prot_D-herbacea_F_contig1072.690.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1072.690.1
Unique Nameprot_D-herbacea_F_contig1072.690.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length703
Homology
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 219 bits (558), Expect = 1.780e-56
Identity = 211/738 (28.59%), Postives = 315/738 (42.68%), Query Frame = 0
Query:   45 FDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGK--PLIYY--------RNKAVLG---FPGRNRLFSNSAPIASGAALRAGASRDVMEV---HRMLAHPSEDITRKTAEIMGIETTGQWGA-CETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYARQSVREH---KMAPKGEKCVFMGIPRNFPTGTVSVLL--------VRSRNIV--ERQAVQW-----------IDGPKKTGGDGTGSDDRGMKSAGDEII-VERGTPQLNENGV------------------------------------EDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 703
            F G C  C ++GH A DC     KN +     KG          V EV    A+   +  D    W  DSGAT HM+  +  +  Y +      V + D   +   G G   +  D     T+ + + +V Y+P L +NLLS    V+  GK   LI +        RN  +L      G+  +      +      R    +++      H  +   S+ I    AE M     G+  + CE+C   K  R   PK T  RAS   +    DV GPM   S G + Y V F+DD +++  V F+K K +        V+ Y+      +K +R+DNGGE+  + F+  L    I H+ T P  P+ NG AER    L E A  +M        +P+E  WA+A+  A    N+S T S +   +P+E  F + P   +L+ FG V Y    + +H   K+  K  KC+F+G    +P GT    L        +RSR+++  ER   ++           +  P K          +    A DE + VE+    + EN V                                    E++  C D        T DI EPRN  +A  ++   +W+KA ++E   ++EN  ++ V  P DK ++G++ ++K K   DG VEK+K RLVAQG+ Q EG+ Y E +SP     SIR LLA+A   D E+   D   AFL
Sbjct:  242 FHGLCHFCHERGHFARDCPKKNPKNKKFANVVKGEQQED-----VHEVTNQEALF-TSNDDSNCGWIIDSGATQHMTSEKNRLVNYVEFKQPCKVNLGDDRTIFAFGKGTYNLVADLGNGRTQNIALKEVLYLPDLKKNLLS----VQVMGKLGALIQFDGVQCKIERNSKLLATGELHGKLYMLKIIPGVEYINVAREAPDKNLWHCRFGHLGMNGISKLINENMAEGMNCSDHGKESSLCESCVMGKQHRTPFPKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVS-YVNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA----GMPKE-FWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVH--IPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNVEQNPQPILENNVPLQENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCADD------LTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFL 950          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A8J6L9W6_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L9W6_TENMO)

HSP 1 Score: 216 bits (549), Expect = 2.210e-55
Identity = 216/724 (29.83%), Postives = 329/724 (45.44%), Query Frame = 0
Query:   45 FDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKA-VLGFPGRNRLFSN-----------SAPIASGAALRAGAS-RDVMEV-HRMLAH-----PSEDITRKTAEIMGIETTGQWG------ACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGA-VGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGT---------GSDDR---------GMKSAG----------DEI----IV--ERGTPQLNENGVED----VLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 703
            F  +C+ C++ GH+A DC     KN + R + K A   + T   V E    +       S+++  W  DSGAT H+ +     S  K + PG  + +A+     +   G+     D  G + K + +     VP L  NLLS  K  E+ G  +I+ R+ A V+G  G  +L ++           +   ++G+   AG       EV HR L H      SE I++ T  ++G++             CE C Q K  R   PK+++ R S   +    DV GPM+  S+    Y + F+DDC+R+ VV+F++ KS+   A    +      Q   IK  +TDNGGE+  E F   L    IT   T P  P+ NG+AER    L + A  LM +      +P    WA+A+  A  + N+  + S   G++PYE+W GK P   H R FG  V    +     K   + ++ VF+G      +    V +   R +   + V++++G +K     T         G  D           M+SA           DEI    +V  ERG P+L   G       V    + G   ++A   I E    R AM S E DEW  A   E+  +++N  +K V RP D+ VIG++++ + K    G +E+ K RLVAQGF Q  GVH+ E ++P    +SIR+L ++AA  D  +R FD   A+L
Sbjct:  100 FKYRCYKCKEIGHKAADC-----KNKDFRASAKSA---EDTCLSVSECHLTS-------SNKRNTWCLDSGATSHLCNDERAFSEMK-SEPG-KINLANNGSTNITAQGKAMFTADVFGES-KNISLSKTLLVPDLRTNLLSVGKITEK-GCEVIFKRDNAFVVGNDGSVKLVADRIGELYYARERNKERSTGSVFAAGLPCTKTFEVWHRRLGHLNTRDMSEAISKGT--VLGLDVLKPMNFARDSIECEVCLQGKMVRTPFPKRSD-RTSELLELIHSDVCGPMRVESMSKARYFIEFIDDCSRWTVVRFLRSKSEAIEATKGFITMVENQQGKKIKTFQTDNGGEYTSEQFDNLLKGLGITRRFTIPHNPEQNGIAERKNRTLLDMARCLMLQS----GLP-PSFWAEAVNTANYIRNRCPSKSLG-GRTPYEVWTGKKPNVSHFREFGCRVFRLDRQPNRGKFDSRAKEGVFLGYSEE--SKGYRVWMPNERKVEITRDVKFLEGTEKKAEIFTEFVPDDLFKGETDEVESPRYVGIEMRSAEEVENPEEEVQDEIEEEPVVRRERGRPRLVRTGARGRPRKVCRFQEAGTAEIEAEAFISEI-PARIAMNSPEVDEWYDAMAVEIRSIIKNNTWKLVKRPDDREVIGSRIVLRNKYNAKGTLERRKARLVAQGFSQRPGVHFKETFAPVARLSSIRLLASIAAQYDMNIRQFDVTCAYL 792          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT)

HSP 1 Score: 214 bits (546), Expect = 2.970e-55
Identity = 201/712 (28.23%), Postives = 310/712 (43.54%), Query Frame = 0
Query:   44 KFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGFPGRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPSEDITRKTAEI----MGIETTGQ-----WGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPT----GTVSVLLVRSRNIVE-RQAVQWIDGPKKTGGDGTGSDDRGM---------KSAGDEIIVER------GTPQLNENGVEDVLA---------------------CDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 703
            KF G C  C++KGH A DC      +  +    KG   A        +  T    +  +  + +  W  DSGAT HM+  R  +S Y +     +V + D   +   G G   V      R  + V + +V Y+P L +NLLS V A+ +    + +  NK  +          N   +A G         ++++ H  +A    D  R         +G+    +       + E C + K  R   PK  + RAS   +    DV GPM   SLGG+ Y V F+DD +R+  V F+K KS+            +      IK + +DNGGE+   EF+  L +  I H+ + P  P  NGVAER    + E    ++       ++P E  WA+A+  +  V N+S T + ++  +PYE  F K P   +LR FG + Y      +  K+  K  K +FMG P           VS   +RSR+++   +     D    +  D    DD  +             DEI  +R      G  Q N+  V                           D+   +A   T DI EP N  +A   +   EW++A ++E   ++EN  ++ V+ PK K V+G+K ++K K  ++G V++YK RLVAQG+ Q EGV Y+E +SP     +IR LLA++ AK+ E+   D + AFL
