prot_D-herbacea_M_contig9.15709.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig9.15709.1
Unique Nameprot_D-herbacea_M_contig9.15709.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length1074
Homology
BLAST of mRNA_D-herbacea_M_contig9.15709.1 vs. uniprot
Match: A0A6H5JT44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JT44_9PHAE)

HSP 1 Score: 782 bits (2019), Expect = 4.170e-265
Identity = 564/996 (56.63%), Postives = 678/996 (68.07%), Query Frame = 0
Query:  112 AHRLRTLQQLLPGLDASLLISKSPRLLGVDSQRLKRIIPARLAVMQSLLGPXXXXXXXXXXNPDLLLYDVKKTLGPRIVFLQSLFPESPKLLMRAPALLYHDAEMYLLPKMAELGLLLPGVDVLRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKFRQLQDLFPEGDVVSMVERDATVLFYDFDKSINVKVDCWRERVSNVTELDCLIQAYPVLLSYSLDTSVSRLDFLIQTNGTEMTATKLRQVVQTARRDWDATYGDTYRKFLERKVEGPSVLRLWPGLYFDSDTKDA-GSGGNRMEGDGLKVQIQDDGSVKTSGPTATALKATAAHLKSLEKQYGTNIKEAQLRFSSALRDGKYGSHPTEMDMIMYDIKSFDQQVRKLATGKRMKRFRELLPGLNPDKLFTEYPQVVMMDLKKVEERVQGLRQLLVGADVSGAVSIAPHLLLSDVQTCLRPRMTRLVVAMS-VKQLQGVLDADKVKAMVVRCPELXXXDVRNVVVPSLQYMLRCTTDHDELGKRLFRDPSLLTVGAGPLARLQYTLEQHRNGTANISLGTLDASVANVGGTNDA--------SGDSEGAVDGTGTYE---------------PDASRLLPPVVVPQILKCQLRDFVERNPGYVSFLAQRQGLAEAGSAVSAEGIHRGGQQHQQQHXXQQSEDSLLTDHGFDQSGQVVFWERSVGARLSEMFRPVDSPYAREKMKEA--GGKGPDGQRGEPLSELDLLVGDVLYFNHRMGVLFRSKIQVGMPQTVDLRQEVAKLEEDVEWGSRQIRRLLGLGSWTEKGVPESSEARPSKAELEKEPASDXXXXXXXXXXXXXXXXXXXXXXXXHHSKRTWVMETFKSLWDNNASGRSGEAGV----PALDKAVVEGGGSSLETAQELERLLGEVSSYEGRLEGLLDM----PVKADEEDALADD 1072
            A R++TL++LLPGL+A  L+S++P LLG  S +                  XXXXXXXXXX   LL ++   TL PRI F++ LFPESP+LL RAP LL HD E +L+PK+ +L  LLPG+DVL++VR                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKF+QLQDLFP+ +VVSMVE DATVL YD+  S+ VKVDCWRERVSN TEL+ LIQ YP+LLSYSLDTSVSRLDFLI+T G +     +R  V+ A+RDW A +G  YRKFLERKVEGPSVLRLWPGLYFDSDT    GSGG  ++G+G+  ++QDDGSV+ S  +A  +K  +A++K+LE++YG  IKE QLRF+ A+R GK G +P+E+DMI+YDIKSFDQQVRKLATG R+KRF+ELLPGL+ + LFTEYP V++MDLKKVE++V+ LR+LL G  V+G VS+AP LLL+DVQTCLRPRMTRLV A++ VKQ QG                 XXX      VPSLQYML+ T+DHDEL  RLFRDPSLL VG GPLARLQYTLEQHRNG+A+I+LG L A V        +        +G  + A  GT +                  D SRLLPPV+VPQILKCQ+RDF+ RNP YVSFLAQRQGL  +  + S EG                           DQS  V FWER+VG RLSEMFRPVDSPYARE M+EA   GKGPDGQ+  PLSELD+L+GDVL+FN RM VL  SKIQ  MPQTVD+ +E  KL EDV+WGSRQI+RLLGLGSWTE+ V  +  +    AE+  + A+D                           KR WV +TF+SL  +     +G A       A++ +V +GG  + ETAQELERLLGEVSS EGRL+ LLD+    P   D+  + A+D
Sbjct:   65 AQRMQTLKRLLPGLEAGQLVSRAPALLG--STQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYHE--DTLAPRIEFMKRLFPESPRLLSRAPLLLTHDPETFLMPKIHQLESLLPGIDVLKVVRTEPTILYLDIGGLVKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKFQQLQDLFPDANVVSMVESDATVLLYDYT-SVGVKVDCWRERVSNATELNQLIQDYPLLLSYSLDTSVSRLDFLIETTGVKPRPATMRTTVRMAKRDWLAVHGVKYRKFLERKVEGPSVLRLWPGLYFDSDTGSGNGSGGRLLKGEGMSAKLQDDGSVEVS--SAAEMKEASAYIKALERKYGKIIKETQLRFTPAVRRGKLGDNPSEVDMILYDIKSFDQQVRKLATGYRLKRFKELLPGLDTETLFTEYPNVLLMDLKKVEDKVEELRELLPGERVAGVVSVAPDLLLNDVQTCLRPRMTRLVAALTTVKQFQGXXXXXXXXXXXXXXXXXXXXXXXXXXVPSLQYMLQSTSDHDELATRLFRDPSLLVVGVGPLARLQYTLEQHRNGSASIALGNLGAYVGPEAALTASHHPTPWVGAGSGKAATGGTFSLRRPSTKDDASSDVHLGEDQSRLLPPVIVPQILKCQMRDFITRNPEYVSFLAQRQGLDVSSMSHSPEGD--------------------------DQS--VAFWERAVGRRLSEMFRPVDSPYARE-MREARANGKGPDGQKAPPLSELDMLIGDVLHFNDRMTVL-ASKIQKKMPQTVDVGEEAKKLAEDVKWGSRQIKRLLGLGSWTEQNVA-TPHSEVQVAEIPSQNANDASKNVCNPMSTFPQGKRRG-------KKRRWVSDTFQSLMGSVGGSAAGGADAIKVATAVEVSVKDGG--NRETAQELERLLGEVSSNEGRLDNLLDLSSSIPDNTDDSSSPAED 