mRNA_D-herbacea_M_contig97.16097.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig97.16097.1
Unique NamemRNA_D-herbacea_M_contig97.16097.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A6H5LDQ8_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDQ8_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 1.190e-99
Identity = 161/210 (76.67%), Postives = 178/210 (84.76%), Query Frame = 1 
Query:   55 GAMEPPYDDSSGDVAALDTPGVD-TEAANKEAKKGIKRPL--KPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 675
            G ME P  D    V+  D       E+A+   +   ++PL  KPLS RK+++YNEGL KRGVVYLSRVPPFMKPA+VKHLMEQHGVVTRVYLVEE++ANRRARKK GGNS KRY EGW+EFEDKK+ARA AESLNNTLIGG+KRN+YHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARY+ELVESGRSF KMEER
Sbjct:   44 GTMEEPATDPQAQVSRGDLDSEKGPESADDNDQVDTRQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRVPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKGGGNSGKRYAEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 253
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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A2D4BVT2_PYTIN (Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVT2_PYTIN)

HSP 1 Score: 222 bits (565), Expect = 4.440e-69
Identity = 114/195 (58.46%), Postives = 146/195 (74.87%), Query Frame = 1 
Query:   94 VAALDTPGVDTEAANKEAKKGIKRPLKP-LSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 675
            ++ +++  V TE A+ + K   KR     LS +K+E Y E   KRGVVY+SRVPPFMKP ++KHL+ Q+G + RVYLV E++A ++ R  AGGN   +YTEGWIEFEDKK+A++VA  LN   IGG+KR++YHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  YLE VE  + FQKMEER
Sbjct:    1 MSDIESNPVSTETASVQDKTSRKRKKDAVLSTKKLEEYRERAAKRGVVYISRVPPFMKPEKLKHLLGQYGAINRVYLVPEDKAQQKRRVAAGGNRKTKYTEGWIEFEDKKVAKSVAAMLNTKQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIREQKLRMEIAQAKKENDAYLERVEQSKQFQKMEER 195
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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: K3WDP5_GLOUD (RRM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDP5_GLOUD)

HSP 1 Score: 219 bits (559), Expect = 5.230e-68
Identity = 112/200 (56.00%), Postives = 146/200 (73.00%), Query Frame = 1 
Query:   76 DDSSGDVAALDTPGVDTEAANKEAKKGIKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 675
            D+S     A  TP    +   ++AKK  KR    LS+ K+E + +  +KRGVVY+SRVPPFMKP +VKHL+ Q+G + R+YLV E++ + + R  AGGN  + YTEGWIEFEDKK+A+ VA+ LN   IGG+KR++YHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  YLE VE  + F+KMEER
Sbjct:    3 DESPAAAPAEATPAA-VDVKTEDAKKPAKRSKLDLSREKMEQFKKKAEKRGVVYISRVPPFMKPEKVKHLLGQYGDINRIYLVPEDKTHHKKRVAAGGNRKQSYTEGWIEFEDKKVAKQVAKVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLEKVEQSKKFEKMEER 201
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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A5D6Y296_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y296_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.760e-66
Identity = 107/173 (61.85%), Postives = 132/173 (76.30%), Query Frame = 1 
Query:  157 IKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 675
            +KR    LS+ K+E + +   KRGVVYLSRVPPFMKP +VKHL+ Q G + R+YLV E++ N + R  AGGN  + YTEGWIEFEDKK+AR VA  LN   IGG+KR++YHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLRLE  QAK+EN  YL+ VE  + F+KMEER
Sbjct:   15 LKRSRADLSREKLEAFKKRADKRGVVYLSRVPPFMKPEKVKHLLGQFGDINRIYLVPEDKTNHKKRVAAGGNRKQSYTEGWIEFEDKKVARQVAAVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRLEIAQAKKENEAYLDKVEQSKQFEKMEER 187
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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: H3HB09_PHYRM (RRM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB09_PHYRM)

HSP 1 Score: 212 bits (539), Expect = 3.440e-65
Identity = 99/171 (57.89%), Postives = 137/171 (80.12%), Query Frame = 1 
Query:  163 RPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 675
            +PL  LS+ K+E + E  ++RGVVY++RVPPFMKP +++HL+ ++G + R+YLV E+++  + R  AGGN  ++YTEGW+EFEDKK+A+ VA+ LN TLIGG+KR++YHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  YLE V+  + F+KM+ R
Sbjct:   16 KPLAGLSREKMEQFKEMAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKSLHKKRVSAGGNRRQKYTEGWLEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMDAR 186
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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A0P1B2U2_PLAHL (Pre-rrna-processing protein esf2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2U2_PLAHL)

HSP 1 Score: 209 bits (532), Expect = 3.160e-64
Identity = 100/173 (57.80%), Postives = 134/173 (77.46%), Query Frame = 1 
Query:  157 IKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 675
            + +PL  LS+ K+  + E  ++RGVVY++RVPPFMKP +++HL+ ++G + R+YLV E++   + R  AGGN   +YTEGWIEFEDKK+A+ VA+ LN T IGG+KR++YHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  YLE VE  +  +KMEER
Sbjct:    9 VAKPLAGLSREKMMQFKEKTERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRMKYTEGWIEFEDKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEVYLERVEQSKQLEKMEER 181
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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A3R7J166_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J166_9STRA)

HSP 1 Score: 209 bits (531), Expect = 3.370e-64
Identity = 103/184 (55.98%), Postives = 138/184 (75.00%), Query Frame = 1 
Query:  133 ANKEA---KKGIKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 675
            AN EA   K    +PL+ LS+ K+E + +  +KRGVVY++RVPPFMKP +++HL+ ++G + R+YLV E++   + R  AGGN    YTEGWIEFEDKK+A+ VA+ LN T IGG+KR++YHDDMWN KYL+ FKWDHLTEK+AYE R+R QKLR+E  Q+K+EN  YLE V+  + F+KME R
Sbjct:    2 ANMEASSSKPATHKPLEGLSREKMEQFKQKAEKRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRTNYTEGWIEFEDKKIAKRVAKMLNTTQIGGRKRDYYHDDMWNFKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQSKKENEAYLERVDQSKQFEKMEAR 185
