prot_D-herbacea_M_contig94.15942.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig94.15942.1
Unique Nameprot_D-herbacea_M_contig94.15942.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length388
Homology
BLAST of mRNA_D-herbacea_M_contig94.15942.1 vs. uniprot
Match: A0A6H5KEE9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEE9_9PHAE)

HSP 1 Score: 410 bits (1055), Expect = 3.190e-139
Identity = 236/397 (59.45%), Postives = 283/397 (71.28%), Query Frame = 0
Query:    2 LELERCVKGHLESLISEIITLTEYA--GPPTTHSTQSTCWSTNTEEVNVALTVIKAAGASINDGVTRFNLVYKSTPGEAASESMAKEMGGFCQQMVSSLTVLSSVGASKAMVSYFSGGVRAVLHTFKDVVQALLDPSRHASLNSLTGMVWQACTELQRAPKTNKLACRRQMMQWSVAVKDTIDEFQEAATTAAAANDENGEGSDSHPEGAQLAGGLEGKFDG---LGLDSEGPGGA----DEFDLDDMDTNYSPPELRCVDASVGILRVFRRCLKAANDSFNTLDSAEGSKCDAADT--KGEDWLSRRLKWGGALQTCLDEANDCAGELGILLYPPLNGSDLLKRADDLERTLTAFCDAFGASEGSGGEDGGGTGQAPLRTAIEEKMGVLRAELLRM 387
            +EL   VKGHLE L  EI  L  ++  G   T+S   TCWS N+E+V+VAL VI AA  SI+DGVTR NLVYK+ P E ASESM++EMGGFCQQMV+SLT+LSSVGASK+MV+YFS GVRAVLH+ KD++ ALLDPSRHA LN LTG VWQ C ELQ+APKTNKLACRRQMMQWSVAVKDTIDEF EAA TAA AN           E A   GGL+ +F     +G   EG  GA    D+FD D MD NY   EL CV+ASV +LRVFRRCLKAANDS N+LDS E  +   A     GE WL  +L+W  ++QT LD+AN+CAGE+G+LLYPPL+G +LL RA+DLE++L AF + F A    GGE      ++PLR A+ EK+GVLRA L ++
Sbjct:    1 MELNGAVKGHLEGLGKEIDALIGHSMYGKGGTYS--PTCWSKNSEDVDVALRVIGAASQSIHDGVTRLNLVYKANPSEVASESMSREMGGFCQQMVASLTLLSSVGASKSMVTYFSAGVRAVLHSVKDLIGALLDPSRHARLNGLTGTVWQTCKELQQAPKTNKLACRRQMMQWSVAVKDTIDEFVEAAKTAAMANA-------GKSESAGDKGGLDEQFAAKVTVGGAGEGEVGAEGTFDDFDFDGMDENYGAAELSCVEASVDVLRVFRRCLKAANDSLNSLDSPEPQEESGATAGPAGEGWLQGKLEWAKSVQTHLDDANECAGEVGVLLYPPLDGGELLGRANDLEKSLAAFFEVFSA----GGEGTNSEMESPLRKAVVEKLGVLRAALEKL 384          
BLAST of mRNA_D-herbacea_M_contig94.15942.1 vs. uniprot
Match: A0A836CN71_9STRA (Grap2 and cyclin-D-interacting-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN71_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.230e-31
Identity = 105/329 (31.91%), Postives = 158/329 (48.02%), Query Frame = 0
Query:   39 WSTNTEEVNVALTVIKAAGASINDGVTRFNLVYKSTPGEAASESMAKEMGGFCQQMVSSLTVLSSV--GASKAMVSYFSGGVRAVLHTFKDVVQALL-DPSRHASLNSLTGMVWQACTELQRAPKTNKLACRRQMMQWSVAVKDTIDEFQEAATTAAAANDENGEGSDSHPEGAQLAGGLEGKFD--GLGLDSEGPGGADEFD--LDDMDTN------YSPPELRCVDASVGILRVFRRCLKAANDSFNTLDSAEGSKCDAADTKGEDWLSRRLKWGGALQTCLDEANDCAGELGILLYPPLNGSDLLKRADDLERTLTAFCDAFGASE 354
            W+T ++ + VAL+V+  A  SI+   TRF L++K+ P    +  M  EMG     + SSL V  +   G S ++     G VRAV     ++V+++   PS     N LTG +W+AC  +   P TNKLA R Q+M  S+++KDTIDEF+ A   A AA+     G         ++G  + +    G   DS      D FD  +D MD         SP E     A V +LR  R C+K AND+   + +A GS       +G       + W G L   +    +  G++G+ LYPP+ G+ ++  AD     +TA  D   A++
Sbjct:   43 WATPSDSLKVALSVMLTAANSISGSSTRFTLLFKTAPPPEITAGMVNEMGSLSDHLASSLAVALAPEQGVSPSLAVAIIGAVRAVQVALLELVKSVAAGPSTEPEWNHLTGALWEACKGVAEVPTTNKLAVRMQLMCVSMSIKDTIDEFKAALEAAEAADG----GLSGEVSALSISGSADNQSHEPGKTADSARDEAVDSFDDLVDYMDGEGADEDAMSPAEAEAAAAVVELLRTSRACIKTANDA---MAAATGSGA----ARGV------MAWAGPLCEEVQSLAEQVGDVGMALYPPMEGAAVVAAADGFGARVTACLDKVDAAQ 354          
