prot_D-herbacea_M_contig97.16106.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig97.16106.1
Unique Nameprot_D-herbacea_M_contig97.16106.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length217
Homology
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BLAST of mRNA_D-herbacea_M_contig97.16106.1 vs. uniprot
Match: D7FRN2_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN2_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 2.660e-12
Identity = 57/148 (38.51%), Postives = 75/148 (50.68%), Query Frame = 0 
Query:   44 TNLADWGQALGEALGSDPEVSRFTTLGKYGVVLSLGEGSERTFEPPVVDFGDVATVAVV------AGGRRREFSG------------------------GAGGDRQAVEGCMNGDVFGAEVEREEQLEEPKYMPDGYDFVGERRAVIN 161
            + L  W  +LG AL S+ EV  + T GKYGVVLSLGE  E    PPVVDFGDVATV          GGR ++                           GAG  +   +   NG + G E +R+E+ E+ +Y+P GY+F  ERRAV++
Sbjct:   95 SKLDQWTVSLGGALASNTEVCDYVTKGKYGVVLSLGEDPE----PPVVDFGDVATVVPSPREGGRGGGRGQQPLAENGEDQAAERPSEWGATQHDDSVWGAGWGQNGQQTLGNGGMQGRE-DRDEEEEDGEYLPQGYNFSRERRAVMH 237
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BLAST of mRNA_D-herbacea_M_contig97.16106.1 vs. uniprot
Match: A0A6H5L991_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L991_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.150e-7
Identity = 44/87 (50.57%), Postives = 50/87 (57.47%), Query Frame = 0 
Query:   14 SPQPQPGRSGGSVLLNGASSSSDLSESPRYTNLAD-WGQALGEALGSDPEVSRFTTLGKYGVVLSLGEGSERTFEPPVVDFGDVATV 99
            SP   P   GG   L   SS  D  +S   ++  D W  +LG AL S+ EV  + T GKYGVVLSLGE  E    PPVVDFGDVATV
Sbjct:  295 SPNCSPASPGGFRPLPLGSSVGD--DSGHVSSKLDRWTVSLGGALASNTEVCDYVTKGKYGVVLSLGEDPE----PPVVDFGDVATV 375
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig97.16106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRN2_ECTSI2.660e-1238.51RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5L991_9PHAE1.150e-750.57Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig97contigD-herbacea_M_contig97:256497..257881 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig97.16106.1mRNA_D-herbacea_M_contig97.16106.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig97 256495..257881 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig97.16106.1 ID=prot_D-herbacea_M_contig97.16106.1|Name=mRNA_D-herbacea_M_contig97.16106.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=217bp
QGQGTGEAGRHFVSPQPQPGRSGGSVLLNGASSSSDLSESPRYTNLADWG
QALGEALGSDPEVSRFTTLGKYGVVLSLGEGSERTFEPPVVDFGDVATVA
VVAGGRRREFSGGAGGDRQAVEGCMNGDVFGAEVEREEQLEEPKYMPDGY
DFVGERRAVINNRPSSSHAPALLPHATPMAPVGSRSDARTRRGNINSVDR
APSRPAMNLAERGNGLG
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