Sbjct:  232 KFQGTCHYCKEKGHFARDCPKRINNSQRDGNQSKGKGSACCAQEKSEQNNTDEEALYTSDDENRCGWIIDSGATQHMTFERNRLSNYVEFKRPCSVNLGDNRSILAYGKGTYHVKAVVNDRI-QHVALQEVLYLPELDKNLLS-VHAMVKRDATVTFKENKCEIS--------RNLKILAVGEIQGKLYVLNIVKEHVNIAKQQPDTDRYLWHCRLGHLGMNNVNKLINENMVSGEACIKGKHHRCPYPKTADYRASEPFELVHSDVCGPMSVPSLGGSRYYVSFIDDYSRYIFVYFMKNKSEVLEKFKEFHTYAMNITGKPIKVLHSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAERMNRTVVETTRSMLSHA----HIPNE-FWAEAVNTSVYVRNRSPTKALND-ITPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGEHRMRTPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSENNSLIENETWELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFL 927          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A0V1KQY5_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A0V1KQY5_9BILA)

HSP 1 Score: 213 bits (542), Expect = 9.980e-55
Identity = 198/697 (28.41%), Postives = 305/697 (43.76%), Query Frame = 0
Query:   49 CFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWG-----------------KPLIYYRNKAVLGFPGRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPSEDITRKTAE---IMGIETTGQWGA-CETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGI-PRN-----FPTGTVSV----------LLVRSRNIVERQAVQWIDGPKKTGGDGTG---SDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 703
            C+NC+KKGH   +CRS +K N             K     +     VA    + R +  + W +D GA  H++  R   S  +   P   V I +  ++   G G I+V++   G+      ++DV YVP    + L ++ A    G                   L+ Y++  +     R RL  N++     A L  G +      H+ L H S +  +   +   + G+  T +    CE C      R    + TE R SV G+    DV GP  H S+GGN Y + F D+ + ++ V F+K K +    L + + +        ++ IRTD G EF   E    L  + I HE TPP TPQ NG+AER    L EKA  ++       N+PR  LWA+A+  A  + N+ +    +  K+PYE WFG+ PT +HLR FG   Y         K  PK  K +F+G  P N     F T    V           L +   +++ +   W+    K   D      +DD+  K         +   ++  N ++  L      + AM A  D   P    +A+E    ++W+++   E+  +  N  +     P D+  I  K ++K KI  DG+V KYK RLVA+G+ Q   + Y E ++P     S+R LLA+AA +D E+  FD + AFL
Sbjct:   31 CWNCKKKGHIRSECRSQRKLNSST---------LKDRTKSLNRTGFVARSWLDVRQEPNDGWLADFGAFKHITRNRHWFSTLEFIEP-QGVRIGNDKMIYAVGIGTIDVEVFN-GKQWIASVLNDVLYVPEFGSSCLFSLGAAAARGYRIMMDNFNIRFMMNNRTELVGYKDGDLYTLLIR-RLSDNTS---MSAMLTEGETHSFELWHQRLGHISVEKIKTMMQRKLVDGLRATAEEKFFCEGCVFGSMTRKPHKEVTERRQSVPGEIIHADVCGPFIHPSVGGNRYFICFKDESSGYRKVYFMKTKDEVLRCLKTALTEIKQETGRDVQRIRTDRGTEFANRELDNFLTEKKIVHEKTPPYTPQCNGMAERENRTLAEKARAMLHTR----NLPR-CLWAEAVHTAAYLLNR-IPNRKEITKTPYEEWFGRRPTVEHLRIFGCDAYVHIPDQHRRKFDPKARKVIFVGYGPSNKMFRVFDTNKHRVDKVTDVQFNESLQKRLVLIDGEEDSWMQTADKDEDDFLEYDITDDKTEKRGPGRPPGSKNKIKVISNPLKMELRSKSTERTAMLAAAD---PLTEEEALEGANAEKWKESMLEEISALHMNDTWILTDLPADRKTIQCKWVFKSKINSDGEVSKYKARLVAKGYSQRAEIDYFETFAPVVRYESVRTLLAIAADEDLEILQFDVKTAFL 703          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A438CI20_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CI20_VITVI)

HSP 1 Score: 213 bits (541), Expect = 2.670e-54
Identity = 187/684 (27.34%), Postives = 315/684 (46.05%), Query Frame = 0
Query:   44 KFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVP-EVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVL---------GFPGRNRLFSNSAPIASGAALRAGASRDVMEV----HRMLAHPSEDITRKTAEIMGIET--TGQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLRE--KAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVG-YARQSVREHKMAPKGEKCVFMGIPRN-----FPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 703
            KF GKCFNC K+GH++ DCR  KK   +E       ++  +T  V   ++  V + V    S+ KE W  D+GAT H+   +   S ++    G  V + +     + G G++ + +     + K + + +V YVP + +NL+S    +   G  L++  NK VL         G+        N   I      +A  S  ++E     H  L H + D  R+   +  I T        CETC + K  R +   ++ ER +        D+       + GGN Y + FVDD T++  V  +K K +     +    +        IK +R+D GGE+E  F     +  I HE T P +PQ NGVAER    L+E   A+++   L        + +W +A+L A  + NK      +  K+PYELW G+ P+  +LR +G +   A    ++ K+ PK   C+F+G   N     F     ++  +  + I+E +   + +           S  + M  + D+       P+ ++    +     D     ++      EP+  ++A+ S E   W++A ++E+  +++N  ++ V  P     + +K I+KRK+  DG ++KYK RLV +G+ Q+EG+ Y + YSP     SIRM+LA+AA ++ E+   D + AFL
Sbjct:  275 KFQGKCFNCGKQGHKSVDCRLPKKNKPKEAN-----VIDDITKNVYDIDLTAVVSEVNLVGSNPKEWW-IDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMT----SGKELTLTNVLYVPEIRKNLVSG-SLLNNHGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLGHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSF--QSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLP-------QNMWGEAILTANYLLNKVPKKKAE--KTPYELWKGRKPSYTYLRMWGCLAKVAIPPPKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKKTIMESRNASFFEDVFPCKSKEEPSSSKRMFESQDQNEEVEVEPRRSKRVRTEKSFGPDFLTFMLEG-----EPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQIEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFL 931          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID)

HSP 1 Score: 212 bits (540), Expect = 3.500e-54
Identity = 207/702 (29.49%), Postives = 310/702 (44.16%), Query Frame = 0
Query:   48 KCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGFPGRN--------RLFSNSAPIASGAALRAGASRDVMEV-HRMLAHPSED---ITRKTAEIMGI-----ETTGQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLV----------ADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKF-PTADHLRPFGAVGYAR--QSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQA-VQWIDG--------PKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 703
            KC  C+K GH A +C   KKKN  +R  E  A LAK       +  +  A+    R +  E W  DSGAT HM+  +  +  Y        V +AD +IL   G G + + +       K+V + DV +VP +   L S + AV + G  + +  +   +   G+         +L+  +  I S      G + D +++ H+   H   D   +  K   + G+     ET  +   CE C   K  R   PKK+        +    DV GPM   S+GG+ Y V F+DD +R+  V  +K KS+  A     V             +  +  +I+ +R+DNGGE+   EF      R I+ E T P +PQ NGVAER    L E A  ++      I     K WA+A+  AC V N+S T    E  +PYE+W  K  P   +L+ FG   Y     + R+ K   K   C+F+G P N      +   T  +   R    VE+   ++  DG        P+ T  D    D+         +   R   +LN    E     D     A  A +D  EP    +A+ S   + W+ A + E   ++EN  +K V  P DK ++G+K ++K K G DGK+++ K RLVAQG+ Q  G+ Y + ++P     SIR +LA+    D EL   D + AFL
Sbjct:  212 KCHYCKKTGHFAREC--YKKKNDLKR-KEGQAKLAKDEAVSDVQANSELALKSSNRIE-DENWWIDSGATQHMTPQKESIENYVAFKEPITVRLADESILYSYGKGDVHLTVKDTTEKVKIV-LKDVLFVPKIQNKLFS-LPAVTEKGYIVDFQGDSCGISIEGKRYSVGKKHGKLYKLNT-INSDQTCYIGNAMDEIDLWHQRYGHLGYDNLKLLNKKEMVNGLNFELKETVNR--NCEGCAMGKQHRQPFPKKSTNTTKGLLELIHSDVCGPMDVPSVGGSRYFVTFIDDYSRYTTVYMMKHKSEVLAKFTEFVNLVENRTGLKVKRLNVENQAIQRLRSDNGGEYTSTEFTSFCTDRGISREPTIPYSPQQNGVAERMNRTLLETARSMLHHAQKPI-----KFWAEAISTACYVRNRSPTAFLKE-TTPYEIWHRKKKPDVSNLKVFGCKSYVHVPDTKRKGKFDKKSISCIFVGYPSNENGFKFYDPQTRKMFRSRDVTFVEKDFDIEKFDGTNSNFEFFPESTEPDEP-EDNXXXXXNARPVRTRRPPERLNVLTGEWWNLID----AASIAIVDEEEPTTIEEALSSPNAELWKDAIQNEYDSLIENETWKLVEMPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFL 893          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: J9LCG1_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9LCG1_ACYPI)

HSP 1 Score: 212 bits (540), Expect = 3.910e-54
Identity = 210/747 (28.11%), Postives = 335/747 (44.85%), Query Frame = 0
Query:    9 HQIQQLGNSLPSTTAANHGTVTANREK------GKNRRLHHKFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSD----RKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPL------IYYRNKAVLGFPGR-NRLFS---NSAPIASG-AALRAGASRDVMEVHRMLAHPSEDITRKTAEIMGIETTGQWGA--CETCFQVKAKRHAVPKKTEERASVR-GQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKA--IILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAM------------QATLDIP------------EPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 703
            H +Q++      +   ++GT   N+EK       +N+R + K  GKC +C+K GH   +CR   K+  E   +E                 +  A+VG    D      EKW  DSGA+ HM+  +   + Y+       V I DG  +   G G I V   + G       + +V +VP L  NL S    +++  K +      I+ +N  ++G   R N++FS    + P+     A  A  +  +++ H +L+H +    R   + M I+ T       CE C  V  K+H  P       + + GQ    DV GPM+ +SLGG  Y VIF DD + +  V F+ +KS+        +        +S+  +R+D G E++  E +  LD+  I HE + P TPQ NG AER++  + E A  ++  + L        + LWA+A+  A    N++  T   EGK+PYELWF K P  ++L+ FG+  YA     +  K   KG K +F+G      T    +        + R  +  ++    +    TG++ +      +E +         E   +D    DD  QM +            +  L+ P            +P   ++AM     D W+ A + EML + +N  ++ V  P +K  I    IYK K   +G+V++YK RLV +G  QV G+ + E +SP     SIR++LA+AAA+   LR FD + AFL
Sbjct:  207 HDVQRVTAGSAFSAKKSYGT---NKEKHTKIGNSENQRNNDKKPGKCNHCKKPGHWKRECRIFLKEQKERNKSESN---------------SGNALVGVQSKDIEISESEKWYVDSGASDHMTSRKEWFTNYELFETQLPVHIGDGKYIMAIGKGNINVQA-KIGDKWVDSHLSNVLHVPDLKVNLFSCGACLDKGIKMVTDSDGCIFKKNNRIVGIGVRENKMFSMVLRTGPLQQADQANIAVKNLTLLQWHEILSHQNVQHVRNYLKHMRIQFTETKNKFFCEAC--VYGKQHREPFTLSNTKTTKPGQLIHSDVCGPMEVNSLGGKRYFVIFKDDYSNYTYVYFMSQKSEVKNKFELFLNTVKNQLNISVITLRSDCGLEYKNTEVKALLDKFGIKHETSVPYTPQQNGKAERSMRTIVEAARTMVYSKNLS-------KTLWAEAVNTAVYTINRTGNTG-QEGKTPYELWFNKTPDINNLKIFGSEVYAHIPKEKRRKWDQKGRKGIFVGYSEE--TKGYRICFDGKEVSLSRDVIFKVESVNPS----TGTEVKIRSEEEEEXVNLXXXXXXXEVNSDDEEKLDDDDQMPVAVEDQQQMILRDRGKLNKPIRYRDAFFSACNDPLTYKEAMTGNNIDNWKAAMDDEMLSLQKNETWQLVDLPINKNPINNGWIYKTKYKTNGEVDRYKARLVVKGCAQVHGIDFQETFSPVVKYDSIRVILAIAAARRLMLRQFDIKTAFL 918          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A445IW95_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445IW95_GLYSO)

HSP 1 Score: 212 bits (540), Expect = 4.860e-54
Identity = 202/699 (28.90%), Postives = 315/699 (45.06%), Query Frame = 0
