mRNA_D-herbacea_F_contig106.619.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig106.619.1 vs. uniprot
Match: D8LN22_ECTSI (PFfh, plastid Ffh subunit of the signal recognition particle n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN22_ECTSI) HSP 1 Score: 627 bits (1616), Expect = 3.810e-219 Identity = 353/486 (72.63%), Postives = 391/486 (80.45%), Query Frame = 2
Query: 191 MPSSRVSAPRG---SAVTRRRAPVNMMFDTLAENMSAVANLFSGKKTISESSVEGALKEVKRALLDADVNLKVTNQLVAAVKDKAVGMTLVDGVSPEQQFVKVMNDELVEIMGSKQAPLARRTDGNPTVILLAGLQGTGKTTAAAKLAKYLKADEEEPKKVLLVAGDVYRPAAIDQLISLAKRIEVEVFSMGQGVNPVDITMAGLAHAKENGFDTVIVDTAGRQVVDDSLMAELKNIQVASQADEVLLVVDAMTGQEAATLASVFNEKIGITGTVLTKMDGDTRGGAALSVQGVSQRPIKFVGVGEKLDDLEPFYPERMASRILGMGDVVTLVEKAQKEMSEEEASKLAKKMVNAEFDFNDFLKQSKMMKGMGDMGSVAKMIPGMAGKISPRQLSGVEERVKRADKLIAVMTAEERRTPNLLLSDPTSQQRLRRIAQEAGVKISEASAFMKEFQQMRQYMSNMGKQMQGSDPNAAPGSS-SPFAGM 1636
+P SR S+ RG +P+ MMFDTLAENM+ VANLF+G+KTI+ESSVEGAL EVKRALLDAD+NL VTN LV AVK KAVGM LVDGV+ +QQFV VMNDELVEIMG++QAPLARRTDG PTVILLAGLQGTGKTTAAAKLAKYL+ EEEPKKVLLVAGDVYRPAAIDQLISL KRI+VEVFSMGQGV+PV+IT AGL A E FDTVIVDTAGRQVVDD+LM ELK+IQVAS+ADEVLLVVDAMTGQEAATLASVFNEKIGITG VLTKMDGDTRGGAALSVQGVSQ+PIKFVG+GEK MSEEEA+KLAKKM+NAEFDFNDFLKQ+KMMKGMG +G VA MIPGMAGKI+P+QL+ EE V+RA+ LI MT EERRTP LL+ DPTSQ R RRIA++AGVK+S SAF+KEFQ M+ MS MGKQM DPNA PG SPF G+
Sbjct: 69 LPVSRSSSRRGRRGGCAGGASSPLGMMFDTLAENMAGVANLFTGQKTITESSVEGALNEVKRALLDADLNLMVTNTLVDAVKSKAVGMKLVDGVTAKQQFVNVMNDELVEIMGAEQAPLARRTDGKPTVILLAGLQGTGKTTAAAKLAKYLQ-QEEEPKKVLLVAGDVYRPAAIDQLISLGKRIDVEVFSMGQGVDPVEITKAGLERAVEGEFDTVIVDTAGRQVVDDTLMTELKDIQVASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGIGEK--------------------------------MSEEEAAKLAKKMINAEFDFNDFLKQAKMMKGMGSLGGVANMIPGMAGKITPQQLNQAEEGVQRAEGLIKFMTPEERRTPKLLILDPTSQARCRRIARDAGVKLSAVSAFLKEFQAMQSNMSRMGKQMADGDPNAGPGGQPSPFQGL 521
BLAST of mRNA_D-herbacea_F_contig106.619.1 vs. uniprot
Match: A0A835YMH5_9STRA (SRP54-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH5_9STRA) HSP 1 Score: 528 bits (1360), Expect = 5.230e-180 Identity = 291/492 (59.15%), Postives = 372/492 (75.61%), Query Frame = 2
Query: 224 SAVTRRRAPV--NMMFDTLAENMSAVANLFSGKKTISESSVEGALKEVKRALLDADVNLKVTNQLVAAVKDKAVGMTLVDGVSPEQQFVKVMNDELVEIMGSKQAPLARRT-DGNPTVILLAGLQGTGKTTAAAKLAKYLK--------ADEEEPK-----------------KVLLVAGDVYRPAAIDQLISLAKRIEVEVFSMGQGVNPVDITMAGLAHAKENGFDTVIVDTAGRQVVDDSLMAELKNIQVASQADEVLLVVDAMTGQEAATLASVFNEKIGITGTVLTKMDGDTRGGAALSVQGVSQRPIKFVGVGEKLDDLEPFYPERMASRILGMGDVVTLVEKAQKEMSEEEASKLAKKMVNAEFDFNDFLKQSKMMKGMGDMGSVAKMIPGMAGKISPRQLSGVEERVKRADKLIAVMTAEERRTPNLLLSDPTSQQRLRRIAQEAGVKISEASAFMKEFQQMRQYMSNMGKQMQ-GSDPNAAPG 1612
S +RRA V MMFD L E M+ + + GKK I+ +SVE AL EVKRALLDADVNLKVTN L+ +V+++AVG L++GV+P+QQFVK+M DELV++MGS+QAPLAR T +G P VILLAGLQG GKTTAAAKLAK+ + A+E +P+ KVLLVAGDVYRPAAI+QL L +RI EVF+ G+ V+PVDI G+ +A++ GFD VIVDTAGRQV+D+ LM EL ++ A + DEVLLVVDAMTGQEAATL + FNE++GITG +LTK+DGD+RGG+ALSVQGVS RPIKFVGVGE++DDLEPFYP+RMASRILGMGD+V+ VEKAQK++SE E ++L++KM++A FDFNDFL+QSK+++ MG M +VAKMIPGMAGK+S +Q+ E+R +RAD I++M EER P+LL+ D + QR RRIA+ A V+ + +AF+ +FQ MR MS M K+M G D APG
Sbjct: 46 STTQQRRAAVVPRMMFDQLTEKMAGIGEMLQGKKKITAASVERALGEVKRALLDADVNLKVTNGLIESVRNQAVGKLLIEGVTPDQQFVKIMYDELVKVMGSQQAPLARSTKEGEPVVILLAGLQGAGKTTAAAKLAKFCQERGAGVAPAEEPQPEMKEGEVWTPPQREGPPGKVLLVAGDVYRPAAIEQLQRLGERIGAEVFAPGRDVDPVDIARGGVQYARDGGFDAVIVDTAGRQVIDEKLMDELVKVKGACEPDEVLLVVDAMTGQEAATLTAAFNERVGITGAILTKLDGDSRGGSALSVQGVSGRPIKFVGVGERIDDLEPFYPDRMASRILGMGDIVSFVEKAQKQVSEAEMAQLSQKMMDATFDFNDFLEQSKVVRNMGSMANVAKMIPGMAGKLSQQQMDDAEDRAERADLFISLMLPEERTNPDLLIRDAAALQRQRRIAKAAQVRPQDVAAFISDFQTMRTMMSRMSKRMAPGGDMGGAPG 537
BLAST of mRNA_D-herbacea_F_contig106.619.1 vs. uniprot
Match: A0A6V3B529_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3B529_HETAK) HSP 1 Score: 503 bits (1296), Expect = 1.190e-170 Identity = 286/488 (58.61%), Postives = 352/488 (72.13%), Query Frame = 2
Query: 146 SALGNKQFCGLQQQRMPSSRV---SAPRGSAVTRRRAPVNMMFDTLAENMSAVANLFSGKKTISESSVEGALKEVKRALLDADVNLKVTNQLVAAVKDKAVGMTLVDGVSPEQQFVKVMNDELVEIMGSKQAPLAR--RTDG----NPTVILLAGLQGTGKTTAAAKLAKYLKADEEEPKKVLLVAGDVYRPAAIDQLISLAKRIEVEVFSMGQGVNPVDITMAGLAHAKENGFDTVIVDTAGRQVVDDSLMAELKNIQVASQADEVLLVVDAMTGQEAATLASVFNEKIGITGTVLTKMDGDTRGGAALSVQGVSQRPIKFVGVGEKLDDLEPFYPERMASRILGMGDVVTLVEKAQKEMSEEEASKLAKKMVNAEFDFNDFLKQSKMMKGMGDMGSVAKMIPGMAGKISPRQLSGVEERVKRADKLIAVMTAEERRTPNLLLSDPTSQQRLRRIAQEAGVKISEASAFMKEFQQMRQYMSNMGKQM 1582