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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A8K1FEZ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEZ1_PYTOL)

HSP 1 Score: 209 bits (531), Expect = 5.930e-64
Identity = 105/198 (53.03%), Postives = 140/198 (70.71%), Query Frame = 1 
Query:   82 SSGDVAALDTPGVDTEAANKEAKKGIKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 675
            S  +  A     +D E A  + KK        LSK K++ Y E + KRGVVY+SRVPP+MKP ++KHL+ ++G + R+YLV E++  ++ R  AGGN   +YTEGW+EFE+KK+A+ VA  LN   IGG+KR++YHDD+WNLKYL+ FKW+HLTEK+AYE R+R QKLR+E  QAK+EN  YLE VE  + F KMEER
Sbjct:    2 SDSETTATPREALDAELAKSKTKKR----KAVLSKAKLDEYRERVAKRGVVYISRVPPYMKPEKLKHLLSKYGDINRIYLVPEDKVQQKKRVAAGGNRKTKYTEGWVEFENKKVAKTVATMLNTKQIGGRKRDYYHDDIWNLKYLKGFKWEHLTEKIAYENRIRDQKLRMEIAQAKKENDAYLERVEQSKQFTKMEER 195
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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: D0MVG4_PHYIT (Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVG4_PHYIT)

HSP 1 Score: 208 bits (530), Expect = 7.410e-64
Identity = 99/169 (58.58%), Postives = 134/169 (79.29%), Query Frame = 1 
Query:  169 LKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 675
            L  LS+ K+E + E  ++RGVVY++RVPPFMKP +++HL+ ++G + R+YLV E++A  + R  +GGN  ++YTEGWIEFE+KK+A+ VA+ LN T IGG+KR++YHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  YLE VE  + F+KME R
Sbjct:   18 LADLSREKMEQFKEKAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFENKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEAR 186
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BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Match: A0A225WD52_9STRA (Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WD52_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.360e-62
Identity = 98/171 (57.31%), Postives = 134/171 (78.36%), Query Frame = 1 
Query:  163 RPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHGVVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLNNTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYLELVESGRSFQKMEER 675
            +PL  LS+ K+E + E  ++RGVVY++RVPPFMKP +++HL+ ++  + R+YLV E++A  + R  AGGN  ++YTEGWIEFEDKK+A+ VA+ LN T IGG+KR++YHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  Q K+EN  YLE V+  + F+KME R
Sbjct:    9 KPLTGLSREKMEQFKEKAERRGVVYIARVPPFMKPEKLRHLLGKYSDLHRIYLVPEDKALHQKRVSAGGNRRQKYTEGWIEFEDKKVAKRVAKMLNATQIGGRKRDYYHDDLWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQDKKENEAYLERVDQSKQFEKMEAR 179
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig97.16097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LDQ8_9PHAE1.190e-9976.67RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A2D4BVT2_PYTIN4.440e-6958.46Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium i... [more]
K3WDP5_GLOUD5.230e-6856.00RRM domain-containing protein n=1 Tax=Globisporang... [more]
A0A5D6Y296_9STRA1.760e-6661.85RRM domain-containing protein n=1 Tax=Pythium bras... [more]
H3HB09_PHYRM3.440e-6557.89RRM domain-containing protein n=1 Tax=Phytophthora... [more]
A0A0P1B2U2_PLAHL3.160e-6457.80Pre-rrna-processing protein esf2 n=1 Tax=Plasmopar... [more]
A0A3R7J166_9STRA3.370e-6455.98RRM domain-containing protein n=2 Tax=Phytophthora... [more]
A0A8K1FEZ1_PYTOL5.930e-6453.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0MVG4_PHYIT7.410e-6458.58Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophth... [more]
A0A225WD52_9STRA1.360e-6257.31Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig97contigD-herbacea_M_contig97:171033..175610 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.1
Seed ortholog evalue5.9e-55
Seed eggNOG ortholog65071.PYU1_T003086
Preferred nameABT1
KEGG koko:K14785
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0001671,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0005730,GO:0005737,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006364,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007275,GO:0007399,GO:0007417,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009617,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021953,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030182,GO:0030234,GO:0030490,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032781,GO:0032991,GO:0034462,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0042742,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043462,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048513,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051336,GO:0051345,GO:0051704,GO:0051707,GO:0060255,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0097659,GO:0098542,GO:0098772,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.Pre-rRNA-processing protein ESF2. Source PGD
EggNOG OGs1MBIF@121069,KOG3152@1,KOG3152@2759
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-12_002630.1
COG Functional cat.K
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons4
Model size761
Cds size759
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig97.16097.1prot_D-herbacea_M_contig97.16097.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig97 171033..175610 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935794.542159-CDS-D-herbacea_M_contig97:171032..1713441622935794.542159-CDS-D-herbacea_M_contig97:171032..171344Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 171033..171344 +
1690880707.0523112-CDS-D-herbacea_M_contig97:171032..1713441690880707.0523112-CDS-D-herbacea_M_contig97:171032..171344Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 171033..171344 +
1622935794.5585847-CDS-D-herbacea_M_contig97:172062..1721801622935794.5585847-CDS-D-herbacea_M_contig97:172062..172180Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 172063..172180 +
1690880707.0676742-CDS-D-herbacea_M_contig97:172062..1721801690880707.0676742-CDS-D-herbacea_M_contig97:172062..172180Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 172063..172180 +
1622935794.5758114-CDS-D-herbacea_M_contig97:174538..1747191622935794.5758114-CDS-D-herbacea_M_contig97:174538..174719Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 174539..174719 +
1690880707.0793023-CDS-D-herbacea_M_contig97:174538..1747191690880707.0793023-CDS-D-herbacea_M_contig97:174538..174719Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 174539..174719 +
1622935794.589862-CDS-D-herbacea_M_contig97:175462..1756101622935794.589862-CDS-D-herbacea_M_contig97:175462..175610Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 175463..175610 +
1690880707.0953777-CDS-D-herbacea_M_contig97:175462..1756101690880707.0953777-CDS-D-herbacea_M_contig97:175462..175610Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig97 175463..175610 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig97.16097.1

>prot_D-herbacea_M_contig97.16097.1 ID=prot_D-herbacea_M_contig97.16097.1|Name=mRNA_D-herbacea_M_contig97.16097.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=253bp
LVSSLGYCPWLAKTRDTTGAMEPPYDDSSGDVAALDTPGVDTEAANKEAK
KGIKRPLKPLSKRKVENYNEGLKKRGVVYLSRVPPFMKPARVKHLMEQHG
VVTRVYLVEENEANRRARKKAGGNSSKRYTEGWIEFEDKKMARAVAESLN
NTLIGGKKRNFYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETM
QAKRENARYLELVESGRSFQKMEERKRKRREDEAGAGGAPTASSAGGGGG
GEA
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mRNA from alignment at D-herbacea_M_contig97:171033..175610+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig97.16097.1 ID=mRNA_D-herbacea_M_contig97.16097.1|Name=mRNA_D-herbacea_M_contig97.16097.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=4578bp|location=Sequence derived from alignment at D-herbacea_M_contig97:171033..175610+ (Desmarestia herbacea DmunM male)
CTCGTAAGCTCGCTTGGCTATTGTCCGTGGCTGGCCAAGACTCGAGACAC
TACTGGCGCAATGGAACCTCCTTATGATGATAGCTCTGGTGATGTTGCAG
CATTGGATACCCCCGGAGTTGATACTGAAGCGGCCAACAAGGAGGCTAAG
AAGGGCATCAAGCGGCCCCTAAAACCACTCAGCAAGCGCAAGGTGGAAAA
CTACAACGAGGGTCTGAAGAAGAGGGGGGTGGTGTACCTTAGCCGTGTGC
CTCCTTTCATGAAGCCGGCTAGAGTTAAACATCTCATGGAGCAGCACGGT
GTGGTCACTCGGGTAAGTTTACCTTGTCTGAACGGGGTCAACCTTGCTGC
AAGTTGCACTCTGGTACCAGTTGTACCAGCAATTAGCTACTATCTTGCAG
CAATACAATGAGCGGTTACTCGTATCATGCTCGTATGGTGTTACACTTTG
ATTATAATACAACAGTACCATGGTACTCGACAAGGATTCTATAGTATCAA
TACTTATAGATATGATAATACGAGTAGAACAGGAACATTTTGCAGGGCGA
ACACCGACAGATACAGGAGGCAGCGCTCTTGCTGTAATGCGAGTACGTGA
CCACCCACGACTGTGACTTGTCCTGACCACCCTTGAGTTCAATGTGCCGT
TCGTCTATTCTGCGGGCGTGTCCTACGAGTAGCGTCAACGCTGTTACTGT
TGTCGTACTCGTACACGTAAATTTTTCTTCGGGCGTGAAAGCTCGAATCA
AAAGGAATGAGCCTCAAGAGGAAACGCTCCCCTGGCCATCCTGAGTACTT
GCTTCGTTGTGTCGATTTACTGCGTTCAAAACAGACCTATTTCTTGGACA
GCGGATCCCATACTTACACGAGCGCGTACACCTATACGCTAAATTTATAC
TTCGAAGTATACTGCTGCCCTACAGTACTGAGTACTGAGGGTCCGTCCTA