1013          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig9.15709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JT44_9PHAE4.170e-26556.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 604..636
e-value: 2900.0
score: 0.3
coord: 648..679
e-value: 85.0
score: 12.0
coord: 376..406
e-value: 270.0
score: 8.3
coord: 340..371
e-value: 2200.0
score: 1.2
coord: 235..266
e-value: 29.0
score: 13.6
coord: 270..301
e-value: 370.0
score: 7.2
coord: 128..162
e-value: 1500.0
score: 2.6
coord: 167..197
e-value: 110.0
score: 11.3
coord: 570..600
e-value: 72.0
score: 12.3
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 165..407
e-value: 1.4E-13
score: 50.5
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 541..712
e-value: 3.6E-9
score: 38.2
coord: 151..333
e-value: 1.3E-17
score: 65.9
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 544..689
coord: 150..397
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..1073
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.666

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig9contigD-herbacea_M_contig9:2508058..2530573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig9.15709.1mRNA_D-herbacea_M_contig9.15709.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig9 2507537..2530664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig9.15709.1 ID=prot_D-herbacea_M_contig9.15709.1|Name=mRNA_D-herbacea_M_contig9.15709.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=1074bp
MMHGGTTTTALSLFLGLAQVRLSTPFITTTVVVPSSVVRTSGAECVVVRT
SGEGCELVNRSVEESGATRPGYRGERGRVSWALDATARVEDEVDVHMEAK
RLKKAAKEKRIAHRLRTLQQLLPGLDASLLISKSPRLLGVDSQRLKRIIP
ARLAVMQSLLGPGVDAQRLVRLNPDLLLYDVKKTLGPRIVFLQSLFPESP
KLLMRAPALLYHDAEMYLLPKMAELGLLLPGVDVLRLVRREPTILSLDVA
RNIKPKLESLAEMLPGQNVTSMVGRVPRLLTSDVSGMAQKVSSLRWLLGP
SADLNKIVHRKPDLLISNVETTVAAKFRQLQDLFPEGDVVSMVERDATVL
FYDFDKSINVKVDCWRERVSNVTELDCLIQAYPVLLSYSLDTSVSRLDFL
IQTNGTEMTATKLRQVVQTARRDWDATYGDTYRKFLERKVEGPSVLRLWP
GLYFDSDTKDAGSGGNRMEGDGLKVQIQDDGSVKTSGPTATALKATAAHL
KSLEKQYGTNIKEAQLRFSSALRDGKYGSHPTEMDMIMYDIKSFDQQVRK
LATGKRMKRFRELLPGLNPDKLFTEYPQVVMMDLKKVEERVQGLRQLLVG
ADVSGAVSIAPHLLLSDVQTCLRPRMTRLVVAMSVKQLQGVLDADKVKAM
VVRCPELLLSDVRNVVVPSLQYMLRCTTDHDELGKRLFRDPSLLTVGAGP
LARLQYTLEQHRNGTANISLGTLDASVANVGGTNDASGDSEGAVDGTGTY
EPDASRLLPPVVVPQILKCQLRDFVERNPGYVSFLAQRQGLAEAGSAVSA
EGIHRGGQQHQQQHQHQQSEDSLLTDHGFDQSGQVVFWERSVGARLSEMF
RPVDSPYAREKMKEAGGKGPDGQRGEPLSELDLLVGDVLYFNHRMGVLFR
SKIQVGMPQTVDLRQEVAKLEEDVEWGSRQIRRLLGLGSWTEKGVPESSE
ARPSKAELEKEPASDSDGSSSSAWSAATDQEQPQKEKEKHHSKRTWVMET
FKSLWDNNASGRSGEAGVPALDKAVVEGGGSSLETAQELERLLGEVSSYE
GRLEGLLDMPVKADEEDALADDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF