prot_D-herbacea_M_contig93.15905.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig93.15905.1
Unique Nameprot_D-herbacea_M_contig93.15905.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length806
Homology
BLAST of mRNA_D-herbacea_M_contig93.15905.1 vs. uniprot
Match: D8LMH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMH1_ECTSI)

HSP 1 Score: 472 bits (1215), Expect = 2.680e-153
Identity = 283/588 (48.13%), Postives = 352/588 (59.86%), Query Frame = 0
Query:  124 TITVKLHDKTRVGEDYQATIVPRLRTCTAEATREDLKIAPAEEHLLWDSSRAPDEGRLQQLIKRLHIGVMKGNTMQPISLLTHADVMTALHRCMYDPVSAEASLTALERRRQSTYNAASV-----------GDSAA-------GGKNASKSGSKAGTLGSAGG---GSNEGEGNRWEDWSAKDRAAFLTHLGEKHKDLSGVVAEFPTKTHAGVIEFYYNWKNHEPDYSRWQCTKRQIDIMLTHPDFHQEICEACEEGGELLLCDTCSLAFHLHCLSPPLEEPPENDWSCPQCVLKHRTPESRAKAKVFVKQKIISIEQERRCMAKEEEHRHERQAMYGYLGQANAGIGHSNKRGVGAIAPSPERTQDKALADEEQKAEAARELNNRVWRREDLAALQRAVNEFGECGWRAIMSHKEYKNLFYMRSPPIVKSMYRLQKDSDLKRAKMRARMAARADTKAXXXXXSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGIGLVNEPKTAREWKAMLQKAVLEHGVGGWQATLETPEYSQLRELGGPSTLANHWRSMRHRLRRRLEK 690
            TI VKLHDKTR+G+ YQA  +P LR  TAEA +EDLKIAP ++HLLWDSSRAPDE RLQQL+KRL IG  + +  +P SLLTHADV+ ALHRC YDP SAEASL  L+RRR++ + +AS            GD +A           A KS ++  ++   G    G ++  GNRWEDWS  DRA FL HLG+KHKD++ V  EF TK+H  VIEFYYNWK HEPDYSRWQ  KRQIDI L                                                             A+AK+FVKQ+I+SIE+ERRCMA+EEE RHERQA+YGYLGQA+AGI H +KRG GA A + E  + + +  EE +A+A REL+NR W +EDLA LQRAV+EFGE GWRA+M+++++K+LF+MRSP IVKSM+R+ KD++LKRAK RARMAARADTKA XX  + A                                                      G G  ++   ARE +A+LQK ++EHGVGG +  L+ P YS L+E G  S L NHWRSM+HRLRRRLE+
Sbjct:   65 TIAVKLHDKTRIGDSYQAVTIPGLRARTAEAKQEDLKIAPEKDHLLWDSSRAPDERRLQQLVKRLRIGSGRDDGGRPTSLLTHADVVAALHRCKYDPASAEASLVGLQRRRETKHKSASASGDARKLQHSRGDVSAEAATSPEDSATAQKSSNQISSIAPGGEPCTGKSDVGGNRWEDWSEADRATFLVHLGDKHKDMNDVAEEFATKSHGDVIEFYYNWKFHEPDYSRWQLMKRQIDIAL-------------------------------------------------------------ARAKLFVKQRIVSIEEERRCMAQEEERRHERQALYGYLGQASAGIEHGHKRGGGASASNAENRRQRIMGHEEAEAQAERELSNRPWAKEDLAQLQRAVDEFGERGWRAMMANEKHKSLFHMRSPFIVKSMHRMLKDNELKRAKARARMAARADTKAKXXGDAIAGADGDPAKDFCREAVSFAEADAAAAAVAMARTEAHESVDNPGEEAG--------GAGTFDDKSRARERRALLQKLIMEHGVGGVKTKLDMPVYSALKEEGSQSVLINHWRSMQHRLRRRLER 583          
BLAST of mRNA_D-herbacea_M_contig93.15905.1 vs. uniprot
Match: A0A7S1C3G3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3G3_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.610e-18
Identity = 49/115 (42.61%), Postives = 67/115 (58.26%), Query Frame = 0
Query:  281 WSAKDRAAFLTHLGEKHKDLSGVVAEFPTKTHAGVIEFYYN-WKNHEPDYSRWQCTKRQIDIMLTHPDFHQEICEACEEGGELLLCDTCSLAFHLHCLSPPLEEPPENDWSCPQC 394
            WSA + A F   LG   K    V  + P +T    +E++Y  WK   P +S+W   KR +   L   +FH ++C  C  GG+LL CD+CSLAFH+ CL PPL + PE DW+CP+C
Sbjct:   62 WSAAESALFELGLGRYGKFFGLVAMDIPHRTARECVEYFYGVWKK-LPRHSQW---KRGLGRSL---EFHDDVCAVCGSGGDLLCCDSCSLAFHVSCLRPPLFDLPEEDWACPRC 169          
BLAST of mRNA_D-herbacea_M_contig93.15905.1 vs. uniprot
Match: A0A7D9J5R6_PARCT (Chromodomain-helicase-DNA-binding 4-like isoform X3 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9J5R6_PARCT)

