +++N  +K V RP D+ VIG++++ + K    G +E+ K RLVAQGF Q  GVH+ E ++P    +SIR+L ++AA  D  +R FD   A+L
Sbjct:  100 FKYRCYKCKEIGHKAADC-----KNKDFRASAKSA---EDTCLSVSECHLTS-------SNKRNTWCLDSGATSHLCNDERAFSEMK-SEPG-KINLANNGSTNITAQGKAMFTADVFGES-KNISLSKTLLVPDLRTNLLSVGKITEK-GCEVIFKRDNAFVVGNDGSVKLVADRIGELYYARERNKERSTGSVFAAGLPCTKTFEVWHRRLGHLNTRDMSEAISKGT--VLGLDVLKPMNFARDSIECEVCLQGKMVRTPFPKRSD-RTSELLELIHSDVCGPMRVESMSKARYFIEFIDDCSRWTVVRFLRSKSEAIEATKGFITMVENQQGKKIKTFQTDNGGEYTSEQFDNLLKGLGITRRFTIPHNPEQNGIAERKNRTLLDMARCLMLQS----GLP-PSFWAEAVNTANYIRNRCPSKSLG-GRTPYEVWTGKKPNVSHFREFGCRVFRLDRQPNRGKFDSRAKEGVFLGYSEE--SKGYRVWMPNERKVEITRDVKFLEGTEKKAEIFTEFVPDDLFKGETDEVESPRYVGIEMRSAEEVENPEEEVQDEIEEEPVVRRERGRPRLVRTGARGRPRKVCRFQEAGTAEIEAEAFISEI-PARIAMNSPEVDEWYDAMAVEIRSIIKNNTWKLVKRPDDREVIGSRIVLRNKYNAKGTLERRKARLVAQGFSQRPGVHFKETFAPVARLSSIRLLASIAAQYDMNIRQFDVTCAYL 792          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT)

HSP 1 Score: 214 bits (546), Expect = 2.970e-55
Identity = 201/712 (28.23%), Postives = 310/712 (43.54%), Query Frame = 1
Query:  130 KFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGFPGRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPSEDITRKTAEI----MGIETTGQ-----WGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPT----GTVSVLLVRSRNIVE-RQAVQWIDGPKKTGGDGTGSDDRGM---------KSAGDEIIVER------GTPQLNENGVEDVLA---------------------CDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
            KF G C  C++KGH A DC      +  +    KG   A        +  T    +  +  + +  W  DSGAT HM+  R  +S Y +     +V + D   +   G G   V      R  + V + +V Y+P L +NLLS V A+ +    + +  NK  +          N   +A G         ++++ H  +A    D  R         +G+    +       + E C + K  R   PK  + RAS   +    DV GPM   SLGG+ Y V F+DD +R+  V F+K KS+            +      IK + +DNGGE+   EF+  L +  I H+ + P  P  NGVAER    + E    ++       ++P E  WA+A+  +  V N+S T + ++  +PYE  F K P   +LR FG + Y      +  K+  K  K +FMG P           VS   +RSR+++   +     D    +  D    DD  +             DEI  +R      G  Q N+  V                           D+   +A   T DI EP N  +A   +   EW++A ++E   ++EN  ++ V+ PK K V+G+K ++K K  ++G V++YK RLVAQG+ Q EGV Y+E +SP     +IR LLA++ AK+ E+   D + AFL
Sbjct:  232 KFQGTCHYCKEKGHFARDCPKRINNSQRDGNQSKGKGSACCAQEKSEQNNTDEEALYTSDDENRCGWIIDSGATQHMTFERNRLSNYVEFKRPCSVNLGDNRSILAYGKGTYHVKAVVNDRI-QHVALQEVLYLPELDKNLLS-VHAMVKRDATVTFKENKCEIS--------RNLKILAVGEIQGKLYVLNIVKEHVNIAKQQPDTDRYLWHCRLGHLGMNNVNKLINENMVSGEACIKGKHHRCPYPKTADYRASEPFELVHSDVCGPMSVPSLGGSRYYVSFIDDYSRYIFVYFMKNKSEVLEKFKEFHTYAMNITGKPIKVLHSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAERMNRTVVETTRSMLSHA----HIPNE-FWAEAVNTSVYVRNRSPTKALND-ITPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGEHRMRTPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSENNSLIENETWELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFL 927          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A0V1KQY5_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A0V1KQY5_9BILA)

HSP 1 Score: 213 bits (542), Expect = 9.980e-55
Identity = 198/697 (28.41%), Postives = 305/697 (43.76%), Query Frame = 1
Query:  145 CFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWG-----------------KPLIYYRNKAVLGFPGRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPSEDITRKTAE---IMGIETTGQWGA-CETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGI-PRN-----FPTGTVSV----------LLVRSRNIVERQAVQWIDGPKKTGGDGTG---SDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
            C+NC+KKGH   +CRS +K N             K     +     VA    + R +  + W +D GA  H++  R   S  +   P   V I +  ++   G G I+V++   G+      ++DV YVP    + L ++ A    G                   L+ Y++  +     R RL  N++     A L  G +      H+ L H S +  +   +   + G+  T +    CE C      R    + TE R SV G+    DV GP  H S+GGN Y + F D+ + ++ V F+K K +    L + + +        ++ IRTD G EF   E    L  + I HE TPP TPQ NG+AER    L EKA  ++       N+PR  LWA+A+  A  + N+ +    +  K+PYE WFG+ PT +HLR FG   Y         K  PK  K +F+G  P N     F T    V           L +   +++ +   W+    K   D      +DD+  K         +   ++  N ++  L      + AM A  D   P    +A+E    ++W+++   E+  +  N  +     P D+  I  K ++K KI  DG+V KYK RLVA+G+ Q   + Y E ++P     S+R LLA+AA +D E+  FD + AFL