TTAATAGCGTCCACCAAGCTTTCGAATAGATCATGACGGGGGTTTCCTTG
ATTGGGTCCCGGGTCTCGTGTGTGTTGCAGGTATACCTTGTTGAGGAAAA
TGAGGCCAACCGCCGCGCGAGGAAAAAAGCGGGTGGAAACTCTAGCAAGC
GGTACACGGAAGGCTGGATAGAGTTCGAGGATAAGAAGATGGCAAGAGGT
TGGTGGGTCTCGTTGCCGTTGCAAATATCATACTTCGTATGAGCACAAAT
GAGAATTGGCAATCACCAGACGCCGACCGCAGAGCTAAATTGCAGGGCTT
TCTACGGTGCAGTGCCGTGCGTTTTCACCTCACCTCACCGTACGATTCTA
AAGATATCAAATCCGCACCGCACCGCACCGTACGACTCTCACCAAAGTAA
AAAAAGGTGAAAAAACCAGGGGGCCTTTAAAATCAAGTAGTTTGCTACGG
TGCGGGTACGGTGCGATGCGGTTTTTAGCTTTTAGCGGTTTTAACCGAAC
CGCACCGCACCGTATGAGGCCCCATTTTATGGCGACGAATTTCACGCGAC
CGATTTGACAATTAATTGCTGGATATTCGTCACAAAATATTGGACGAGAG
AAATCGGCTGGAGTCATTTTATGGGAAAACAAGCGTCACCCGACATATTT
GACATCAAAACAACTAACGCGTCATCATACATACACATCATACGTAAGTC
ACAGCAGACATATATATGCGAGAACCAACGTCTCGAGATTCTAAACTACA
CCACAACAGTAGTACAACACACACTACAGTAAATCGAAATCAGTCAAGCG
CAACGAGATGGTGTACATTGTACTGTGTGTGGTGGACGGGGGTTCAGGCG
TGTCTGCTTATTGCGAGGCGTGGGCTTTCTTGTCAAGCGCTCTCAACAAT
CCGCTCAAAAGTCTTCGTTGTATTATGTTGTGCTGTTGTACTACTGCTAG
AAAACATGATATCATACTACTACTACTACTACTACTACTACTACTACTAC
TACTGTTTGTTGTTGTTGTCGTTGTTGTTGTTGCACTACGAGTATGAACT
ACAACAACTTCAGAAAAACAAACATCGCCACAATCTTCCGATCCGGGTGC
GCTGAAACACCGATCGATGTGCTCTCACAAGGGTCACGTACTACTGTTGT
TGTTGCACTACTGCGGTGGTGTGGTGTGGTGTATTGTGTGTTGTGCTGTG
GTGCTTGGCAGGGACTGTCGCGTTGTCAAAGTTTTGCCGCCTCATATCGG
TCAACCAGATCGGTGGGCGGATTTCGAGCTGATATTCGTCACGCTCGACG
TTTTTCGTCCTGTGACCGATTTTTTTAACAACAATAACAGCCAAATCGGT
CGCCATAAAACGACAAAACCAATATTTTTGGGCAAAAAAGAAAAAAAAAC
AAATCGGTCGCGTGATATTCGTCGCCATAAAATGGGGCCTGACATTCAAA
AATCTAGATCCGCAACACACCGCACTGTATGATTCTGCAAAAGGTAAAAC
CGCACCGCACCGCACCGCACCGTAGGATTCTGCGAAAGAAAAACCGCACC
GCGGTTCAGTTTTACACCGTAAAAAGCCCTACTGAATTGCGAGATTAATT
GTTATTTTTACTTACGAAAACATTAGCCGTGACGTCCCAAACTGGTTCGG
GGGCCAAGGGATAATCGTCAGCCTCACTGAGTAATACATCGGTCGCGCGG
AATCTATCTATTATATCGGTCCTCAGATAAGGTATAAGGGTTAGATTAAT
TGTGTCTTGCAGTCATGCATCATGCATCATGCACAATGGAGGCGTTGTCG
TCTGCAGCAGCACTGTTTAGTAGCTGTGAAGTTATATCGGTTGGCGCAAT
GCGACCGTTCGCATTATATGAAGTACATATACAGTAGTATGGATAGTGCT
GGACAGACAATAGTGTGGTATGTGGCGTGCCTGGTACATAAGAGGATATT
TTGAGTGATCGGCAAGGTAGCTGTGCATGTGAAACTGTTTTAGGTATCGG
GCGCTTTTGCAGAGATATTTTGTGTACACCACTCGGACGCGATCTCGAGA
GTGGCAAATACTATCCCCGCTTTTTTGTGGTGTACAGTATTTTAAATTCT
GTATAGCTAAGAACGCCACGCACAACGCACTGGATTCAAGTCGAAGGAGA
CGTGATACGACTTTTTGTTACTTCGTGAGGACTTCCCTCTACGTTATCAA
AGGTTTACGTTTTTCGGCGACGTCCTAACGTGTGGCTCTACTACACAACA
GTGTGTTTTCAGCTCTTCGTATCTGTGCACCAAACTCTTCGTCGACATGT
GATCGAGCCAGCGCGAGTTAATAGCGCTGTACGAGACAGACTACTACTAC
TGCTGTCCGCTCGGAGTTAATCTGAGATAGTGACAGCTGACGGCTGCACT
ACAGTAGTGTGGAGGGTTTGATTATGCCAAGCATACCCCTAAGCGTAGGG
GCCCCACGCGACTCTCTGTAATATGACAGCATACGGATCATAGCACAGGA
TGTACCTAAATATCGTTTTTTTTTGCCCCCGTTGTCCCCTACACCCGGCC
CTGCAGCTGTCGCTGAGAGCTTGAATAATACCCTCATCGGGGGCAAAAAG
CGGAATTTCTACCACGACGACATGTGGAATCTCAAGTACCTACGGAAGTT
TAAGTGGGATCACCTCACGGAGAAGGTGGCGTACGAGAGAAGGGTGCGCT
CGCAAAAGTTGCGCCTCGAGACAATGCAAGCCAAAAGGTTCGTCCACGTA
CAACGCCGGTGTATAGTAACTCTCGTGGTATGATACATTGCTTTAAACAT