BLAST of mRNA_D-herbacea_M_contig94.15942.1 vs. uniprot
Match: A0A7S3H5N5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5N5_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.510e-9
Identity = 79/324 (24.38%), Postives = 137/324 (42.28%), Query Frame = 0
Query:   44 EEVNVALTVIKAAGASINDGVTRFNLVYKSTPGEAASESMAKEMGGFCQQMVSSLTVLSSVGASKAMVSYFSGGVRAVLHTFKDVVQALLDPSRHASLNSLTGMVWQACTELQRAPKTNKLACRRQMMQWSVAVKDTIDEFQEAATTAAAANDENGEGSDSHPEGAQLAGGLEGKFDGLGLDSEGPGGADEFDLDD--------------MDTNYSPPELRCVDASVGILRVFRRCLKAANDSFNTLDSA---EGSKCDAADTKGEDWLSRRLKWGGALQTCLDEANDCAGELGILLYPPLNGSDLLKRADDLERTLTAFCDAF 350
            E +  ++T++K     +++G  +  L+ K+ P   A  S+  E+    + + +          +  +    +  VR +L   +D ++AL   S   SLN + GMV +    +++ P +NK A R   MQ  + VK+T+ EF+     A    ++    ++  PE + L G        + L ++GP  A++ D D                + +Y+P E+R V+ASV +L     C+K       T+  A     +   A D   E       +W   L       N  A +LG  LYPP   SDL K   + +  L + C A+
Sbjct:   52 ESLRNSITILKDIAKVLSNGCIKLILLMKAKPSNDALASLLSELSNHAKLLTAHYFKFLENSVADCLFDSVTRAVRTLLSHIQDFLRALQSGSTD-SLNYMVGMVTKIVDAMEKIPLSNKQAYRTLFMQNCILVKETLQEFKAYLDEA---REKRARQAEELPE-SVLTG-----VANIALSAQGPVVAEDVDGDSEQXXXXXXXXXXXXXELDYTPEEVRVVEASVVLLGKTVSCIKHTLFIATTVCDAIIAPTNASTATDATEEGAEKHSQQWVAQLAHLTQLLNKDALDLGAELYPPFE-SDLTKINANFDN-LRSHCLAY 363          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig94.15942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KEE9_9PHAE3.190e-13959.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CN71_9STRA2.230e-3131.91Grap2 and cyclin-D-interacting-domain-containing p... [more]
A0A7S3H5N5_9STRA1.510e-924.38Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13324GCIPcoord: 56..343
e-value: 2.4E-20
score: 73.3
NoneNo IPR availablePANTHERPTHR15492:SF1CYCLIN-D1-BINDING PROTEIN 1coord: 12..355
IPR026907Cyclin-D1-binding protein 1PANTHERPTHR15492CYCLIN D1-BINDING PROTEIN 1coord: 12..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig94contigD-herbacea_M_contig94:450638..461443 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig94.15942.1mRNA_D-herbacea_M_contig94.15942.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig94 450609..461722 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig94.15942.1 ID=prot_D-herbacea_M_contig94.15942.1|Name=mRNA_D-herbacea_M_contig94.15942.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=388bp
MLELERCVKGHLESLISEIITLTEYAGPPTTHSTQSTCWSTNTEEVNVAL
TVIKAAGASINDGVTRFNLVYKSTPGEAASESMAKEMGGFCQQMVSSLTV
LSSVGASKAMVSYFSGGVRAVLHTFKDVVQALLDPSRHASLNSLTGMVWQ
ACTELQRAPKTNKLACRRQMMQWSVAVKDTIDEFQEAATTAAAANDENGE
GSDSHPEGAQLAGGLEGKFDGLGLDSEGPGGADEFDLDDMDTNYSPPELR
CVDASVGILRVFRRCLKAANDSFNTLDSAEGSKCDAADTKGEDWLSRRLK
WGGALQTCLDEANDCAGELGILLYPPLNGSDLLKRADDLERTLTAFCDAF
GASEGSGGEDGGGTGQAPLRTAIEEKMGVLRAELLRM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026907CCNDBP1