Sbjct:   31 CWNCKKKGHIRSECRSQRKLNSST---------LKDRTKSLNRTGFVARSWLDVRQEPNDGWLADFGAFKHITRNRHWFSTLEFIEP-QGVRIGNDKMIYAVGIGTIDVEVFN-GKQWIASVLNDVLYVPEFGSSCLFSLGAAAARGYRIMMDNFNIRFMMNNRTELVGYKDGDLYTLLIR-RLSDNTS---MSAMLTEGETHSFELWHQRLGHISVEKIKTMMQRKLVDGLRATAEEKFFCEGCVFGSMTRKPHKEVTERRQSVPGEIIHADVCGPFIHPSVGGNRYFICFKDESSGYRKVYFMKTKDEVLRCLKTALTEIKQETGRDVQRIRTDRGTEFANRELDNFLTEKKIVHEKTPPYTPQCNGMAERENRTLAEKARAMLHTR----NLPR-CLWAEAVHTAAYLLNR-IPNRKEITKTPYEEWFGRRPTVEHLRIFGCDAYVHIPDQHRRKFDPKARKVIFVGYGPSNKMFRVFDTNKHRVDKVTDVQFNESLQKRLVLIDGEEDSWMQTADKDEDDFLEYDITDDKTEKRGPGRPPGSKNKIKVISNPLKMELRSKSTERTAMLAAAD---PLTEEEALEGANAEKWKESMLEEISALHMNDTWILTDLPADRKTIQCKWVFKSKINSDGEVSKYKARLVAKGYSQRAEIDYFETFAPVVRYESVRTLLAIAADEDLEILQFDVKTAFL 703          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A438CI20_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CI20_VITVI)

HSP 1 Score: 213 bits (541), Expect = 2.670e-54
Identity = 187/684 (27.34%), Postives = 315/684 (46.05%), Query Frame = 1
Query:  130 KFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVP-EVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVL---------GFPGRNRLFSNSAPIASGAALRAGASRDVMEV----HRMLAHPSEDITRKTAEIMGIET--TGQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLRE--KAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVG-YARQSVREHKMAPKGEKCVFMGIPRN-----FPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
            KF GKCFNC K+GH++ DCR  KK   +E       ++  +T  V   ++  V + V    S+ KE W  D+GAT H+   +   S ++    G  V + +     + G G++ + +     + K + + +V YVP + +NL+S    +   G  L++  NK VL         G+        N   I      +A  S  ++E     H  L H + D  R+   +  I T        CETC + K  R +   ++ ER +        D+       + GGN Y + FVDD T++  V  +K K +     +    +        IK +R+D GGE+E  F     +  I HE T P +PQ NGVAER    L+E   A+++   L        + +W +A+L A  + NK      +  K+PYELW G+ P+  +LR +G +   A    ++ K+ PK   C+F+G   N     F     ++  +  + I+E +   + +           S  + M  + D+       P+ ++    +     D     ++      EP+  ++A+ S E   W++A ++E+  +++N  ++ V  P     + +K I+KRK+  DG ++KYK RLV +G+ Q+EG+ Y + YSP     SIRM+LA+AA ++ E+   D + AFL
Sbjct:  275 KFQGKCFNCGKQGHKSVDCRLPKKNKPKEAN-----VIDDITKNVYDIDLTAVVSEVNLVGSNPKEWW-IDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMT----SGKELTLTNVLYVPEIRKNLVSG-SLLNNHGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLGHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSF--QSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLP-------QNMWGEAILTANYLLNKVPKKKAE--KTPYELWKGRKPSYTYLRMWGCLAKVAIPPPKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKKTIMESRNASFFEDVFPCKSKEEPSSSKRMFESQDQNEEVEVEPRRSKRVRTEKSFGPDFLTFMLEG-----EPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQIEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFL 931          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID)

HSP 1 Score: 212 bits (540), Expect = 3.500e-54
Identity = 207/702 (29.49%), Postives = 310/702 (44.16%), Query Frame = 1
Query:  142 KCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGFPGRN--------RLFSNSAPIASGAALRAGASRDVMEV-HRMLAHPSED---ITRKTAEIMGI-----ETTGQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLV----------ADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKF-PTADHLRPFGAVGYAR--QSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQA-VQWIDG--------PKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
