prot_D-herbacea_M_contig96.16050.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig96.16050.1
Unique Nameprot_D-herbacea_M_contig96.16050.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length79
Homology
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BLAST of mRNA_D-herbacea_M_contig96.16050.1 vs. uniprot
Match: A0A6H5JXC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC1_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.140e-24
Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 0 
Query:    2 TKQMLMEMVREAKAKRDFRKATEYLERVLARYPEDKQAWEELGQCYLETGNLENSLEAYRRAVALVKHDEEGGASGK 78
            T ++LME+  +A++K +F KA EYL RV+   P +KQAWEELGQCYLETG+LENSLEAYRRAVAL K  +E  ASGK
Sbjct:    3 TTKLLMEVAADARSKGNFPKAQEYLLRVVRTNPNNKQAWEELGQCYLETGSLENSLEAYRRAVALTKGSDEDSASGK 79
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BLAST of mRNA_D-herbacea_M_contig96.16050.1 vs. uniprot
Match: D8LBX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX2_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 2.410e-20
Identity = 50/82 (60.98%), Postives = 57/82 (69.51%), Query Frame = 0 
Query:    7 MEMVREAKAKRDFRK----------ATEYLERVLARYPEDKQAWEELGQCYLETGNLENSLEAYRRAVALVKHDEEGGASGK 78
            ME+  +A+AK +F K          A EYL RVL   P +KQAWEELGQCYLETG+LENSLEAYRRAVAL K  +E  ASGK
Sbjct:    1 MEVAADARAKGNFPKVSPERANVTEAQEYLLRVLRTNPNNKQAWEELGQCYLETGSLENSLEAYRRAVALTKGSDEDSASGK 82
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig96.16050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXC1_9PHAE1.140e-2464.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBX2_ECTSI2.410e-2060.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13432TPR_16coord: 10..65
e-value: 1.7E-12
score: 47.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..75
e-value: 1.8E-13
score: 52.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 16..70
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 37..70
score: 11.151
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 3..36
score: 6.402
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 3..70
score: 14.515

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig96contigD-herbacea_M_contig96:416634..417796 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig96.16050.1mRNA_D-herbacea_M_contig96.16050.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig96 416178..417900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig96.16050.1 ID=prot_D-herbacea_M_contig96.16050.1|Name=mRNA_D-herbacea_M_contig96.16050.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=79bp
MTKQMLMEMVREAKAKRDFRKATEYLERVLARYPEDKQAWEELGQCYLET
GNLENSLEAYRRAVALVKHDEEGGASGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf