prot_D-herbacea_M_contig93.15902.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig93.15902.1
Unique Nameprot_D-herbacea_M_contig93.15902.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length263
Homology
BLAST of mRNA_D-herbacea_M_contig93.15902.1 vs. uniprot
Match: D8LNF0_ECTSI (LRAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF0_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 7.350e-55
Identity = 111/199 (55.78%), Postives = 125/199 (62.81%), Query Frame = 0
Query:   65 QERQAAGETEGKEDADALPKKGKQLRGHAIQERELSPGDHIYVYRVAIQHHGIVTHVPWGQQASGKSAESCASPQSPSRGVQVVHLSSASRGVESISLENFLKGGLLHRATYKVSTIERGLDIGASYGRTSDDPAGIVARATEAAKTSKDASDQWDGYGLLTKNSETFAYWCCTGRQEKISRQAVRGLVGASIVVAGAS 263
            +E + AG  EG  DA     +G+ L GHA+ E ELS GD +YVYR  IQHHGIVTHVP   +A G               V+VVH  S   GVES SLE FL GG L RATY  S    GLD GASYG  +DDPA IV RATEAAK  + AS  W GY L T N ETFAYWC TGR++ +SRQA RGLVGA +V AGAS
Sbjct:   73 EEERTAGGPEG--DAPVAATEGETLWGHAVHEHELSAGDQVYVYRGVIQHHGIVTHVPVPGRAGG---------------VRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCATDDPALIVTRATEAAKFGEGASG-WSGYNLCTNNCETFAYWCSTGRRQVLSRQAARGLVGAGVVAAGAS 253          
BLAST of mRNA_D-herbacea_M_contig93.15902.1 vs. uniprot
Match: A0A6H5JNU1_9PHAE (LRAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU1_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 2.690e-53
Identity = 110/198 (55.56%), Postives = 122/198 (61.62%), Query Frame = 0
Query:   66 ERQAAGETEGKEDADALPKKGKQLRGHAIQERELSPGDHIYVYRVAIQHHGIVTHVPWGQQASGKSAESCASPQSPSRGVQVVHLSSASRGVESISLENFLKGGLLHRATYKVSTIERGLDIGASYGRTSDDPAGIVARATEAAKTSKDASDQWDGYGLLTKNSETFAYWCCTGRQEKISRQAVRGLVGASIVVAGAS 263
            E +AAG   G  DA     +G+ L GHA+ E EL  GD IYVYR  IQHHGIVTHVP   +  G               V+VVH  S   GVES SLE FL GG L RATY  S    GLD GASYG  +DDPA IV RATEAAK  + AS  W GY L T N ETFAYWC TGR++ +SRQA RGLVGA +V AGAS
Sbjct:   90 EERAAGGPAG--DAPVAAAEGETLWGHAVHEHELCAGDQIYVYRGVIQHHGIVTHVPVPGRVGG---------------VRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASG-WSGYNLCTNNCETFAYWCSTGRRQVLSRQATRGLVGAGVVAAGAS 269          
BLAST of mRNA_D-herbacea_M_contig93.15902.1 vs. uniprot
Match: UPI0005C342C3 (uncharacterized protein LOC105316360 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI0005C342C3)

HSP 1 Score: 53.1 bits (126), Expect = 8.620e-5
Identity = 49/174 (28.16%), Postives = 74/174 (42.53%), Query Frame = 0
Query:   92 HAIQERELSPGDHIYVYRVAI---QHHGIVTHVPWGQ---------QASGKSAESCAS-------------PQSPSRGVQVVHLSSASRGVESISLENFLKGGLLHRATYKVSTIERGLDIGASYGRTSDDPAGIVARATEAAKTSKDASDQWDGYGLLTKNSETFAYWCCTGR 240
            HAI  ++L PGDHIY +R A+    HHGI    P  +            G S++S                P+   R  ++      S  ++S +L NF  G  L    Y  S  +    + +S+   +  P+  V    + AK  +D  ++W+ Y L   N ETFA +C TGR
Sbjct:   18 HAIDVKDLKPGDHIYCHRSALFFYSHHGIYVGEPDCEVIHFSGIPDSKIGSSSDSSLDDETKLLLQELQTLPKDSERAKEIEKKLKIS--IKSTTLANFQSGSTLRLVAYSCSGTKHFFAVVSSHYVKAMPPSETV----KLAKHFRDHPEKWNEYHLQYNNCETFATFCKTGR 185          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig93.15902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LNF0_ECTSI7.350e-5555.78LRAT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JNU1_9PHAE2.690e-5355.56LRAT domain-containing protein n=1 Tax=Ectocarpus ... [more]
UPI0005C342C38.620e-528.16uncharacterized protein LOC105316360 n=1 Tax=Amphi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..66
NoneNo IPR availablePANTHERPTHR46137FAMILY NOT NAMEDcoord: 92..254
IPR007053LRAT domainPFAMPF04970LRATcoord: 99..241
e-value: 4.6E-11
score: 43.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig93contigD-herbacea_M_contig93:461602..463956 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig93.15902.1mRNA_D-herbacea_M_contig93.15902.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig93 461602..466614 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig93.15902.1 ID=prot_D-herbacea_M_contig93.15902.1|Name=mRNA_D-herbacea_M_contig93.15902.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=263bp
MAEQKVKVGKAKLGKFTGALYGAAQRAAADGRVSAQRAAADGYEAAQRAT
ADGKKYLNEVAKARQERQAAGETEGKEDADALPKKGKQLRGHAIQERELS
PGDHIYVYRVAIQHHGIVTHVPWGQQASGKSAESCASPQSPSRGVQVVHL
SSASRGVESISLENFLKGGLLHRATYKVSTIERGLDIGASYGRTSDDPAG
IVARATEAAKTSKDASDQWDGYGLLTKNSETFAYWCCTGRQEKISRQAVR
GLVGASIVVAGAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007053LRAT_dom