            KC  C+K GH A +C   KKKN  +R  E  A LAK       +  +  A+    R +  E W  DSGAT HM+  +  +  Y        V +AD +IL   G G + + +       K+V + DV +VP +   L S + AV + G  + +  +   +   G+         +L+  +  I S      G + D +++ H+   H   D   +  K   + G+     ET  +   CE C   K  R   PKK+        +    DV GPM   S+GG+ Y V F+DD +R+  V  +K KS+  A     V             +  +  +I+ +R+DNGGE+   EF      R I+ E T P +PQ NGVAER    L E A  ++      I     K WA+A+  AC V N+S T    E  +PYE+W  K  P   +L+ FG   Y     + R+ K   K   C+F+G P N      +   T  +   R    VE+   ++  DG        P+ T  D    D+         +   R   +LN    E     D     A  A +D  EP    +A+ S   + W+ A + E   ++EN  +K V  P DK ++G+K ++K K G DGK+++ K RLVAQG+ Q  G+ Y + ++P     SIR +LA+    D EL   D + AFL
Sbjct:  212 KCHYCKKTGHFAREC--YKKKNDLKR-KEGQAKLAKDEAVSDVQANSELALKSSNRIE-DENWWIDSGATQHMTPQKESIENYVAFKEPITVRLADESILYSYGKGDVHLTVKDTTEKVKIV-LKDVLFVPKIQNKLFS-LPAVTEKGYIVDFQGDSCGISIEGKRYSVGKKHGKLYKLNT-INSDQTCYIGNAMDEIDLWHQRYGHLGYDNLKLLNKKEMVNGLNFELKETVNR--NCEGCAMGKQHRQPFPKKSTNTTKGLLELIHSDVCGPMDVPSVGGSRYFVTFIDDYSRYTTVYMMKHKSEVLAKFTEFVNLVENRTGLKVKRLNVENQAIQRLRSDNGGEYTSTEFTSFCTDRGISREPTIPYSPQQNGVAERMNRTLLETARSMLHHAQKPI-----KFWAEAISTACYVRNRSPTAFLKE-TTPYEIWHRKKKPDVSNLKVFGCKSYVHVPDTKRKGKFDKKSISCIFVGYPSNENGFKFYDPQTRKMFRSRDVTFVEKDFDIEKFDGTNSNFEFFPESTEPDEP-EDNXXXXXNARPVRTRRPPERLNVLTGEWWNLID----AASIAIVDEEEPTTIEEALSSPNAELWKDAIQNEYDSLIENETWKLVEMPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFL 893          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: J9LCG1_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9LCG1_ACYPI)

HSP 1 Score: 212 bits (540), Expect = 3.910e-54
Identity = 210/747 (28.11%), Postives = 335/747 (44.85%), Query Frame = 1
Query:   25 HQIQQLGNSLPSTTAANHGTVTANREK------GKNRRLHHKFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSD----RKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPL------IYYRNKAVLGFPGR-NRLFS---NSAPIASG-AALRAGASRDVMEVHRMLAHPSEDITRKTAEIMGIETTGQWGA--CETCFQVKAKRHAVPKKTEERASVR-GQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKA--IILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAM------------QATLDIP------------EPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
            H +Q++      +   ++GT   N+EK       +N+R + K  GKC +C+K GH   +CR   K+  E   +E                 +  A+VG    D      EKW  DSGA+ HM+  +   + Y+       V I DG  +   G G I V   + G       + +V +VP L  NL S    +++  K +      I+ +N  ++G   R N++FS    + P+     A  A  +  +++ H +L+H +    R   + M I+ T       CE C  V  K+H  P       + + GQ    DV GPM+ +SLGG  Y VIF DD + +  V F+ +KS+        +        +S+  +R+D G E++  E +  LD+  I HE + P TPQ NG AER++  + E A  ++  + L        + LWA+A+  A    N++  T   EGK+PYELWF K P  ++L+ FG+  YA     +  K   KG K +F+G      T    +        + R  +  ++    +    TG++ +      +E +         E   +D    DD  QM +            +  L+ P            +P   ++AM     D W+ A + EML + +N  ++ V  P +K  I    IYK K   +G+V++YK RLV +G  QV G+ + E +SP     SIR++LA+AAA+   LR FD + AFL
Sbjct:  207 HDVQRVTAGSAFSAKKSYGT---NKEKHTKIGNSENQRNNDKKPGKCNHCKKPGHWKRECRIFLKEQKERNKSESN---------------SGNALVGVQSKDIEISESEKWYVDSGASDHMTSRKEWFTNYELFETQLPVHIGDGKYIMAIGKGNINVQA-KIGDKWVDSHLSNVLHVPDLKVNLFSCGACLDKGIKMVTDSDGCIFKKNNRIVGIGVRENKMFSMVLRTGPLQQADQANIAVKNLTLLQWHEILSHQNVQHVRNYLKHMRIQFTETKNKFFCEAC--VYGKQHREPFTLSNTKTTKPGQLIHSDVCGPMEVNSLGGKRYFVIFKDDYSNYTYVYFMSQKSEVKNKFELFLNTVKNQLNISVITLRSDCGLEYKNTEVKALLDKFGIKHETSVPYTPQQNGKAERSMRTIVEAARTMVYSKNLS-------KTLWAEAVNTAVYTINRTGNTG-QEGKTPYELWFNKTPDINNLKIFGSEVYAHIPKEKRRKWDQKGRKGIFVGYSEE--TKGYRICFDGKEVSLSRDVIFKVESVNPS----TGTEVKIRSEEEEEXVNLXXXXXXXEVNSDDEEKLDDDDQMPVAVEDQQQMILRDRGKLNKPIRYRDAFFSACNDPLTYKEAMTGNNIDNWKAAMDDEMLSLQKNETWQLVDLPINKNPINNGWIYKTKYKTNGEVDRYKARLVVKGCAQVHGIDFQETFSPVVKYDSIRVILAIAAARRLMLRQFDIKTAFL 918          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A0V1MB43_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V1MB43_9BILA)

HSP 1 Score: 211 bits (538), Expect = 6.360e-54
Identity = 206/720 (28.61%), Postives = 320/720 (44.44%), Query Frame = 1
Query:   79 GTVTANREKGKNRRLHHKFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGFPGRNR--------------LFSNSAPIASGAALRAGASRDVMEV-HRMLAHPSEDITRKTAE---IMGIETTGQWGA-CETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGI-PRN-----FPTG---TVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGM--KSAGDEIIVERGT--PQLNENGVEDVLACDDGGQMAMQ---------ATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
            G  T ++E  KN +   K + +C+NC+KKGH   +CRS +K N             K     +     VA    + R +  + W +DSGA  H++  R   S  +   P   V I +  ++   G G I+V++   G+      ++DV YVP    + L ++ A    G  +I   +   + F   NR              L   S    S +A+         E+ H+ L H S +  +   +   + G+  T +    CE C      R    + TE R SV G+    DV GP  H S+GGN Y + F D+ + ++ V F+K K +    L   + +        ++ IRTD G EF   EF   L  + I HE +PP TPQ NG+AER    L EKA  ++       N+P+  LWA+A+  A  + N+ +    +  K+PYE WFGK PT +HLR FG   Y         K   K  K +F+G  P N     F T       V  V+    ++++ V  IDG ++        D+  +  +   D+   +RG   P  + N ++ +     G  + M+         A L   +P    +A+     ++WR+A   E+  +  N  +     P D+  I  K I+K K    G+V KYK RLVA+G+ Q   + Y+E ++P     S+R LLA+AA +D E+  FD + AFL
Sbjct:  203 GKRTTSKETNKNSK---KRNIECWNCKKKGHIRSECRSQRKLNSST---------LKDRTKSLNRTGFVARSWLDIRQEPNDGWLADSGAFKHITRNRHWFSTLENIEP-QGVRIGNDKMIYAVGIGTIDVEVFN-GKQWIASVLNDVLYVPEFGSSCLFSLGAAAARGYKIIM--DNFNIRFMMNNRTELVGYKDGDLYTLLIRRSLDNTSMSAMLTEGETHSFELWHQRLGHISVEKIKTMVQRNLVDGLRATAKGKFFCEGCVLGSMTRKPHKEVTERRQSVPGEILHADVCGPFIHPSVGGNCYFICFKDESSGYRKVYFMKTKFEVLRCLKIAMTEIKQETGRDMQRIRTDEGTEFVNREFDNFLTEKKIVHEKSPPYTPQCNGMAERENRTLVEKARSMLHAR----NLPKG-LWAEAVHTAAYLLNR-IPNRKETTKTPYEKWFGKRPTVEHLRIFGCDAYVHIPDQHRKKFDRKARKVIFVGYGPSNKMFRVFDTNKHRVDEVTDVKFNESLQKRLV-LIDGEEEIWMQTADKDEDNIHKEDIPDDKTEKRGPGRPPGSRNKIKVI-----GNPLKMELRSKSTERTAMLAAADPLTEEEALRGANAEKWREAMLEEITALHMNNTWILTDLPSDRKTIQCKWIFKSKTNSHGEVSKYKARLVAKGYSQRAEIDYSETFAPVVRYESVRTLLAIAADEDLEILQFDVKTAFL 894          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT)

HSP 1 Score: 211 bits (538), Expect = 6.520e-54
Identity = 207/722 (28.67%), Postives = 316/722 (43.77%), Query Frame = 1
Query:  133 FDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFG--RIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYY-------RNKAVLGFPGRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPSEDITRKTAE---IMGIETTGQW---GACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYARQSVREHK-MAPKGEKCVFMGIPRNFPTGTVSVLL--------VRSRNIV--ERQAVQWIDGPK-KTGGD-----------------------GTGSDDRGMKSAGDEIIVERGTPQLNENGVEDV------------LACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
            F GKC NC+++GH A DC    K+N +    ++    A+       +  T    +  +       W  DSGAT HM+  ++ +S Y +      V + D   +   G G  RI  DL   G   + + + DV Y+P L +NLLS V+A+ + G  + +        RN  +L              +    A  A    ++   H    H   D   K  +   + G++          CE C   K  R   P    +RA+   +    DV GPM  +S+GG+ Y V F+DD TR+  V F+K K +  A     V         S+K +RTDNGGE+   EF+  L  + I H+ T P  P  NGV+ER    L E    +M      +     + WA+A+  A  + N+S TTS  E  +PYE  F + P   +LR FG   +A    ++ K    K  K VF+G    +P GT    L        +RSR+IV  E +   + DG   KT  D                       G  ++    ++  +E+ V+       EN + +                DD   +A   T DI EP + ++A       EW++A ++E   +++N  ++ V  PK K ++G++ ++K K   DG VE++K RLVAQG+ Q +G+ Y E +SP     SIR LLA+A   D E+   D + AFL
Sbjct:  227 FKGKCHNCQERGHYARDC---PKRNADSANRKESKGSARCAEKDDGDFITEDEALFTSDLLHNSGWIIDSGATQHMTFDKSNLSDYVEFKQPCIVNLGDNRSILAYGKGTYRIVADL---GDHVQNISLRDVLYLPDLEKNLLS-VRAMVKLGANVRFEGEGCEITRNSKLLAVGKMQGKLYMLKIVTVDHANIAKEDLNLKLWHYRYGHLGMDNVNKLMKGEMVQGMDCVMDGESDSVCEGCIMGKQHRTKYPSGVAKRATEPFELVHSDVCGPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTPV-----EFWAEAINTAVYLRNRSPTTSLKE-ITPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIG----YPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCSGKTCTDFYIPVDDVIPQVEIQDVPAVVIEGDHNELVDEENEREEVHVQPVGATYEENFMRETGNLGDKRQRRAPSRFDDKCYVADNLTADINEPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFL 931          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A438F828_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438F828_VITVI)