HSP 1 Score: 87.8 bits (216), Expect = 5.700e-15
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
Query:  347 DFHQEICEACEEGGELLLCDTCSLAFHLHCLSPPLEEPPENDWSCPQC 394
            D HQ+ CE CEE GELLLCDTC+L+FHL CL PPL+E PE +WSCP+C
Sbjct:  291 DQHQDYCEVCEESGELLLCDTCTLSFHLQCLDPPLDEAPEGEWSCPKC 338          
BLAST of mRNA_D-herbacea_M_contig93.15905.1 vs. uniprot
Match: UPI000852357D (chromodomain-helicase-DNA-binding protein Mi-2 homolog n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=UPI000852357D)

HSP 1 Score: 79.3 bits (194), Expect = 2.100e-14
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0
Query:  331 RWQCTK---RQIDIMLTHPDFHQEICEACEEGGELLLCDTCSLAFHLHCLSPPLEEPPENDWSCPQC 394
            +W C       I       D H E C  C++GGELL CD+C+ A+H HCL+PPL E P++DW CP+C
Sbjct:    8 KWSCAHCGGEGIAGAAEDDDEHMEFCRVCKDGGELLCCDSCTSAYHTHCLNPPLSEIPDDDWKCPRC 74          
BLAST of mRNA_D-herbacea_M_contig93.15905.1 vs. uniprot
Match: A0A6S7JFV3_PARCT (Chromodomain-helicase-DNA-binding 4-like isoform X3 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JFV3_PARCT)

HSP 1 Score: 87.8 bits (216), Expect = 4.390e-14
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
Query:  347 DFHQEICEACEEGGELLLCDTCSLAFHLHCLSPPLEEPPENDWSCPQC 394
            D HQ+ CE CEE GELLLCDTC+L+FHL CL PPL+E PE +WSCP+C
Sbjct:   28 DQHQDYCEVCEESGELLLCDTCTLSFHLQCLDPPLDEAPEGEWSCPKC 75          
BLAST of mRNA_D-herbacea_M_contig93.15905.1 vs. uniprot
Match: UPI00106CCECF (chromodomain-helicase-DNA-binding protein 4-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CCECF)

HSP 1 Score: 87.8 bits (216), Expect = 6.490e-14
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
Query:  347 DFHQEICEACEEGGELLLCDTCSLAFHLHCLSPPLEEPPENDWSCPQC 394
            D HQ+ CE CEE GELLLCDTC+L+FHL CL PPL+E PE +WSCP+C
Sbjct:  306 DQHQDYCEVCEESGELLLCDTCTLSFHLQCLDPPLDEAPEGEWSCPKC 353          
BLAST of mRNA_D-herbacea_M_contig93.15905.1 vs. uniprot
Match: UPI001CF5083C (chromodomain-helicase-DNA-binding protein 4-like isoform X4 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF5083C)

HSP 1 Score: 87.8 bits (216), Expect = 6.720e-14
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0
Query:  340 DIMLTHPDFHQEICEACEEGGELLLCDTCSLAFHLHCLSPPLEEPPENDWSCPQC 394
            D  +   D HQ+ CE CEEGG LLLCDTC+L+FHL CL PPL+EPP+  WSCP C
Sbjct:  336 DYNVVSVDEHQDYCEECEEGGGLLLCDTCTLSFHLRCLDPPLDEPPQGRWSCPVC 390          
BLAST of mRNA_D-herbacea_M_contig93.15905.1 vs. uniprot
Match: A0A2B4SC18_STYPI (Chromodomain-helicase-DNA-binding protein 5 n=5 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SC18_STYPI)

HSP 1 Score: 87.8 bits (216), Expect = 6.720e-14
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
Query:  347 DFHQEICEACEEGGELLLCDTCSLAFHLHCLSPPLEEPPENDWSCPQC 394
            D HQ+ CE CEEGG+LLLCDTC+L+FHL CL PPL+EPP+  WSCP C
Sbjct:  351 DEHQDYCEECEEGGDLLLCDTCTLSFHLRCLDPPLDEPPQGRWSCPVC 398          
BLAST of mRNA_D-herbacea_M_contig93.15905.1 vs. uniprot
Match: UPI0009E1EC82 (chromodomain-helicase-DNA-binding protein 5-like isoform X1 n=3 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1EC82)

