prot_D-herbacea_M_contig93.15908.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig93.15908.1
Unique Nameprot_D-herbacea_M_contig93.15908.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length479
Homology
BLAST of mRNA_D-herbacea_M_contig93.15908.1 vs. uniprot
Match: D8LMH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH3_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 1.120e-20
Identity = 134/409 (32.76%), Postives = 174/409 (42.54%), Query Frame = 0
Query:   92 EAPRALSRVNSGDWAQCNGQMDGEKPLLDA---LQWPLRPIAAQAPRPEEAPG----GKDEDVVFVDHEHRNGAVVAGASLSPVMKQAKAAQSVGLEWPLLDGD-----------------VEAKVGEDD-----IAKDDGGEKSSADT-AGDDMASSDFLNIPAGRSVPQPKRVHFAALFKKRSRLRLADGQGGGGIEQDPQFQLDS-GARGGAATIPA-YRRMEQNHKANADAVANAAMAAVKMAAHDERDGGLQAMVDNS----RGGQIDLAAEGMLRLHVAPA--AKRRCGKVAAMEEYXXXXXXXXXXXXXXXNKGSAAPAGAAAGAXXXXXXXXXSVGVDGEAKKAEPIVDVTAAAAPPPVPQSKEDRSEMVTRALKKYSFYQCHSCRKPYFGGLVSCEPAAP 462
            + PR L     G  A  +   D E   LD    L WP R   A++PRP   P     G D D   +D E   G  V  + L+                                       VE K    D     IA  D G+K+      G   + +DF+    G     P+RVHF A           D   G G+ +   ++ +S G   GA    A + R EQ  K  A AVA+A MAA  +       GG+  + +N      G ++DLAA GMLRLHV+PA  A+ R  +VAA                     G++  +  A   XXXXXXXX     +G+   A    D  A     P   +KE+R+++V RALKKYS+YQCHSCRKPYFGGLVSCEPA P
Sbjct:   64 DEPRKLESKGGGAGADNDKVDDDEGLALDVVGILPWPER---ARSPRPRHKPTWLDEGDDGDDEALDMEEEEGVFVVPSPLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLEEVVKVEEKPKRKDGIAPNIAAVDLGDKARTKVNRGKKRSVADFVADRGGIREASPRRVHFGA----------GDFSVGLGLARRVGYRPESIGGEWGALERGAGFSRKEQEEKEAAGAVADAVMAAGAVGG-----GGVDRLAENKDDQRAGERVDLAAAGMLRLHVSPAPIARDRNARVAAAAT---------AAMRRMAGDGASVQSSNAPXXXXXXXXXXADSAKEGKGSGASAAGDDDAVK---PAELTKEERAKLVKRALKKYSYYQCHSCRKPYFGGLVSCEPAPP 442          
BLAST of mRNA_D-herbacea_M_contig93.15908.1 vs. uniprot
Match: A0A6H5JCA5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCA5_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 6.970e-17
Identity = 113/253 (44.66%), Postives = 135/253 (53.36%), Query Frame = 0
Query:  220 DFLNIPAGRSVPQPKRVHFAALFKKRSRLRLADGQGGGGIEQDPQFQLDS-GARGGAATIPA-YRRMEQNHKANADAVANAAMAAVKMAAHDERDGGLQAMVDNS----RGGQIDLAAEGMLRLHVAPAAKRRC--GKVAAMEEYXXXXXXXXXXXXXXXNKGSAAPAGAAAGAXXXXXXXXXSVGV-DGEAKKAEPIVDVTAAAAPPPVPQSKEDRSEMVTRALKKYSFYQCHSCRKPYFGGLVSCEPAAPP 463
            DF+    G     PKRVHF A           D   G G+ +   ++  S G   GA    A + R EQ  K  A AVA+A MAA  +       GG+  + +N        ++DLAA GMLRLHV+PAA+ R    +VAA    XXXXXXXXXXXXXXX              XXXXXXXXX     D +A K   +              SKE+R ++V RALKKYS+YQCHSCRKPYFGGLVSCEPAAPP
Sbjct: 1193 DFVVDRGGIREASPKRVHFGA----------GDFSVGLGLARRVGYRPKSIGGEWGALERGAGFSRNEQEEKEAAGAVADAVMAAGAVGG-----GGVDRLAENEDDQREEKRVDLAAAGMLRLHVSPAARARDRNARVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDAVKLGEL--------------SKEERVKLVKRALKKYSYYQCHSCRKPYFGGLVSCEPAAPP 1416          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig93.15908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMH3_ECTSI1.120e-2032.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCA5_9PHAE6.970e-1744.66RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig93contigD-herbacea_M_contig93:656217..657836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig93.15908.1mRNA_D-herbacea_M_contig93.15908.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig93 656217..657865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig93.15908.1 ID=prot_D-herbacea_M_contig93.15908.1|Name=mRNA_D-herbacea_M_contig93.15908.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=479bp
MGRWGWGAGRWWGSAARHPVDDQQHHKHSARALVAKEEDSCEDKKRRGGF
AIANGEEDAIDAGKKKRAKTDVERGPDGVGVEVVDGKRPTLEAPRALSRV
NSGDWAQCNGQMDGEKPLLDALQWPLRPIAAQAPRPEEAPGGKDEDVVFV
DHEHRNGAVVAGASLSPVMKQAKAAQSVGLEWPLLDGDVEAKVGEDDIAK
DDGGEKSSADTAGDDMASSDFLNIPAGRSVPQPKRVHFAALFKKRSRLRL
ADGQGGGGIEQDPQFQLDSGARGGAATIPAYRRMEQNHKANADAVANAAM
AAVKMAAHDERDGGLQAMVDNSRGGQIDLAAEGMLRLHVAPAAKRRCGKV
AAMEEYPAAKRRRGKVATLEENKGSAAPAGAAAGAPSDVAAGSPSVGVDG
EAKKAEPIVDVTAAAAPPPVPQSKEDRSEMVTRALKKYSFYQCHSCRKPY
FGGLVSCEPAAPPGASGVSGVGAAGAAGG
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