HSP 1 Score: 209 bits (532), Expect = 2.880e-53
Identity = 186/684 (27.19%), Postives = 312/684 (45.61%), Query Frame = 1
Query:  130 KFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVP-EVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVL---------GFPGRNRLFSNSAPIASGAALRAGASRDVMEV----HRMLAHPSEDITRKTAEIMGIET--TGQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLRE--KAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVG-YARQSVREHKMAPKGEKCVFMGIPRN-----FPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
            KF GKCFNC K+GH++ DCR  KK   +E       ++  +T  V   ++  V + V    S+ KE W  D+GAT H+   +   S ++    G  V + +     + G G++ + +     + K + + +V YVP + +NL+S    +   G  L++  NK VL         G+        N   I      +A  S  ++E     H  L H + D  R+   +  I T        CETC + K  R +   ++ ER +        D+       + GGN Y + FVDD T++  V  +K K +     +    +        IK +R+D GGE+E  F     +  I HE T P +PQ NGVAER    L+E   A+++   L        + +W +A+L A  + NK      +  K+PYELW G+ P+  +LR +G +   A    ++ K+ PK   C+F+G   N     F     ++  +    I+E +   + +           S  + M  + D+       P+ ++    +     D     ++      EP+  ++A+ S E   W++A ++E+  +++N  ++ V  P     + +K I+KRK+  DG ++KYK RLV +G+ Q EG+ Y + YSP     SIRM+LA+AA ++ E+   D +  FL
Sbjct:  172 KFQGKCFNCGKQGHKSVDCRLPKKNKPKEAN-----VIDDITKNVYDIDLTAVVSEVNLVGSNPKEWW-IDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMT----SGKELTLTNVLYVPEIRKNLVSG-SLLNNHGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLGHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSF--QSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLP-------QNMWEEAILTANYLLNKVPKKKAE--KTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCKSKEEPSSSKRMLESQDQNEEVEVEPRRSKRVRTEKSFGPDFLTFMLEG-----EPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTTFL 828          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9IUY0_PARCT1.780e-5628.59Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8J6L9W6_TENMO2.210e-5529.83Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A7D9D6Q5_PARCT2.970e-5528.23Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A0V1KQY5_9BILA9.980e-5528.41Retrovirus-related Pol polyprotein from transposon... [more]
A0A438CI20_VITVI2.670e-5427.34Retrovirus-related Pol polyprotein from transposon... [more]
A0A7M6DPI8_9CNID3.500e-5429.49Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
J9LCG1_ACYPI3.910e-5428.11Uncharacterized protein n=1 Tax=Acyrthosiphon pisu... [more]
A0A0V1MB43_9BILA6.360e-5428.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A6S7HNY1_PARCT6.520e-5428.67Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A438F828_VITVI2.880e-5327.19Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1072contigD-herbacea_F_contig1072:50648..53997 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score254.6
Seed ortholog evalue1.3e-64
Seed eggNOG ortholog400682.PAC_15703055
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3ACW4@33154,3BVPH@33208,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons5
Model size2109
Cds size2109
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1072.690.1prot_D-herbacea_F_contig1072.690.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1072 50648..53997 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927481.8368106-CDS-D-herbacea_F_contig1072:50647..507251622927481.8368106-CDS-D-herbacea_F_contig1072:50647..50725Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1072 50648..50725 +