HSP 1 Score: 87.8 bits (216), Expect = 6.730e-14
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
Query:  347 DFHQEICEACEEGGELLLCDTCSLAFHLHCLSPPLEEPPENDWSCPQC 394
            D HQ+ CE CEEGG+LLLCDTC+L+FHL CL PPL+EPP+  WSCP C
Sbjct:  347 DEHQDYCEECEEGGDLLLCDTCTLSFHLRCLDPPLDEPPQGRWSCPVC 394          
BLAST of mRNA_D-herbacea_M_contig93.15905.1 vs. uniprot
Match: UPI001CF5D2A9 (chromodomain-helicase-DNA-binding protein 4-like isoform X1 n=3 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF5D2A9)

HSP 1 Score: 87.8 bits (216), Expect = 6.760e-14
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0
Query:  340 DIMLTHPDFHQEICEACEEGGELLLCDTCSLAFHLHCLSPPLEEPPENDWSCPQC 394
            D  +   D HQ+ CE CEEGG LLLCDTC+L+FHL CL PPL+EPP+  WSCP C
Sbjct:  336 DYNVVSVDEHQDYCEECEEGGGLLLCDTCTLSFHLRCLDPPLDEPPQGRWSCPVC 390          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig93.15905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMH1_ECTSI2.680e-15348.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1C3G3_9STRA2.610e-1842.61Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7D9J5R6_PARCT5.700e-1570.83Chromodomain-helicase-DNA-binding 4-like isoform X... [more]
UPI000852357D2.100e-1446.27chromodomain-helicase-DNA-binding protein Mi-2 hom... [more]
A0A6S7JFV3_PARCT4.390e-1470.83Chromodomain-helicase-DNA-binding 4-like isoform X... [more]
UPI00106CCECF6.490e-1470.83chromodomain-helicase-DNA-binding protein 4-like n... [more]
UPI001CF5083C6.720e-1463.64chromodomain-helicase-DNA-binding protein 4-like i... [more]
A0A2B4SC18_STYPI6.720e-1470.83Chromodomain-helicase-DNA-binding protein 5 n=5 Ta... [more]
UPI0009E1EC826.730e-1470.83chromodomain-helicase-DNA-binding protein 5-like i... [more]
UPI001CF5D2A96.760e-1463.64chromodomain-helicase-DNA-binding protein 4-like i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 352..395
e-value: 2.7E-12
score: 56.8
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 352..395
e-value: 1.7E-10
score: 40.6
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 350..397
score: 10.38
NoneNo IPR availableGENE3D1.10.10.60coord: 272..338
e-value: 7.4E-8
score: 34.1
NoneNo IPR availablePANTHERPTHR24102:SF28coord: 347..407
NoneNo IPR availablePANTHERPTHR24102PHD FINGER PROTEINcoord: 347..407
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 346..416
e-value: 4.9E-18
score: 66.5
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 353..394
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 347..404

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig93contigD-herbacea_M_contig93:622719..629625 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig93.15905.1mRNA_D-herbacea_M_contig93.15905.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig93 622427..630198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig93.15905.1 ID=prot_D-herbacea_M_contig93.15905.1|Name=mRNA_D-herbacea_M_contig93.15905.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=806bp
MHKVNSSGRYIGKGKGNAAAKGSASSKEKAAKGSDMGGDSSKAVDQPMPE
DMKSGVDSNGNGLVVQHRQDDSDESRRGCTEGESSDNEAYGDAVNAESPS
GEQRRRGHSVINEGQIRAADPQVTITVKLHDKTRVGEDYQATIVPRLRTC
TAEATREDLKIAPAEEHLLWDSSRAPDEGRLQQLIKRLHIGVMKGNTMQP
ISLLTHADVMTALHRCMYDPVSAEASLTALERRRQSTYNAASVGDSAAGG
KNASKSGSKAGTLGSAGGGSNEGEGNRWEDWSAKDRAAFLTHLGEKHKDL
SGVVAEFPTKTHAGVIEFYYNWKNHEPDYSRWQCTKRQIDIMLTHPDFHQ
EICEACEEGGELLLCDTCSLAFHLHCLSPPLEEPPENDWSCPQCVLKHRT
PESRAKAKVFVKQKIISIEQERRCMAKEEEHRHERQAMYGYLGQANAGIG
HSNKRGVGAIAPSPERTQDKALADEEQKAEAARELNNRVWRREDLAALQR
AVNEFGECGWRAIMSHKEYKNLFYMRSPPIVKSMYRLQKDSDLKRAKMRA
RMAARADTKAKARVESGATPTPSPRLKPDGDVKEDKESLAAAEAEAAAVA
IAEARTEAHESVEYEEEESGGTGIGLVNEPKTAREWKAMLQKAVLEHGVG
GWQATLETPEYSQLRELGGPSTLANHWRSMRHRLRRRLEKQQVTTAKSAR
TARTAKSTALKGSMRPQGVSNGTLVAPMLSACSSGVLEATAKQVGGGNES
TTYGPRGTRPDAEGVTRRGEEDLMVIDIGSDDAGERNSKRTRTKETVEPA
KRDCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019786Zinc_finger_PHD-type_CS
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR001965Znf_PHD