SA+G F R P S V +A RG V V F+ L E M+ VA + +GK ++E +++ AL +VKRA+LDADVNLKVTN L+ AVK KA+GM + GV+PEQQFVKVM DELV I+G A LAR R D PTVILLAGLQG GKTTAA KLA Y K E + ++ LL A DVYRPAAIDQL +L RI VEVFS G +PV+I A +AHAK G+DTVIVDTAGRQV+D++LMAELKNI+ A DEVLLV+DAMTGQEAATL + F+E + +TG VLTK+DGD+RGGAALSV GVS +PIKF+GVGE+LD LEPFYP+RMASRILGMGDV++LVEKAQ+++SE+EA + KM++ FDF+DFLKQS+MM MG M +V KM+PGMAGK+S ++ E+R+ RA LI M AEER P+LL+ D + RLRRI+ +AG EA F+ EFQQM+ MS M KQM
Sbjct: 29 SAVGRSYFALRGPSRAPVSCVRKSNAARGGRVV-----VKAFFEQLTEGMAGVAEMMTGKSRMTEKNIDAALTDVKRAMLDADVNLKVTNDLIKAVKKKALGMEVTKGVTPEQQFVKVMGDELVRILGGAVAELARGDRVDALGQPEPTVILLAGLQGAGKTTAAGKLALYCKG-EAQGRRPLLCAADVYRPAAIDQLKTLGGRIGVEVFSQGTDADPVEIARAAVAHAKAQGYDTVIVDTAGRQVIDENLMAELKNIKTAVNPDEVLLVLDAMTGQEAATLTARFDEAVALTGAVLTKLDGDSRGGAALSVYGVSGKPIKFIGVGEQLDKLEPFYPDRMASRILGMGDVISLVEKAQEQVSEDEAMAMTMKMMDNTFDFDDFLKQSEMMNKMGSMANVVKMLPGMAGKVSQAKMDQAEDRMDRARALIKAMNAEERGNPDLLIRDREAWTRLRRISADAGYSFDEAREFILEFQQMKTIMSRMSKQM 510
BLAST of mRNA_D-herbacea_F_contig106.619.1 vs. uniprot
Match: A0A7R9U2M9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2M9_9STRA) HSP 1 Score: 499 bits (1286), Expect = 7.960e-169 Identity = 273/485 (56.29%), Postives = 352/485 (72.58%), Query Frame = 2
Query: 188 RMPSSRVSAPRGSAVTRRRAPVNMMFDTLAENMSAVANLFSGKKTISESSVEGALKEVKRALLDADVNLKVTNQLVAAVKDKAVGMTLVDGVSPEQQFVKVMNDELVEIMGSKQAPLARR----TDGN-------PTVILLAGLQGTGKTTAAAKLAKYLKADEEEPKKVLLVAGDVYRPAAIDQLISLAKRIEVEVFSMGQGVNPVDITMAGLAHAKENGFDTVIVDTAGRQVVDDSLMAELKNIQVASQADEVLLVVDAMTGQEAATLASVFNEKIGITGTVLTKMDGDTRGGAALSVQGVSQRPIKFVGVGEKLDDLEPFYPERMASRILGMGDVVTLVEKAQKEMSEEEASKLAKKMVNAEFDFNDFLKQSKMMKGMGDMGSVAKMIPGMAGKISPRQLSGVEERVKRADKLIAVMTAEERRTPNLLLSDPTSQQRLRRIAQEAGVKISEASAFMKEFQQMRQYMSNMGKQMQGSDPNAAP 1609
R+PS R +AP R P MMFD ++E MS+ L GKKT++E++V AL +VKRALLDADVNLKV N L+ VK+ +G +V+G +P+Q F+K MNDEL+ +MG++ APLA R DG PTV+LLAGLQG GKTTA KLA+Y K DE+ P+ VLL A DVYRPAAI QL L +++ V+V++ G +PVDI AK+ G+DT+IVDTAGRQV+D+ LMAEL+ I+ A + DE LLVVDAMTGQEAATL + F+ ++ ITG +LTK+DGDTRGGAALSV +S RPIKF GVGEK+D LEPFYP+RMASRILGMGDVVTLVEK +KE+SE++A ++ KM++ FDF+DFL+Q+KM+ MG M V KM+PGMAG++S QL E+R+ RA+ LI MT +ER+TP+LL+ D +++ RL RIA +G + EAS F+ EFQQMR MS+MGK M G NA P
Sbjct: 53 RLPSLRRAAPL-------RTPPKMMFDRISEAMSSAGQLLRGKKTLTENNVNAALADVKRALLDADVNLKVANDLIKNVKEDVLGKEVVEGATPDQMFIKCMNDELISLMGAEAAPLADRRKRDADGKVLAAGDRPTVVLLAGLQGAGKTTACGKLARYCKEDEKAPRNVLLAACDVYRPAAIKQLEILGEQVGVDVYTEGTEASPVDIASNAFQKAKQEGYDTLIVDTAGRQVIDEDLMAELRGIKDALEPDETLLVVDAMTGQEAATLTARFDSEVSITGAILTKLDGDTRGGAALSVNAISGRPIKFAGVGEKMDALEPFYPDRMASRILGMGDVVTLVEKLEKEVSEKQAERMVNKMLDQTFDFDDFLQQTKMVSNMGSMAGVLKMLPGMAGQLSNDQLRMAEKRMARAEGLIQCMTPKERKTPDLLIRDRSARARLIRIATASGQSLDEASQFISEFQQMRSMMSSMGKNMMG---NAGP 527
BLAST of mRNA_D-herbacea_F_contig106.619.1 vs. uniprot
Match: A0A7S1U8S0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8S0_9STRA) HSP 1 Score: 482 bits (1241), Expect = 8.910e-163 Identity = 260/478 (54.39%), Postives = 349/478 (73.01%), Query Frame = 2
Query: 188 RMPSSRVSAPRGSAVTRRRAPVNMMFDTLAENMSAVANLFSGKKTISESSVEGALKEVKRALLDADVNLKVTNQLVAAVKDKAVGMTLVDGVSPEQQFVKVMNDELVEIMGSKQAPLARRTD-----------GNPTVILLAGLQGTGKTTAAAKLAKYLKADEEEPKKVLLVAGDVYRPAAIDQLISLAKRIEVEVFSMGQGVNPVDITMAGLAHAKENGFDTVIVDTAGRQVVDDSLMAELKNIQVASQADEVLLVVDAMTGQEAATLASVFNEKIGITGTVLTKMDGDTRGGAALSVQGVSQRPIKFVGVGEKLDDLEPFYPERMASRILGMGDVVTLVEKAQKEMSEEEASKLAKKMVNAEFDFNDFLKQSKMMKGMGDMGSVAKMIPGMAGKISPRQLSGVEERVKRADKLIAVMTAEERRTPNLLLSDPTSQQRLRRIAQEAGVKISEASAFMKEFQQMRQYMSNMGKQMQG 1588
R P++ +A R R + +NMMFD ++ MS+ L +GK++++E++V AL +VKRALLDADVNLKV N L+A+VK +G +V GV+PE+ F+K MND LV +MG++Q+PLA R + PTV+LLAGLQG GKTTA KLAK K +E P+KVL+ A DVYRPAAI QL L +++ V+V++ G +PV+I A A+E G+DT++VDTAGRQV+DD LM EL +I+ A DE LLVVDAMTGQEAATL F+E++ I+G +LTK+DGDTRGGAA+S+ VS RPIKF GVGEKL DLEPFYP+RMASRILGMGDVV+LVEK +KE+S+++A + KM++ FDF+DFLKQ+KM+ MG+M V KM+PGMAGKI QL + R++RA+KLI MT EER+ P+LL+ D ++++RL RIA+ AG++I++A F+ EF+ MR MS MGK + G
Sbjct: 40 RSPAALPAAARARQGGRGQWQMNMMFDRISAAMSSAGTLLTGKQSLTENNVGAALADVKRALLDADVNLKVANDLIASVKADVLGAEVVKGVAPEEYFIKCMNDGLVALMGAEQSPLADRRELDAEGKVVGPGDRPTVVLLAGLQGAGKTTACGKLAKLCKENEAAPRKVLMAACDVYRPAAIKQLQLLGEQVGVDVYTEGADADPVEIAKNAFAKAQEGGYDTLLVDTAGRQVIDDGLMEELSSIKKALTPDETLLVVDAMTGQEAATLTQRFDEQVDISGAILTKLDGDTRGGAAISINAVSGRPIKFAGVGEKLGDLEPFYPDRMASRILGMGDVVSLVEKMEKEVSKDDAEVMMNKMLDQTFDFDDFLKQAKMINNMGNMAGVMKMLPGMAGKIDNNQLREGQRRMRRAEKLIKEMTPEERKEPDLLIRDRSARERLGRIAEAAGLEINDADEFISEFEGMRTTMSRMGKGLMG 517
BLAST of mRNA_D-herbacea_F_contig106.619.1 vs. uniprot
Match: A0A5J4YVF1_PORPP (Signal recognition particle protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVF1_PORPP) HSP 1 Score: 481 bits (1239), Expect = 4.230e-162 Identity = 274/495 (55.35%), Postives = 352/495 (71.11%), Query Frame = 2
Query: 134 VDVYSALGNKQFCGLQQQRMPSSRVSAPRGSAVTR--RRAPVNMMFDTLAENMSAVANLFSGKKTISESSVEGALKEVKRALLDADVNLKVTNQLVAAVKDKAVGMTLVDGVSPEQQFVKVMNDELVEIMGSKQAPLARRTDG--NPTVILLAGLQGTGKTTAAAKLAKYLKADEEEPKKVLLVAGDVYRPAAIDQLISLAKRIEVEVFSMGQGVNPVDITMAGLAHAKENGFDTVIVDTAGRQVVDDSLMAELKNIQVASQADEVLLVVDAMTGQEAATLASVFNEKIGITGTVLTKMDGDTRGGAALSVQGVSQRPIKFVGVGEKLDDLEPFYPERMASRILGMGDVVTLVEKAQKEMSEEEASKLAKKMVNAEFDFNDFLKQSKMMKGMGDMGSVAKMIPGMAGKISPRQLSGVEERVKRADKLIAVMTAEERRTPNLLLSDPTSQQRLRRIAQEAGVKISEASAFMKEFQQMRQYMSNMGKQMQGSDPNAA 1606
VD + LG G +Q + +R RG+A +R + M+FD+LA MS G ++E +VE ++KEV+RALLDADVNLKV N L+ VK +A+G +++GV P QQF+K++ DEL IMGS+ PLAR+ +PTVILLAGLQG GKTTAAAKLA Y K+ E +P++VLL A DVYRPAAI+QL +L I+ EVF+MG V P I +++AK+N FDTVIVDTAGRQV+D LMAELK ++ + DE+LLVVDAMTGQEAA L FN+ +GITG +LTK+DGDTRGGAALSV+ VS RPIKFVGVGEK++ LEPFYPERMASRILGMGDV++ VEKAQ++M E EA +L +KMV A+FDF DF+KQ++M+ MG +G + KMIPGMAG IS QL+ E ++K A LI MT ERR P+LL+ D T++ RL+RIA +G +AS + +FQ+MR M+ MGK M P AA
Sbjct: 23 VDGFLGLGLGPSNGRRQNALRVTRCPRARGAARSRVADAGGMTMLFDSLAGQMSETMRKLQGSDKLTEKNVESSVKEVRRALLDADVNLKVVNSLIKDVKARALGEKVLEGVKPGQQFIKIIYDELARIMGSEATPLARKDASAESPTVILLAGLQGAGKTTAAAKLALYCKS-EAKPRRVLLCACDVYRPAAIEQLKTLGASIDTEVFAMGTDVEPERIAREAISYAKKNKFDTVIVDTAGRQVIDTKLMAELKRVKNSVTPDEILLVVDAMTGQEAANLTRAFNDAVGITGAILTKLDGDTRGGAALSVKQVSGRPIKFVGVGEKVEKLEPFYPERMASRILGMGDVLSFVEKAQEQMDEAEARRLTQKMVEAKFDFEDFVKQTEMITKMGSLGGMMKMIPGMAG-ISDAQLTAAERQLKLARSLINSMTRSERRNPDLLIKDRTARSRLQRIAAGSGRSSKDASQLISDFQRMRTMMARMGKTMMDGGPGAA 515
BLAST of mRNA_D-herbacea_F_contig106.619.1 vs. uniprot
Match: A0A2V3IRY4_9FLOR (Signal recognition particle protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRY4_9FLOR) HSP 1 Score: 474 bits (1220), Expect = 2.230e-160 Identity = 254/442 (57.47%), Postives = 325/442 (73.53%), Query Frame = 2
Query: 257 MMFDTLAENMSAVANLFSGKKTISESSVEGALKEVKRALLDADVNLKVTNQLVAAVKDKAVGMTLVDGVSPEQQFVKVMNDELVEIMGSKQAPLARRTDGNPTVILLAGLQGTGKTTAAAKLAKYLKADEEEPKKVLLVAGDVYRPAAIDQLISLAKRIEVEVFSMGQGVNPVDITMAGLAHAKENGFDTVIVDTAGRQVVDDSLMAELKNIQVASQADEVLLVVDAMTGQEAATLASVFNEKIGITGTVLTKMDGDTRGGAALSVQGVSQRPIKFVGVGEKLDDLEPFYPERMASRILGMGDVVTLVEKAQKEMSEEEASKLAKKMVNAEFDFNDFLKQSKMMKGMGDMGSVAKMIPGMAGKISPRQLSGVEERVKRADKLIAVMTAEERRTPNLLLSDPTSQQRLRRIAQEAGVKISEASAFMKEFQQMRQYMSNMGKQM 1582
M+FD+L E M G I+E +V GA+K+VKRALLDADVNL+V N L+ +K++A+G +V GV P Q +K+M++EL EIMG QAPLA+R+DG PTV+LLAGLQG GKTTAAAKLA Y D+ + V+L+AGDVYRPAAIDQL +L I V+VFSMG +P DI G+ KEN DT+IVDTAGRQV+D LM ELK+++ S+ DE LLVVDAMTGQEAATL FNE++GITG +LTK+DGDTRGGAALSVQ VS PIKF+GVGEK++ LEPF PERMASRILGMGDV+T VE+A+++M E EA K+ K+M+ A+FDFNDFLKQ+KM+ MG + V KM+PG+ G IS +++ E ++K AD LI MT +ER P LL S +++ R+ RI++ AG +A +K+F +MR MS M KQM
Sbjct: 1 MLFDSLTEKMGETVRKLRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKERAIGAEVVPGVDPGQMLIKIMHEELTEIMGKDQAPLAKRSDGQPTVVLLAGLQGAGKTTAAAKLALYCLKDK---RSVMLIAGDVYRPAAIDQLKTLGDMINVDVFSMGTDADPRDIIRKGIEKGKENKIDTLIVDTAGRQVIDAKLMKELKDVKDISKPDETLLVVDAMTGQEAATLTRSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFIGVGEKVEKLEPFIPERMASRILGMGDVLTFVERAKEQMDEREAEKMTKRMMEAKFDFNDFLKQTKMISSMGSLAGVMKMLPGV-GSISSAKMAQAEAKLKLADSLIKSMTVKERTNPELLYSGGSARSRILRISKGAGRSRDDAEDLVKDFLKMRDMMSRMSKQM 438
BLAST of mRNA_D-herbacea_F_contig106.619.1 vs. uniprot
Match: R7QHF1_CHOCR (Signal recognition particle SRP54 homolog ffh n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHF1_CHOCR) HSP 1 Score: 471 bits (1211), Expect = 3.180e-159 Identity = 254/438 (57.99%), Postives = 321/438 (73.29%), Query Frame = 2
Query: 311 GKKTISESSVEGALKEVKRALLDADVNLKVTNQLVAAVKDKAVGMTLVDGVSPEQQFVKVMNDELVEIMGSKQAPLARRTDGNPTVILLAGLQGTGKTTAAAKLAKYLKADEEEPKKVLLVAGDVYRPAAIDQLISLAKRIEVEVFSMGQGVNPVDITMAGLAHAKENGFDTVIVDTAGRQVVDDSLMAELKNIQVASQADEVLLVVDAMTGQEAATLASVFNEKIGITGTVLTKMDGDTRGGAALSVQGVSQRPIKFVGVGEKLDDLEPFYPERMASRILGMGDVVTLVEKAQKEMSEEEASKLAKKMVNAEFDFNDFLKQSKMMKGMGDMGSVAKMIPGMAGKISPRQLSGVEERVKRADKLIAVMTAEERRTPNLLLSDPTSQQRLRRIAQEAGVKISEASAFMKEFQQMRQYMSNMGKQMQGSDPNAAPGSSSP 1624
G I+E +V GA+K+VKRALLDADVNL+V N L+ +K +AVG + GV P Q VK+M++EL +IMGS QAPLA RTDG PTV+LLAGLQG GKTTAAAKLA Y +E + V+++A DVYRPAAIDQL +L K IEV+VF MG VNP +I GL K +T+IVDTAGRQV+D LM ELK+I+ S+ADE LLVVDAMTGQEAATL FN+++GITG +LTK+DGDTRGGAALSVQ VS PIKF+GVGEK+ LEPFYPERMASRILGMGDV+T+VEKAQ M E EA K+ +KM+ +FDFNDFLKQ+KM+ MG +G + KM+PG+ G+I+ +L E ++K AD +I MT +ER P LL + P+S+ R+ RIA +G +++A + +FQ+MR M M KQM G P+ P +P
Sbjct: 3 GVDKITEKNVTGAMKDVKRALLDADVNLRVVNALLKQIKARAVGADVTPGVEPGQMLVKIMHEELTKIMGSNQAPLANRTDGEPTVVLLAGLQGAGKTTAAAKLALYCLKEE---RSVMMIAADVYRPAAIDQLKTLGKSIEVDVFQMGTDVNPREIVRKGLQEGKTRKINTIIVDTAGRQVIDAKLMKELKDIKSVSKADETLLVVDAMTGQEAATLTRSFNDEVGITGAILTKLDGDTRGGAALSVQQVSGSPIKFIGVGEKVQKLEPFYPERMASRILGMGDVLTIVEKAQDVMDEAEAEKMTRKMMENKFDFNDFLKQTKMLSQMGSLGGLMKMMPGIGGQINESKLKEAEVKLKVADSIIKSMTKQERGNPELLYTAPSSRSRVERIANGSGRSLAQAKNMISDFQKMRTMMQRMSKQMVGG-PDGTPAEGAP 436