1690790194.2750936-CDS-D-herbacea_F_contig1072:50647..507251690790194.2750936-CDS-D-herbacea_F_contig1072:50647..50725Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1072 50648..50725 +
1622927481.855707-CDS-D-herbacea_F_contig1072:51394..515211622927481.855707-CDS-D-herbacea_F_contig1072:51394..51521Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1072 51395..51521 +
1690790194.287022-CDS-D-herbacea_F_contig1072:51394..515211690790194.287022-CDS-D-herbacea_F_contig1072:51394..51521Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1072 51395..51521 +
1622927481.8690302-CDS-D-herbacea_F_contig1072:51653..521111622927481.8690302-CDS-D-herbacea_F_contig1072:51653..52111Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1072 51654..52111 +
1690790194.2948122-CDS-D-herbacea_F_contig1072:51653..521111690790194.2948122-CDS-D-herbacea_F_contig1072:51653..52111Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1072 51654..52111 +
1622927481.8802717-CDS-D-herbacea_F_contig1072:52204..532181622927481.8802717-CDS-D-herbacea_F_contig1072:52204..53218Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1072 52205..53218 +
1690790194.3026755-CDS-D-herbacea_F_contig1072:52204..532181690790194.3026755-CDS-D-herbacea_F_contig1072:52204..53218Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1072 52205..53218 +
1622927481.8902469-CDS-D-herbacea_F_contig1072:53565..539971622927481.8902469-CDS-D-herbacea_F_contig1072:53565..53997Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1072 53566..53997 +
1690790194.3142242-CDS-D-herbacea_F_contig1072:53565..539971690790194.3142242-CDS-D-herbacea_F_contig1072:53565..53997Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1072 53566..53997 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1072.690.1

>prot_D-herbacea_F_contig1072.690.1 ID=prot_D-herbacea_F_contig1072.690.1|Name=mRNA_D-herbacea_F_contig1072.690.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=703bp
NAVSQALTHQIQQLGNSLPSTTAANHGTVTANREKGKNRRLHHKFDGKCF
NCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVG
EARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVD
GFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIY
YRNKAVLGFPGRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPSEDI
TRKTAEIMGIETTGQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVD
VGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYI
TPQKLSIKCIRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERA
LGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGK
SPYELWFGKFPTADHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNF
PTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGMKSAGDEII
VERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDE
WRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYK
CRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQ
AFL
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mRNA from alignment at D-herbacea_F_contig1072:50648..53997+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1072.690.1 ID=mRNA_D-herbacea_F_contig1072.690.1|Name=mRNA_D-herbacea_F_contig1072.690.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=3350bp|location=Sequence derived from alignment at D-herbacea_F_contig1072:50648..53997+ (Desmarestia herbacea DmunF female)
AACGCAGTAAGTCAGGCACTGACCCATCAGATACAGCAGTTAGGAAACAG CCTACCATCAACTACTGCAGCAAATCACGTGACGCAAAACACCACTGCTG CACAACAGTTTCAAACACCCATCAAGTTCGATGTACCAGCATTCGAGGGT GATAGCACAGCAAGTTGGTTGACGTGGAGTCAAAGAGTCTTGTACCAGGC TAGGGCGAGTGGCTTTGAAAACGAACTGACTGCAGCCGTAGGGGATGGGC TGAGCGTTGGGGCTGATGTCTTCGACAGCAGTAACGTAGACCCCGTGAGA TTGCGAAATGCGCATGCAGCTTGGATGATACTGATCAACAGCTGCAGTGG AATGGCACTCGAAATTGTGCAGCGCAGCGACGCACCGAACGAAGCGTGGA GAAATCTTGAATTTCACTACAGAGCAAAAGGAACCAGAGAAATACTTCGT CTGTCCCATGAAATCAACGGAAAAACAATGGAACCCGGCAGTGACCCATT TAAGTTTATGATGGAAGTTGACAGGCTGGCAGCAGACCTTCACCGTTTGG GCGACAAATCCGTAACCGAACTCAGAAAGTGCGTGATTATTGTGTCTGGC CTGTCTGCTGATTTCGAGATGGAGTGTCGCATACTAGAGAACAACCCTGC TGGTCTTAACAGGGCTGAGATTGAGCGTGTTGTAGGAAATCAGTACAACA GACTTCTCAGGCAGCAACAGGACTCGAAGGCATTGTCAGCATCGAAGGGC ACCGTCACGGCAAATCGCGAAAAGGGGAAGAACAGAAGACTCCACCACAA GTTCGATGGTAAATGCTTCAATTGCAGGAAGAAAGGTCACCGCGCTGGAG ACTGCAGGAGCGCGAAGAAAAAGAGTGAAAAATCCGGAGCTACCGACGAC AGGAAGGAGGGCGGTGGCAGCGGTAGGTGCTACATCTGCGGAAGTGAGGA GCACCTTGCGCACAGGCACTGTGGACTGTGCAAGAGCCTTGAGCACCGGA CGCGAGACTGTGAGGAGCGCGGAGCTGAAAAGGGCGCAATGCTGGCAAAA CTGACTGTGCCGGTGGTTCCTGAGGTGAGAACAGTGGCGGCAATGGTGGG AGAAGCTCGTAGCGATAGGAAGGAAAAATGGGAATCAGATTCCGGCGCCA CATTCCACATGTCGCACACCCGCGCCGGAATGTCTGCTTATAAGAAGGCG TCACCGGGGACGAACGTTGAGATCGCCGACGGTAACATTCTACCGGTGGA CGGGTTCGGGAGAATCGAGGTGGATCTGGACCAACCGGGGCGTACAACCA AGATGGTGAAGATGGACGATGTCGCGTATGTGCCGGGACTCTCCCGAAAT CTGCTGTCTACTGTCAAAGCAGTGGAGCAATGGGGGAAACCGTTAATCTA CTATAGAAATAAAGCCGTTTTGGGGTTCCCGGGGAGGAATCGCTTGTTTT CAAATTCTGCCCCCGTAGGGGACTGTTTTCAGCTACAGGCGCGAGACGGA TCCCGAGGCAGGAGGCGGCTCTAGAGGCAAAATCTGACGGAGAACGGGTT GGTGAAGATCGCTTCGGGAGCGGCGCTGAGAGCGGGCGCATCCCGTGACG TCATGGAGGTCCATCGCATGCTTGCGCACCCGAGCGAGGACATTACAAGA AAGACGGCCGAGATTATGGGGATCGAGACGACGGGCCAGTGGGGGGCGTG TGAGACATGCTTCCAAGTTAAGGCGAAGCGACATGCCGTGCCAAAGAAGA CAGAAGAACGGGCGAGCGTGAGAGGACAGCGATTCTTCGTCGACGTGGGC GGGCCGATGAAGCACTCGAGTCTCGGCGGGAACAGCTACGTCGTCATTTT CGTGGACGACTGCACCCGCTTCAAGGTTGTAAAGTTCGTAAAGAAGAAGA GTGACACAACGGCCGCTCTCTTGTCTCTGGTTGCAGATTATATTACACCG CAGAAGCTGTCGATCAAGTGCATACGGACGGATAATGGTGGCGAGTTTGA GGGAGAATTTCAGCGCGAATTGGACCGGCGCAGCATCACGCACGAGCATA CCCCGCCAGACACGCCGCAGTACAATGGGGTGGCCGAACGTGCGCTTGGG CTTTTAAGAGAAAAGGCGATCATCCTGATGGAGGAGTTAGACGACGTCAT CAACGTGCCGCGAGAGAAGCTGTGGGCTCAGGCAATGCTTTTCGCGTGCG ACGTCACCAACAAGTCAGTCACAACGTCAACGGATGAGGGTAAGTCGCCG TATGAACTATGGTTTGGAAAATTCCCTACTGCCGATCATTTGCGACCGTT TGGAGCGGTGGGATACGCGCGACAGAGCGTGCGTGAACATAAGATGGCGC CAAAAGGAGAGAAATGCGTATTCATGGGAATTCCCCGAAACTTCCCCACT GGCACGGTAAGCGTGCTACTCGTAAGGTCAAGAAATATCGTGGAAAGGCA GGCCGTGCAGTGGATTGACGGGCCTAAAAAGACCGGGGGTGACGGCACCG GCAGTGACGACCGCGGCATGAAGTCGGCGGGAGATGAAATCATTGTTGAG AGAGGTACTCCGCAGCTCAATGTTCAGGAGCTAGGACAGGAACAACAGTT AACGCTGCACGAGCACGAGAGGCAGGAGGCGCTTTCGGAACTCGAAGGGG AGACGCAGGGGGCGTTATCGGAACATGAGGAGGATACGCAGGAGGCGCTT TCGGAAAACGAGCGAGAGCAGCAGCATGAGGAAGGGGAGCGGAACCTGCA TTGGGGTCGGCAAATTTGGAGGGACCGGCCTTACCCGCGCTGCGTAAGCT CACCATCGACGGCAATATCCCGCCCATACTGTCATCACGTACGAGGAGTC GAAGACCCCACACCGGTGTGGAGGGAGAAGCGTTGCACTGTTTCTTGCCG GCGATCGAGGCCGAAGAGGAAAACGGCGTGGAGGATGTGTTGGCATGCGA CGACGGGGGCCAGATGGCTATGCAAGCGACGCTAGATATACCGGAACCGA GAAATCGGCGGCAGGCGATGGAATCGCAGGAATGGGACGAATGGCGGAAG GCAGAGGAGACTGAGATGCTTGGAATGGTCGAGAACTGCGTTTATAAGCA GGTGGCTCGGCCGAAGGATAAGCTCGTGATTGGCACGAAAATGATATACA AGCGAAAAATCGGACAGGACGGCAAGGTCGAGAAGTACAAGTGTCGACTT GTCGCTCAAGGGTTCTGGCAGGTGGAAGGTGTGCACTACACGGAAAAGTA CTCGCCCACGCCATCAACCGCGTCAATCCGGATGCTTTTGGCGATGGCAG CGGCCAAGGACGGAGAGCTGCGCCATTTCGACGCAGAGCAGGCATTTTTG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig1072:50648..53997+

>mRNA_D-herbacea_F_contig1072.690.1 ID=mRNA_D-herbacea_F_contig1072.690.1|Name=mRNA_D-herbacea_F_contig1072.690.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=4218bp|location=Sequence derived from alignment at D-herbacea_F_contig1072:50648..53997+ (Desmarestia herbacea DmunF female)
AACGCAGTAAGTCAGGCACTGACCCATCAGATACAGCAGTTAGGAAACAG
CCTACCATCAACTACTGCAGCAAATCACAACGCAGTAAGTCAGGCACTGA
CCCATCAGATACAGCAGTTAGGAAACAGCCTACCATCAACTACTGCAGCA
AATCACGGCACCGTCACGGCAAATCGCGAAAAGGGGAAGAACAGAAGACT
CCACCACAAGTTCGATGGTAAATGCTTCAATTGCAGGAAGAAAGGTCACC
GCGCTGGAGACTGCAGGAGCGCGAAGAAAAAGAGGCACCGTCACGGCAAA
TCGCGAAAAGGGGAAGAACAGAAGACTCCACCACAAGTTCGATGGTAAAT
GCTTCAATTGCAGGAAGAAAGGTCACCGCGCTGGAGACTGCAGGAGCGCG
AAGAAAAAGAACTGTGAGGAGCGCGGAGCTGAAAAGGGCGCAATGCTGGC
AAAACTGACTGTGCCGGTGGTTCCTGAGGTGAGAACAGTGGCGGCAATGG
TGGGAGAAGCTCGTAGCGATAGGAAGGAAAAATGGGAATCAGATTCCGGC
