prot_D-herbacea_M_contig97.16097.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-herbacea_M_contig97.16097.1
Unique Name	prot_D-herbacea_M_contig97.16097.1
Type	polypeptide
Organism	Desmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length	253

Homology

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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A6H5LDQ8_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDQ8_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 1.190e-99
Identity = 161/210 (76.67%), Postives = 178/210 (84.76%), Query Frame = 0

Query:   19 GAMEPPYDDSSGDVAALDTPGVD-TEAANKEAKKGIKRPL--KPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 225
            G ME P  D    V+  D       E+A+   +   ++PL  KPLS RK+++YNEGL KRGVVYLSRVPPFMKPA+VKHLMEQHGVVTRVYLVEE++ANRRARKK GGNS KRY EGW+EFEDKK+ARA AESLNNTLIGG+KRN+YHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARY+ELVESGRSF KMEER
Sbjct:   44 GTMEEPATDPQAQVSRGDLDSEKGPESADDNDQVDTRQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRVPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKGGGNSGKRYAEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 253

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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A2D4BVT2_PYTIN (Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVT2_PYTIN)

HSP 1 Score: 222 bits (565), Expect = 4.440e-69
Identity = 114/195 (58.46%), Postives = 146/195 (74.87%), Query Frame = 0

Query:   32 VAALDTPGVDTEAANKEAKKGIKRPLKP-LSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 225
            ++ +++  V TE A+ + K   KR     LS +K+E Y E   KRGVVY+SRVPPFMKP ++KHL+ Q+G + RVYLV E++A ++ R  AGGN   +YTEGWIEFEDKK+A++VA  LN   IGG+KR++YHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  YLE VE  + FQKMEER
Sbjct:    1 MSDIESNPVSTETASVQDKTSRKRKKDAVLSTKKLEEYRERAAKRGVVYISRVPPFMKPEKLKHLLGQYGAINRVYLVPEDKAQQKRRVAAGGNRKTKYTEGWIEFEDKKVAKSVAAMLNTKQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIREQKLRMEIAQAKKENDAYLERVEQSKQFQKMEER 195

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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: K3WDP5_GLOUD (RRM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDP5_GLOUD)

HSP 1 Score: 219 bits (559), Expect = 5.230e-68
Identity = 112/200 (56.00%), Postives = 146/200 (73.00%), Query Frame = 0

Query:   26 DDSSGDVAALDTPGVDTEAANKEAKKGIKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 225
            D+S     A  TP    +   ++AKK  KR    LS+ K+E + +  +KRGVVY+SRVPPFMKP +VKHL+ Q+G + R+YLV E++ + + R  AGGN  + YTEGWIEFEDKK+A+ VA+ LN   IGG+KR++YHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  YLE VE  + F+KMEER
Sbjct:    3 DESPAAAPAEATPAA-VDVKTEDAKKPAKRSKLDLSREKMEQFKKKAEKRGVVYISRVPPFMKPEKVKHLLGQYGDINRIYLVPEDKTHHKKRVAAGGNRKQSYTEGWIEFEDKKVAKQVAKVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLEKVEQSKKFEKMEER 201

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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A5D6Y296_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y296_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.760e-66
Identity = 107/173 (61.85%), Postives = 132/173 (76.30%), Query Frame = 0

Query:   53 IKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 225
            +KR    LS+ K+E + +   KRGVVYLSRVPPFMKP +VKHL+ Q G + R+YLV E++ N + R  AGGN  + YTEGWIEFEDKK+AR VA  LN   IGG+KR++YHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLRLE  QAK+EN  YL+ VE  + F+KMEER
Sbjct:   15 LKRSRADLSREKLEAFKKRADKRGVVYLSRVPPFMKPEKVKHLLGQFGDINRIYLVPEDKTNHKKRVAAGGNRKQSYTEGWIEFEDKKVARQVAAVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRLEIAQAKKENEAYLDKVEQSKQFEKMEER 187

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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: H3HB09_PHYRM (RRM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB09_PHYRM)

HSP 1 Score: 212 bits (539), Expect = 3.440e-65
Identity = 99/171 (57.89%), Postives = 137/171 (80.12%), Query Frame = 0

Query:   55 RPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 225
            +PL  LS+ K+E + E  ++RGVVY++RVPPFMKP +++HL+ ++G + R+YLV E+++  + R  AGGN  ++YTEGW+EFEDKK+A+ VA+ LN TLIGG+KR++YHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  YLE V+  + F+KM+ R
Sbjct:   16 KPLAGLSREKMEQFKEMAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKSLHKKRVSAGGNRRQKYTEGWLEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMDAR 186

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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A0P1B2U2_PLAHL (Pre-rrna-processing protein esf2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2U2_PLAHL)

HSP 1 Score: 209 bits (532), Expect = 3.160e-64
Identity = 100/173 (57.80%), Postives = 134/173 (77.46%), Query Frame = 0

Query:   53 IKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 225
            + +PL  LS+ K+  + E  ++RGVVY++RVPPFMKP +++HL+ ++G + R+YLV E++   + R  AGGN   +YTEGWIEFEDKK+A+ VA+ LN T IGG+KR++YHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  YLE VE  +  +KMEER
Sbjct:    9 VAKPLAGLSREKMMQFKEKTERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRMKYTEGWIEFEDKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEVYLERVEQSKQLEKMEER 181

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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A3R7J166_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J166_9STRA)

HSP 1 Score: 209 bits (531), Expect = 3.370e-64
Identity = 103/184 (55.98%), Postives = 138/184 (75.00%), Query Frame = 0

Query:   45 ANKEA---KKGIKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 225
            AN EA   K    +PL+ LS+ K+E + +  +KRGVVY++RVPPFMKP +++HL+ ++G + R+YLV E++   + R  AGGN    YTEGWIEFEDKK+A+ VA+ LN T IGG+KR++YHDDMWN KYL+ FKWDHLTEK+AYE R+R QKLR+E  Q+K+EN  YLE V+  + F+KME R
Sbjct:    2 ANMEASSSKPATHKPLEGLSREKMEQFKQKAEKRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRTNYTEGWIEFEDKKIAKRVAKMLNTTQIGGRKRDYYHDDMWNFKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQSKKENEAYLERVDQSKQFEKMEAR 185

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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A8K1FEZ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEZ1_PYTOL)

HSP 1 Score: 209 bits (531), Expect = 5.930e-64
Identity = 105/198 (53.03%), Postives = 140/198 (70.71%), Query Frame = 0

Query:   28 SSGDVAALDTPGVDTEAANKEAKKGIKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 225
            S  +  A     +D E A  + KK        LSK K++ Y E + KRGVVY+SRVPP+MKP ++KHL+ ++G + R+YLV E++  ++ R  AGGN   +YTEGW+EFE+KK+A+ VA  LN   IGG+KR++YHDD+WNLKYL+ FKW+HLTEK+AYE R+R QKLR+E  QAK+EN  YLE VE  + F KMEER
Sbjct:    2 SDSETTATPREALDAELAKSKTKKR----KAVLSKAKLDEYRERVAKRGVVYISRVPPYMKPEKLKHLLSKYGDINRIYLVPEDKVQQKKRVAAGGNRKTKYTEGWVEFENKKVAKTVATMLNTKQIGGRKRDYYHDDIWNLKYLKGFKWEHLTEKIAYENRIRDQKLRMEIAQAKKENDAYLERVEQSKQFTKMEER 195

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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: D0MVG4_PHYIT (Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVG4_PHYIT)

HSP 1 Score: 208 bits (530), Expect = 7.410e-64
Identity = 99/169 (58.58%), Postives = 134/169 (79.29%), Query Frame = 0

Query:   57 LKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 225
            L  LS+ K+E + E  ++RGVVY++RVPPFMKP +++HL+ ++G + R+YLV E++A  + R  +GGN  ++YTEGWIEFE+KK+A+ VA+ LN T IGG+KR++YHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  YLE VE  + F+KME R
Sbjct:   18 LADLSREKMEQFKEKAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFENKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEAR 186

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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A225WD52_9STRA (Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WD52_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.360e-62
Identity = 98/171 (57.31%), Postives = 134/171 (78.36%), Query Frame = 0

Query:   55 RPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 225
            +PL  LS+ K+E + E  ++RGVVY++RVPPFMKP +++HL+ ++  + R+YLV E++A  + R  AGGN  ++YTEGWIEFEDKK+A+ VA+ LN T IGG+KR++YHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  Q K+EN  YLE V+  + F+KME R
Sbjct:    9 KPLTGLSREKMEQFKEKAERRGVVYIARVPPFMKPEKLRHLLGKYSDLHRIYLVPEDKALHQKRVSAGGNRRQKYTEGWIEFEDKKVAKRVAKMLNATQIGGRKRDYYHDDLWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQDKKENEAYLERVDQSKQFEKMEAR 179

The following BLAST results are available for this feature:

BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot

BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LDQ8_9PHAE	1.190e-99	76.67	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A2D4BVT2_PYTIN	4.440e-69	58.46	Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium i...	[more]
K3WDP5_GLOUD	5.230e-68	56.00	RRM domain-containing protein n=1 Tax=Globisporang...	[more]
A0A5D6Y296_9STRA	1.760e-66	61.85	RRM domain-containing protein n=1 Tax=Pythium bras...	[more]
H3HB09_PHYRM	3.440e-65	57.89	RRM domain-containing protein n=1 Tax=Phytophthora...	[more]
A0A0P1B2U2_PLAHL	3.160e-64	57.80	Pre-rrna-processing protein esf2 n=1 Tax=Plasmopar...	[more]
A0A3R7J166_9STRA	3.370e-64	55.98	RRM domain-containing protein n=2 Tax=Phytophthora...	[more]
A0A8K1FEZ1_PYTOL	5.930e-64	53.03	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
D0MVG4_PHYIT	7.410e-64	58.58	Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophth...	[more]
A0A225WD52_9STRA	1.360e-62	57.31	Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophth...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 183..203
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 41..163 e-value: 1.7E-8 score: 36.4
IPR039119	ABT1/Esf2	PANTHER	PTHR12311	FAMILY NOT NAMED	coord: 43..233
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 62..158

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-herbacea_M_contig97	contig	D-herbacea_M_contig97:171033..175610 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male	2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90	2022-09-16
OGS1.0 of Desmarestia herbacea DmunM male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-herbacea_M_contig97.16097.1	mRNA_D-herbacea_M_contig97.16097.1	Desmarestia herbacea DmunM male	mRNA	D-herbacea_M_contig97 171033..175610 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-herbacea_M_contig97.16097.1 ID=prot_D-herbacea_M_contig97.16097.1|Name=mRNA_D-herbacea_M_contig97.16097.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=253bp
LVSSLGYCPWLAKTRDTTGAMEPPYDDSSGDVAALDTPGVDTEAANKEAK
KGIKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHG
VVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLN
NTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETM
QAKRENARYLELVESGRSFQKMEERKRKRREDEAGAGGAPTASSAGGGGG
GEA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR039119	ABT1/Esf2
IPR012677	Nucleotide-bd_a/b_plait_sf