GGTCGCATGACACTTCCGGGTGGGAAACTTCCCAAACACCGTCTATGCAA
CGGTAGTGATTTAGAAGAACCCGCAGCGATAGTATTATAGAGTGTAGTGT
TAATAGTACGGGAACTTTACGGGGTGACTCTGAGGACCGATCTATTCCTT
TCGGGGCACATATTGCTCGGCGTCGTGGCCGAGTCCCCGCTGGAAATTTA
GTTCGGGAAAAAAAGCGCGTGCTGTGCCTTATGAGGTGCGGTAGATAGCT
GTGGAGGATGCGCGTTTTGGTGTACATCTGAGTCGGTGATACGTGTATCA
GTAGGCTTATTGATCTGCTAGGTAGGGTACGAAGCGGTAATGTTGCTTAA
AAAATATGCTGTTGGCGCTCAGGAATTCGTACCGAGAGAAAAAATGGAGT
AGTAGCATGCGGCGACTTCTGTTGCAAGCAAAAGCGATGTCTGTCGTCTA
CCGTAACGCTTGAGGTGCAGGCCCCAAGAACTATTGTCCGCGCTATAATT
GCTCCACTTGAAACAACGATGTGGTGTTTTCGAATCCTACTATACATTTT
TCAAGAATCCTTGTCCCTTACGTCGTTTTTTTCTTTCTTTTTGTGAATTT
TTATTTTGTGTTTCACGACGATAAAAACCTTTTTCCTTACCTTTCGTAAT
TTTCAACTTCGACGCGCAACTTTGACCCAGGGAAAACGCGCGGTATTTGG
AATTGGTGGAGAGCGGGCGCTCGTTCCAAAAAATGGAAGAACGCAAACGG
AAACGGCGAGAAGACGAGGCAGGTGCCGGCGGTGCGCCAACTGCTTCGAG
CGCTGGAGGTGGTGGAGGAGGCGAGGCT
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Coding sequence (CDS) from alignment at D-herbacea_M_contig97:171033..175610+

>mRNA_D-herbacea_M_contig97.16097.1 ID=mRNA_D-herbacea_M_contig97.16097.1|Name=mRNA_D-herbacea_M_contig97.16097.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1518bp|location=Sequence derived from alignment at D-herbacea_M_contig97:171033..175610+ (Desmarestia herbacea DmunM male)
CTCGTAAGCTCGCTTGGCTATTGTCCGTGGCTGGCCAAGACTCGAGACAC
TACTGGCGCAATGGAACCTCCTTATGATGATAGCTCTGGTGATGTTGCAG
CATTGGATACCCCCGGAGTTGATACTGAAGCGGCCAACAAGGAGGCTAAG
AAGGGCATCAAGCGGCCCCTAAAACCACTCAGCAAGCGCAAGGTGGAAAA
CTACAACGAGGGTCTGAAGAAGAGGGGGGTGGTGTACCTTAGCCGTGTGC
CTCCTTTCATGAAGCCGGCTAGAGTTAAACATCTCATGGAGCAGCACGGT
GTGGTCACTCGGCTCGTAAGCTCGCTTGGCTATTGTCCGTGGCTGGCCAA
GACTCGAGACACTACTGGCGCAATGGAACCTCCTTATGATGATAGCTCTG
GTGATGTTGCAGCATTGGATACCCCCGGAGTTGATACTGAAGCGGCCAAC
AAGGAGGCTAAGAAGGGCATCAAGCGGCCCCTAAAACCACTCAGCAAGCG
CAAGGTGGAAAACTACAACGAGGGTCTGAAGAAGAGGGGGGTGGTGTACC
TTAGCCGTGTGCCTCCTTTCATGAAGCCGGCTAGAGTTAAACATCTCATG
GAGCAGCACGGTGTGGTCACTCGGGTATACCTTGTTGAGGAAAATGAGGC
CAACCGCCGCGCGAGGAAAAAAGCGGGTGGAAACTCTAGCAAGCGGTACA
CGGAAGGCTGGATAGAGTTCGAGGATAAGAAGATGGCAAGAGGTATACCT
TGTTGAGGAAAATGAGGCCAACCGCCGCGCGAGGAAAAAAGCGGGTGGAA
ACTCTAGCAAGCGGTACACGGAAGGCTGGATAGAGTTCGAGGATAAGAAG
ATGGCAAGAGCTGTCGCTGAGAGCTTGAATAATACCCTCATCGGGGGCAA
AAAGCGGAATTTCTACCACGACGACATGTGGAATCTCAAGTACCTACGGA
AGTTTAAGTGGGATCACCTCACGGAGAAGGTGGCGTACGAGAGAAGGGTG
CGCTCGCAAAAGTTGCGCCTCGAGACAATGCAAGCCAAAAGCTGTCGCTG
AGAGCTTGAATAATACCCTCATCGGGGGCAAAAAGCGGAATTTCTACCAC
GACGACATGTGGAATCTCAAGTACCTACGGAAGTTTAAGTGGGATCACCT
CACGGAGAAGGTGGCGTACGAGAGAAGGGTGCGCTCGCAAAAGTTGCGCC
TCGAGACAATGCAAGCCAAAAGGGAAAACGCGCGGTATTTGGAATTGGTG
GAGAGCGGGCGCTCGTTCCAAAAAATGGAAGAACGCAAACGGAAACGGCG
AGAAGACGAGGCAGGTGCCGGCGGTGCGCCAACTGCTTCGAGCGCTGGAG
GTGGTGGAGGAGGCGAGGCTGGAAAACGCGCGGTATTTGGAATTGGTGGA
GAGCGGGCGCTCGTTCCAAAAAATGGAAGAACGCAAACGGAAACGGCGAG
AAGACGAGGCAGGTGCCGGCGGTGCGCCAACTGCTTCGAGCGCTGGAGGT
GGTGGAGGAGGCGAGGCT
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