prot_D-herbacea_M_contig95.16012.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-herbacea_M_contig95.16012.1
Unique Name	prot_D-herbacea_M_contig95.16012.1
Type	polypeptide
Organism	Desmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length	278

Homology

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BLAST of mRNA_D-herbacea_M_contig95.16012.1 vs. uniprot
Match: D7G443_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G443_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 8.340e-87
Identity = 129/197 (65.48%), Postives = 162/197 (82.23%), Query Frame = 0

Query:   81 VFAWSFLGFETHFTIRGRKRRFLRPFSSLAFLAFVYFLLFVMSVVTWSLGTWAVAKDIEGRTCRSTVPMLYSFSVALVAMYWIGVLFGGVALVRTIFGKQIMKGAQSSLEKTKQYAQDREKAQLMEAEQKVVERKFDALDEAGRGAIDREQVEGLIGELGMGLSSKKFKKAMADLDPDGEGVVSKENFIYWYSQHQQ 277
            VFAWSFLGFETHF+IRGRKRRFLRPFSSL+F+A +Y LLF MS+  W  GTWA+ KD  G +C + VP+LYSF VALVA+YW+GV+FG V L++ +FGK+I  GAQ+++EK KQ+AQ+R+K Q++EAEQ++V RKFDA DE G G IDR+Q E LI ELG+GLSSKK KKAM  LDP GEGVVSK++FI WY+++ Q
Sbjct:    2 VFAWSFLGFETHFSIRGRKRRFLRPFSSLSFVALLYLLLFSMSMAIWIFGTWAIVKDRVGNSCANEVPLLYSFCVALVAVYWVGVVFGAVGLIKVLFGKKIQSGAQATVEKGKQFAQNRDKEQVLEAEQQLVARKFDARDEEGNGTIDRQQAEELIEELGIGLSSKKLKKAMGQLDPAGEGVVSKQDFIEWYAENGQ 198

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BLAST of mRNA_D-herbacea_M_contig95.16012.1 vs. uniprot
Match: A0A7S4QTY2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QTY2_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.170e-5
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 0

Query:  216 FDALDEAGRGAIDREQVEGLIGELGMGLSSKKFKKAMADLDPDGEGVVSKENFIYWY 272
            FDA D +G G I  E++   +  LG+ +S    +K +A LD DG G +SKE F+ WY
Sbjct:  658 FDAFDRSGDGRISYEELRSTMSSLGVTMSENALQKVVAQLDTDGNGEISKEEFLEWY 714

The following BLAST results are available for this feature:

BLAST of mRNA_D-herbacea_M_contig95.16012.1 vs. uniprot

BLAST of mRNA_D-herbacea_M_contig95.16012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G443_ECTSI	8.340e-87	65.48	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S4QTY2_9STRA	2.170e-5	42.11	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 181..277 e-value: 2.7E-11 score: 45.1
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 174..277
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 149..173
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 67..89
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 90..108
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 48..66
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 130..148
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 109..129
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..47
None	No IPR available	TMHMM	TMhelix		coord: 151..173
None	No IPR available	TMHMM	TMhelix		coord: 66..88
None	No IPR available	TMHMM	TMhelix		coord: 24..46
None	No IPR available	TMHMM	TMhelix		coord: 109..131
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 211..273 e-value: 9.2E-8 score: 32.4
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 207..242 score: 8.627
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 243..277 score: 8.237
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 194..275

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-herbacea_M_contig95	contig	D-herbacea_M_contig95:773866..780095 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male	2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90	2022-09-16
OGS1.0 of Desmarestia herbacea DmunM male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-herbacea_M_contig95.16012.1	mRNA_D-herbacea_M_contig95.16012.1	Desmarestia herbacea DmunM male	mRNA	D-herbacea_M_contig95 773866..780095 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-herbacea_M_contig95.16012.1 ID=prot_D-herbacea_M_contig95.16012.1|Name=mRNA_D-herbacea_M_contig95.16012.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=278bp
MEEIQPPAAVLAQSSATQTKWASFVLLGPLLPSLLAVATIVVGGAIVKAD
TIDHDADISCGYPIDTFVSIAIANSYLFLAVFAWSFLGFETHFTIRGRKR
RFLRPFSSLAFLAFVYFLLFVMSVVTWSLGTWAVAKDIEGRTCRSTVPML
YSFSVALVAMYWIGVLFGGVALVRTIFGKQIMKGAQSSLEKTKQYAQDRE
KAQLMEAEQKVVERKFDALDEAGRGAIDREQVEGLIGELGMGLSSKKFKK
AMADLDPDGEGVVSKENFIYWYSQHQQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR002048	EF_hand_dom