GCCACATTCCACATGTCGCACACCCGCGCCGGAATGTCTGCTTATAAGAA
GGCGTCACCGGGGACGAACGTTGAGATCGCCGACGGTAACATTCTACCGG
TGGACGGGTTCGGGAGAATCGAGGTGGATCTGGACCAACCGGGGCGTACA
ACCAAGATGGTGAAGATGGACGATGTCGCGTATGTGCCGGGACTCTCCCG
AAATCTGCTGTCTACTGTCAAAGCAGTGGAGCAATGGGGGAAACCGTTAA
TCTACTATAGAAATAAAGCCGTTTTGGGGTTCCCGGGGAGGAATCGCTTG
TTTTCAAATTCTGCCCCCACTGTGAGGAGCGCGGAGCTGAAAAGGGCGCA
ATGCTGGCAAAACTGACTGTGCCGGTGGTTCCTGAGGTGAGAACAGTGGC
GGCAATGGTGGGAGAAGCTCGTAGCGATAGGAAGGAAAAATGGGAATCAG
ATTCCGGCGCCACATTCCACATGTCGCACACCCGCGCCGGAATGTCTGCT
TATAAGAAGGCGTCACCGGGGACGAACGTTGAGATCGCCGACGGTAACAT
TCTACCGGTGGACGGGTTCGGGAGAATCGAGGTGGATCTGGACCAACCGG
GGCGTACAACCAAGATGGTGAAGATGGACGATGTCGCGTATGTGCCGGGA
CTCTCCCGAAATCTGCTGTCTACTGTCAAAGCAGTGGAGCAATGGGGGAA
ACCGTTAATCTACTATAGAAATAAAGCCGTTTTGGGGTTCCCGGGGAGGA
ATCGCTTGTTTTCAAATTCTGCCCCCATCGCTTCGGGAGCGGCGCTGAGA
GCGGGCGCATCCCGTGACGTCATGGAGGTCCATCGCATGCTTGCGCACCC
GAGCGAGGACATTACAAGAAAGACGGCCGAGATTATGGGGATCGAGACGA
CGGGCCAGTGGGGGGCGTGTGAGACATGCTTCCAAGTTAAGGCGAAGCGA
CATGCCGTGCCAAAGAAGACAGAAGAACGGGCGAGCGTGAGAGGACAGCG
ATTCTTCGTCGACGTGGGCGGGCCGATGAAGCACTCGAGTCTCGGCGGGA
ACAGCTACGTCGTCATTTTCGTGGACGACTGCACCCGCTTCAAGGTTGTA
AAGTTCGTAAAGAAGAAGAGTGACACAACGGCCGCTCTCTTGTCTCTGGT
TGCAGATTATATTACACCGCAGAAGCTGTCGATCAAGTGCATACGGACGG
ATAATGGTGGCGAGTTTGAGGGAGAATTTCAGCGCGAATTGGACCGGCGC
AGCATCACGCACGAGCATACCCCGCCAGACACGCCGCAGTACAATGGGGT
GGCCGAACGTGCGCTTGGGCTTTTAAGAGAAAAGGCGATCATCCTGATGG
AGGAGTTAGACGACGTCATCAACGTGCCGCGAGAGAAGCTGTGGGCTCAG
GCAATGCTTTTCGCGTGCGACGTCACCAACAAGTCAGTCACAACGTCAAC
GGATGAGGGTAAGTCGCCGTATGAACTATGGTTTGGAAAATTCCCTACTG
CCGATCATTTGCGACCGTTTGGAGCGGTGGGATACGCGCGACAGAGCGTG
CGTGAACATAAGATGGCGCCAAAAGGAGAGAAATGCGTATTCATGGGAAT
TCCCCGAAACTTCCCCACTGGCACGGTAAGCGTGCTACTCGTAAGGTCAA
GAAATATCGTGGAAAGGCAGGCCGTGCAGTGGATTGACGGGCCTAAAAAG
ACCGGGGGTGACGGCACCGGCAGTGACGACCGCGGCATGAAGTCGGCGGG
AGATGAAATCATTGTTGAGAGAGGTACTCCGCAGCTCAATATCGCTTCGG
GAGCGGCGCTGAGAGCGGGCGCATCCCGTGACGTCATGGAGGTCCATCGC
ATGCTTGCGCACCCGAGCGAGGACATTACAAGAAAGACGGCCGAGATTAT
GGGGATCGAGACGACGGGCCAGTGGGGGGCGTGTGAGACATGCTTCCAAG
TTAAGGCGAAGCGACATGCCGTGCCAAAGAAGACAGAAGAACGGGCGAGC
GTGAGAGGACAGCGATTCTTCGTCGACGTGGGCGGGCCGATGAAGCACTC
GAGTCTCGGCGGGAACAGCTACGTCGTCATTTTCGTGGACGACTGCACCC
GCTTCAAGGTTGTAAAGTTCGTAAAGAAGAAGAGTGACACAACGGCCGCT
CTCTTGTCTCTGGTTGCAGATTATATTACACCGCAGAAGCTGTCGATCAA
GTGCATACGGACGGATAATGGTGGCGAGTTTGAGGGAGAATTTCAGCGCG
AATTGGACCGGCGCAGCATCACGCACGAGCATACCCCGCCAGACACGCCG
CAGTACAATGGGGTGGCCGAACGTGCGCTTGGGCTTTTAAGAGAAAAGGC
GATCATCCTGATGGAGGAGTTAGACGACGTCATCAACGTGCCGCGAGAGA
AGCTGTGGGCTCAGGCAATGCTTTTCGCGTGCGACGTCACCAACAAGTCA
GTCACAACGTCAACGGATGAGGGTAAGTCGCCGTATGAACTATGGTTTGG
AAAATTCCCTACTGCCGATCATTTGCGACCGTTTGGAGCGGTGGGATACG
CGCGACAGAGCGTGCGTGAACATAAGATGGCGCCAAAAGGAGAGAAATGC
GTATTCATGGGAATTCCCCGAAACTTCCCCACTGGCACGGTAAGCGTGCT
ACTCGTAAGGTCAAGAAATATCGTGGAAAGGCAGGCCGTGCAGTGGATTG
ACGGGCCTAAAAAGACCGGGGGTGACGGCACCGGCAGTGACGACCGCGGC
ATGAAGTCGGCGGGAGATGAAATCATTGTTGAGAGAGGTACTCCGCAGCT
CAATGAAAACGGCGTGGAGGATGTGTTGGCATGCGACGACGGGGGCCAGA
TGGCTATGCAAGCGACGCTAGATATACCGGAACCGAGAAATCGGCGGCAG
GCGATGGAATCGCAGGAATGGGACGAATGGCGGAAGGCAGAGGAGACTGA
GATGCTTGGAATGGTCGAGAACTGCGTTTATAAGCAGGTGGCTCGGCCGA
AGGATAAGCTCGTGATTGGCACGAAAATGATATACAAGCGAAAAATCGGA
CAGGACGGCAAGGTCGAGAAGTACAAGTGTCGACTTGTCGCTCAAGGGTT
CTGGCAGGTGGAAGGTGTGCACTACACGGAAAAGTACTCGCCCACGCCAT
CAACCGCGTCAATCCGGATGCTTTTGGCGATGGCAGCGGCCAAGGACGGA
GAGCTGCGCCATTTCGACGCAGAGCAGGCATTTTTGGAAAACGGCGTGGA
GGATGTGTTGGCATGCGACGACGGGGGCCAGATGGCTATGCAAGCGACGC
TAGATATACCGGAACCGAGAAATCGGCGGCAGGCGATGGAATCGCAGGAA
TGGGACGAATGGCGGAAGGCAGAGGAGACTGAGATGCTTGGAATGGTCGA
GAACTGCGTTTATAAGCAGGTGGCTCGGCCGAAGGATAAGCTCGTGATTG
GCACGAAAATGATATACAAGCGAAAAATCGGACAGGACGGCAAGGTCGAG
AAGTACAAGTGTCGACTTGTCGCTCAAGGGTTCTGGCAGGTGGAAGGTGT
GCACTACACGGAAAAGTACTCGCCCACGCCATCAACCGCGTCAATCCGGA
TGCTTTTGGCGATGGCAGCGGCCAAGGACGGAGAGCTGCGCCATTTCGAC
GCAGAGCAGGCATTTTTG
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