Query:   38 NRRLHHKFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQW------GKPL-IYYRN-KAVLGFP-GRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPS-EDITRKTAE--IMGI-ETTGQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAII-LMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIV--------ERQAVQWIDGPKKTGGDGTGSDDRGMKSAGD------EIIVERGTPQ-LNENGVEDVLACDDG--GQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 703
            NR+   K   +CFNC+K GH A +C S      E +G +  A LA+       +V  +     E  SD    W  D+G + HM+  R       + S  + V+ AD  IL  +G G++ +     G++     + DV +VPG+  NLLS  + +E+        K L ++ RN K +L  P  +NR F     +          + +    H    H +  D+ +  +   ++G+ +       C+ C Q K  R    +    RA  + +  + DV GPM+  SLGGN Y + F+D+ TR   V  +++KSD                   IK +RTD GGE+   EFQ   D+  I HE TPP TPQ+NG AER     + + I+ ++  +    ++P+  LW +A+  A  + N S +    EG +P E W G  P   H R FG++ +         K+  KGE+ + +G      TG   +   +S+ I+        E ++  W    +  G       +    S G+      E+  +R  P+     G E +   D    G +   A     EP N   AM  Q W E   A   E+  + +N V++ V++PK K  I  K IYK K   +GKV KYK RLVA+GF Q  G+ Y E ++P     +IR ++A+A+ K+  +   D + AFL
Sbjct:  965 NRKKFDKRSIQCFNCQKFGHFADECYSKPNNKREPKGDD--AKLAQEEDXXTEQVLLMVTTQIEGASDNC--WYLDTGCSTHMTGRREWFLNLDQ-SVKSQVKFADDRILTAEGIGKVLIKTKDGGQSC----ITDVLFVPGMKSNLLSLGQLLEKGFMTKLENKMLRVFDRNHKLILKSPLSKNRTFKIEIDVIEQKCFTTTVNSEEWLWHYRFGHLNFRDLIKLNSREMVLGLPQIKPPSEVCDGCLQCKQSRSTFKQNVPIRAKEKLEVIYSDVCGPMQTESLGGNKYFISFIDELTRKVWVYLIRRKSDVFEVFEKFKNMAEKQSGSLIKILRTDGGGEYVSTEFQEFCDQEGIIHEVTPPYTPQHNGAAER-----KNRTIMNMVRSMLKGKSLPKY-LWGEAVSTAVFILNMSPSKRL-EGITPEEAWSGAKPNVSHFRIFGSLCFRHIPDQLRRKLDDKGEQMILLGY---HSTGGYKLFDPKSKKIIISRDVVFDESRSWNWEQNTEMKGPSIMIRSEEEETSEGNGNTTQREVRRQRNAPKPARFQGFEMLSDADVSADGNLVHFALFSEAEPINFEDAMTDQRWVE---AMTEELKSIEKNQVWELVSQPKSKKPIDVKWIYKIKTNPEGKVVKYKARLVAKGFLQKAGIDYREVFAPVARIETIRTVVAIASLKNWTMHQLDVKCAFL 1641          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A0V1MB43_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V1MB43_9BILA)

HSP 1 Score: 211 bits (538), Expect = 6.360e-54
Identity = 206/720 (28.61%), Postives = 320/720 (44.44%), Query Frame = 0
Query:   27 GTVTANREKGKNRRLHHKFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGFPGRNR--------------LFSNSAPIASGAALRAGASRDVMEV-HRMLAHPSEDITRKTAE---IMGIETTGQWGA-CETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGI-PRN-----FPTG---TVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGM--KSAGDEIIVERGT--PQLNENGVEDVLACDDGGQMAMQ---------ATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 703
            G  T ++E  KN +   K + +C+NC+KKGH   +CRS +K N             K     +     VA    + R +  + W +DSGA  H++  R   S  +   P   V I +  ++   G G I+V++   G+      ++DV YVP    + L ++ A    G  +I   +   + F   NR              L   S    S +A+         E+ H+ L H S +  +   +   + G+  T +    CE C      R    + TE R SV G+    DV GP  H S+GGN Y + F D+ + ++ V F+K K +    L   + +        ++ IRTD G EF   EF   L  + I HE +PP TPQ NG+AER    L EKA  ++       N+P+  LWA+A+  A  + N+ +    +  K+PYE WFGK PT +HLR FG   Y         K   K  K +F+G  P N     F T       V  V+    ++++ V  IDG ++        D+  +  +   D+   +RG   P  + N ++ +     G  + M+         A L   +P    +A+     ++WR+A   E+  +  N  +     P D+  I  K I+K K    G+V KYK RLVA+G+ Q   + Y+E ++P     S+R LLA+AA +D E+  FD + AFL
Sbjct:  203 GKRTTSKETNKNSK---KRNIECWNCKKKGHIRSECRSQRKLNSST---------LKDRTKSLNRTGFVARSWLDIRQEPNDGWLADSGAFKHITRNRHWFSTLENIEP-QGVRIGNDKMIYAVGIGTIDVEVFN-GKQWIASVLNDVLYVPEFGSSCLFSLGAAAARGYKIIM--DNFNIRFMMNNRTELVGYKDGDLYTLLIRRSLDNTSMSAMLTEGETHSFELWHQRLGHISVEKIKTMVQRNLVDGLRATAKGKFFCEGCVLGSMTRKPHKEVTERRQSVPGEILHADVCGPFIHPSVGGNCYFICFKDESSGYRKVYFMKTKFEVLRCLKIAMTEIKQETGRDMQRIRTDEGTEFVNREFDNFLTEKKIVHEKSPPYTPQCNGMAERENRTLVEKARSMLHAR----NLPKG-LWAEAVHTAAYLLNR-IPNRKETTKTPYEKWFGKRPTVEHLRIFGCDAYVHIPDQHRKKFDRKARKVIFVGYGPSNKMFRVFDTNKHRVDEVTDVKFNESLQKRLV-LIDGEEEIWMQTADKDEDNIHKEDIPDDKTEKRGPGRPPGSRNKIKVI-----GNPLKMELRSKSTERTAMLAAADPLTEEEALRGANAEKWREAMLEEITALHMNNTWILTDLPSDRKTIQCKWIFKSKTNSHGEVSKYKARLVAKGYSQRAEIDYSETFAPVVRYESVRTLLAIAADEDLEILQFDVKTAFL 894          
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT)

HSP 1 Score: 211 bits (538), Expect = 6.520e-54
Identity = 207/722 (28.67%), Postives = 316/722 (43.77%), Query Frame = 0
Query:   45 FDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFG--RIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYY-------RNKAVLGFPGRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPSEDITRKTAE---IMGIETTGQW---GACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYARQSVREHK-MAPKGEKCVFMGIPRNFPTGTVSVLL--------VRSRNIV--ERQAVQWIDGPK-KTGGD-----------------------GTGSDDRGMKSAGDEIIVERGTPQLNENGVEDV------------LACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 703
            F GKC NC+++GH A DC    K+N +    ++    A+       +  T    +  +       W  DSGAT HM+  ++ +S Y +      V + D   +   G G  RI  DL   G   + + + DV Y+P L +NLLS V+A+ + G  + +        RN  +L              +    A  A    ++   H    H   D   K  +   + G++          CE C   K  R   P    +RA+   +    DV GPM  +S+GG+ Y V F+DD TR+  V F+K K +  A     V         S+K +RTDNGGE+   EF+  L  + I H+ T P  P  NGV+ER    L E    +M      +     + WA+A+  A  + N+S TTS  E  +PYE  F + P   +LR FG   +A    ++ K    K  K VF+G    +P GT    L        +RSR+IV  E +   + DG   KT  D                       G  ++    ++  +E+ V+       EN + +                DD   +A   T DI EP + ++A       EW++A ++E   +++N  ++ V  PK K ++G++ ++K K   DG VE++K RLVAQG+ Q +G+ Y E +SP     SIR LLA+A   D E+   D + AFL
Sbjct:  227 FKGKCHNCQERGHYARDC---PKRNADSANRKESKGSARCAEKDDGDFITEDEALFTSDLLHNSGWIIDSGATQHMTFDKSNLSDYVEFKQPCIVNLGDNRSILAYGKGTYRIVADL---GDHVQNISLRDVLYLPDLEKNLLS-VRAMVKLGANVRFEGEGCEITRNSKLLAVGKMQGKLYMLKIVTVDHANIAKEDLNLKLWHYRYGHLGMDNVNKLMKGEMVQGMDCVMDGESDSVCEGCIMGKQHRTKYPSGVAKRATEPFELVHSDVCGPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTPV-----EFWAEAINTAVYLRNRSPTTSLKE-ITPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIG----YPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCSGKTCTDFYIPVDDVIPQVEIQDVPAVVIEGDHNELVDEENEREEVHVQPVGATYEENFMRETGNLGDKRQRRAPSRFDDKCYVADNLTADINEPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFL 931          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9IUY0_PARCT1.780e-5628.59Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8J6L9W6_TENMO2.210e-5529.83Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A7D9D6Q5_PARCT2.970e-5528.23Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A0V1KQY5_9BILA9.980e-5528.41Retrovirus-related Pol polyprotein from transposon... [more]
A0A438CI20_VITVI2.670e-5427.34Retrovirus-related Pol polyprotein from transposon... [more]
A0A7M6DPI8_9CNID3.500e-5429.49Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
J9LCG1_ACYPI3.910e-5428.11Uncharacterized protein n=1 Tax=Acyrthosiphon pisu... [more]
A0A445IW95_GLYSO4.860e-5428.90Retrovirus-related Pol polyprotein from transposon... [more]
A0A0V1MB43_9BILA6.360e-5428.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A6S7HNY1_PARCT6.520e-5428.67Retrovirus-related Pol poly from transposon TNT 1-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 48..64
e-value: 0.0076
score: 24.3
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 48..64
score: 9.455
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 617..703
e-value: 1.0E-17
score: 64.6
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 294..406
e-value: 3.2E-15
score: 56.4
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 279..460
score: 20.492
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 283..479
e-value: 7.8E-25
score: 89.2
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 357..697
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 357..697
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 295..468

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1072contigD-herbacea_F_contig1072:50648..53997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1072.690.1mRNA_D-herbacea_F_contig1072.690.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1072 50648..53997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1072.690.1 ID=prot_D-herbacea_F_contig1072.690.1|Name=mRNA_D-herbacea_F_contig1072.690.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=703bp
NAVSQALTHQIQQLGNSLPSTTAANHGTVTANREKGKNRRLHHKFDGKCF
NCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVG
EARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVD
GFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIY
YRNKAVLGFPGRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPSEDI
TRKTAEIMGIETTGQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVD
VGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYI
TPQKLSIKCIRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERA
LGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGK
SPYELWFGKFPTADHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNF
PTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGMKSAGDEII
VERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDE
WRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYK
CRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQ
AFL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR039537Retrotran_Ty1/copia-like
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR013103RVT_2
IPR001878Znf_CCHC