BLAST of mRNA_D-herbacea_F_contig106.619.1 vs. uniprot
Match: A0A0G4GPH7_VITBC (SRP54 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GPH7_VITBC) HSP 1 Score: 468 bits (1204), Expect = 1.780e-157 Identity = 250/465 (53.76%), Postives = 329/465 (70.75%), Query Frame = 2
Query: 257 MMFDTLAENMSAVANLFSGKKTISESSVEGALKEVKRALLDADVNLKVTNQLVAAVKDKAVGMTLVDGVSPEQQFVKVMNDELVEIMGSKQAPLARRTDGNPTVILLAGLQGTGKTTAAAKLAKYLKADEE---------------------EPKKVLLVAGDVYRPAAIDQLISLAKRIEVEVFSMGQGVNPVDITMAGLAHAKENGFDTVIVDTAGRQVVDDSLMAELKNIQVASQADEVLLVVDAMTGQEAATLASVFNEKIGITGTVLTKMDGDTRGGAALSVQGVSQRPIKFVGVGEKLDDLEPFYPERMASRILGMGDVVTLVEKAQKEMSEEEASKLAKKMVNAEFDFNDFLKQSKMMKGMGDMGSVAKMIPGMAGKISPRQLSGVEERVKRADKLIAVMTAEERRTPNLLLSDPTSQQRLRRIAQEAGVKISEASAFMKEFQQMRQYMSNMGKQMQG 1588
M+FD++ ++ + + G ++ ++E A++E+++ LLDADVN +V N LV AVK+KAVG +D V+P QQFVK++ DELV+IMG +AP+A PTV+LLAGLQG GKTTAAAKLA YL+ + +P+KVLLVA DVYRPAAIDQL L +R+ EVF+MGQ V+PVDI G+A+AKE G+DTVIVDTAGRQVVDD+LMAELK I+ A DEVLLVVDAMTGQEAA L FNE+IGI+G +LTK+DGDTRGG+ALSV+GVS +PIKFVGVGE +D LEPFYP+RMASRI+GMGDVV+LVEKAQK+MSE +A L K++ ++DFNDF+KQS M+ MG +G IPGM+ +S Q+ + ++ ++ I MT EER +P+L + +QQR+RR+A E I E F+++F + R+ M M +QM G
Sbjct: 1 MVFDSITSKITGILDTIRGADKLTAENIEEAVQEMRKVLLDADVNFQVANSLVKAVKEKAVGERRIDNVNPSQQFVKILYDELVDIMGGDEAPIATSATDQPTVLLLAGLQGAGKTTAAAKLALYLQTPQTRLDASGDAEGGEGEGGKGTMTKPRKVLLVAADVYRPAAIDQLQILGERVGCEVFTMGQDVDPVDIVKQGVAYAKEQGYDTVIVDTAGRQVVDDALMAELKRIKEAVPPDEVLLVVDAMTGQEAALLTQTFNEQIGISGAILTKLDGDTRGGSALSVRGVSGKPIKFVGVGEGMDKLEPFYPKRMASRIIGMGDVVSLVEKAQKQMSERDALDLTKRIQKGQYDFNDFMKQSDMINKMGSVGQFLSYIPGMSNMVSRDQIKTMSKKFRKYRTFIDAMTEEERESPDLFTKEKGAQQRMRRLADETDEPIEEVQGFVRDFMKQRRQMMLMSRQMMG 465
BLAST of mRNA_D-herbacea_F_contig106.619.1 vs. uniprot
Match: A0A6T5W5G4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5W5G4_9RHOD) HSP 1 Score: 467 bits (1201), Expect = 2.150e-156 Identity = 258/484 (53.31%), Postives = 339/484 (70.04%), Query Frame = 2
Query: 236 RRRAPVNMMFDTLAENMSAVANLFSGKKTISESSVEGALKEVKRALLDADVNLKVTNQLVAAVKDKAVGMTLVDGVSPEQQFVKVMNDELVEIMGSKQAPLARRTDGNPTVILLAGLQGTGKTTAAAKLAKYLKADEEEP-----------------KKVLLVAGDVYRPAAIDQLISLAKRIEVEVFSMGQGVNPVDITMAGLAHAKENGFDTVIVDTAGRQVVDDSLMAELKNIQVASQADEVLLVVDAMTGQEAATLASVFNEKIGITGTVLTKMDGDTRGGAALSVQGVSQRPIKFVGVGEKLDDLEPFYPERMASRILGMGDVVTLVEKAQKEMSEEEASKLAKKMVNAEFDFNDFLKQSKMMKGMGDMGSVAKMIPGMAGKISPRQLSGVEERVKRADKLIAVMTAEERRTPNLLLSDPTSQQRLRRIAQEAGVKISEASAFMKEFQQMRQYMSNMGKQMQGSDPNAAPGSSSPFAGM 1636
RR V M+FDTLA + G I+E +V A+K+VKRALLDADVNL+V N+LV V+ +AVGM ++ GV+P QQFVK++ +EL +MG+ PLA T +P VILLAGLQG GKTTAAAKLA Y KA P KKVLLVA DVYRPAAI+QL +L RIE EVFS+G ++P I GL +A++NGFDTVIVDTAGRQV+D +LM+ELK ++ A E LLVVDAMTGQEAA L FN+++GI+G +LTK+DGDTRGGAALSVQ VS +PIKF+GVGE ++ LEPFYPERMASRILGMGDV++ VEKAQ+ + E++A+++ KKM+ A+FDF+DFLKQ+ MM MG + KM+PGM+G I QL+ E ++K + +I MT ERR P+LL+SD +++ RL RIA AG ++A+ + +FQ+MR M+ M + M G+ N+ S+ +G+
Sbjct: 35 RRALHVVMLFDTLAGKLGETVRKLQGSDRINEKNVAAAMKDVKRALLDADVNLRVVNKLVKEVQQRAVGMEVLPGVTPGQQFVKIIYEELSRVMGADATPLASPTGSDPVVILLAGLQGAGKTTAAAKLALYCKAPPAPPVGADGAAQNAVVARAPAKKVLLVAADVYRPAAIEQLKTLGARIETEVFSLGTELSPEQIAKQGLEYARKNGFDTVIVDTAGRQVIDSNLMSELKRVKAAVSPSETLLVVDAMTGQEAANLTQAFNDQVGISGAILTKLDGDTRGGAALSVQQVSGKPIKFIGVGETVEKLEPFYPERMASRILGMGDVLSFVEKAQEAVEEKQAAEMTKKMLQAQFDFDDFLKQTAMMSKMGSFAGMMKMLPGMSG-IDETQLASAEAKLKVSTSMIQSMTKAERRRPDLLISDRSARSRLSRIANGAGRSFTDANTLISDFQRMRTMMARMSRTMVGNAMNSGVDPSAAMSGL 517 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig106.619.1 >prot_D-herbacea_F_contig106.619.1 ID=prot_D-herbacea_F_contig106.619.1|Name=mRNA_D-herbacea_F_contig106.619.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=540bp MMVAGRMLAVATAAASFCCLVPTSADAFVYNCFPRQHVDVYSALGNKQFCback to top mRNA from alignment at D-herbacea_F_contig106:370961..372602+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig106.619.1 ID=mRNA_D-herbacea_F_contig106.619.1|Name=mRNA_D-herbacea_F_contig106.619.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1642bp|location=Sequence derived from alignment at D-herbacea_F_contig106:370961..372602+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig106:370961..372602+ >mRNA_D-herbacea_F_contig106.619.1 ID=mRNA_D-herbacea_F_contig106.619.1|Name=mRNA_D-herbacea_F_contig106.619.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=3240bp|location=Sequence derived from alignment at D-herbacea_F_contig106:370961..372602+ (Desmarestia herbacea DmunF female)back to top |