mRNA_D-herbacea_M_contig9.15709.1 (mRNA) Desmarestia herbacea DmunM male
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Overview
Homology
BLAST of mRNA_D-herbacea_M_contig9.15709.1 vs. uniprot
Match: A0A6H5JT44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JT44_9PHAE) HSP 1 Score: 783 bits (2022), Expect = 8.560e-263 Identity = 564/996 (56.63%), Postives = 678/996 (68.07%), Query Frame = 2
Query: 425 AHRLRTLQQLLPGLDASLLISKSPRLLGVDSQRLKRIIPARLAVMQSLLGPXXXXXXXXXXNPDLLLYDVKKTLGPRIVFLQSLFPESPKLLMRAPALLYHDAEMYLLPKMAELGLLLPGVDVLRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKFRQLQDLFPEGDVVSMVERDATVLFYDFDKSINVKVDCWRERVSNVTELDCLIQAYPVLLSYSLDTSVSRLDFLIQTNGTEMTATKLRQVVQTARRDWDATYGDTYRKFLERKVEGPSVLRLWPGLYFDSDTKDA-GSGGNRMEGDGLKVQIQDDGSVKTSGPTATALKATAAHLKSLEKQYGTNIKEAQLRFSSALRDGKYGSHPTEMDMIMYDIKSFDQQVRKLATGKRMKRFRELLPGLNPDKLFTEYPQVVMMDLKKVEERVQGLRQLLVGADVSGAVSIAPHLLLSDVQTCLRPRMTRLVVAMS-VKQLQGVLDADKVKAMVVRCPELXXXDVRNVVVPSLQYMLRCTTDHDELGKRLFRDPSLLTVGAGPLARLQYTLEQHRNGTANISLGTLDASVANVGGTNDA--------SGDSEGAVDGTGTYE---------------PDASRLLPPVVVPQILKCQLRDFVERNPGYVSFLAQRQGLAEAGSAVSAEGIHRGGQQHQQQHXXQQSEDSLLTDHGFDQSGQVVFWERSVGARLSEMFRPVDSPYAREKMKEA--GGKGPDGQRGEPLSELDLLVGDVLYFNHRMGVLFRSKIQVGMPQTVDLRQEVAKLEEDVEWGSRQIRRLLGLGSWTEKGVPESSEARPSKAELEKEPASDXXXXXXXXXXXXXXXXXXXXXXXXHHSKRTWVMETFKSLWDNNASGRSGEAGV----PALDKAVVEGGGSSLETAQELERLLGEVSSYEGRLEGLLDM----PVKADEEDALADD 3307
A R++TL++LLPGL+A L+S++P LLG S + XXXXXXXXXX LL ++ TL PRI F++ LFPESP+LL RAP LL HD E +L+PK+ +L LLPG+DVL++VR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKF+QLQDLFP+ +VVSMVE DATVL YD+ S+ VKVDCWRERVSN TEL+ LIQ YP+LLSYSLDTSVSRLDFLI+T G + +R V+ A+RDW A +G YRKFLERKVEGPSVLRLWPGLYFDSDT GSGG ++G+G+ ++QDDGSV+ S +A +K +A++K+LE++YG IKE QLRF+ A+R GK G +P+E+DMI+YDIKSFDQQVRKLATG R+KRF+ELLPGL+ + LFTEYP V++MDLKKVE++V+ LR+LL G V+G VS+AP LLL+DVQTCLRPRMTRLV A++ VKQ QG XXX VPSLQYML+ T+DHDEL RLFRDPSLL VG GPLARLQYTLEQHRNG+A+I+LG L A V + +G + A GT + D SRLLPPV+VPQILKCQ+RDF+ RNP YVSFLAQRQGL + + S EG DQS V FWER+VG RLSEMFRPVDSPYARE M+EA GKGPDGQ+ PLSELD+L+GDVL+FN RM VL SKIQ MPQTVD+ +E KL EDV+WGSRQI+RLLGLGSWTE+ V + + AE+ + A+D KR WV +TF+SL + +G A A++ +V +GG + ETAQELERLLGEVSS EGRL+ LLD+ P D+ + A+D
Sbjct: 65 AQRMQTLKRLLPGLEAGQLVSRAPALLG--STQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYHE--DTLAPRIEFMKRLFPESPRLLSRAPLLLTHDPETFLMPKIHQLESLLPGIDVLKVVRTEPTILYLDIGGLVKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKFQQLQDLFPDANVVSMVESDATVLLYDYT-SVGVKVDCWRERVSNATELNQLIQDYPLLLSYSLDTSVSRLDFLIETTGVKPRPATMRTTVRMAKRDWLAVHGVKYRKFLERKVEGPSVLRLWPGLYFDSDTGSGNGSGGRLLKGEGMSAKLQDDGSVEVS--SAAEMKEASAYIKALERKYGKIIKETQLRFTPAVRRGKLGDNPSEVDMILYDIKSFDQQVRKLATGYRLKRFKELLPGLDTETLFTEYPNVLLMDLKKVEDKVEELRELLPGERVAGVVSVAPDLLLNDVQTCLRPRMTRLVAALTTVKQFQGXXXXXXXXXXXXXXXXXXXXXXXXXXVPSLQYMLQSTSDHDELATRLFRDPSLLVVGVGPLARLQYTLEQHRNGSASIALGNLGAYVGPEAALTASHHPTPWVGAGSGKAATGGTFSLRRPSTKDDASSDVHLGEDQSRLLPPVIVPQILKCQMRDFITRNPEYVSFLAQRQGLDVSSMSHSPEGD--------------------------DQS--VAFWERAVGRRLSEMFRPVDSPYARE-MREARANGKGPDGQKAPPLSELDMLIGDVLHFNDRMTVL-ASKIQKKMPQTVDVGEEAKKLAEDVKWGSRQIKRLLGLGSWTEQNVA-TPHSEVQVAEIPSQNANDASKNVCNPMSTFPQGKRRG-------KKRRWVSDTFQSLMGSVGGSAAGGADAIKVATAVEVSVKDGG--NRETAQELERLLGEVSSNEGRLDNLLDLSSSIPDNTDDSSSPAED 1013 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig9.15709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig9.15709.1 >prot_D-herbacea_M_contig9.15709.1 ID=prot_D-herbacea_M_contig9.15709.1|Name=mRNA_D-herbacea_M_contig9.15709.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=1074bp MMHGGTTTTALSLFLGLAQVRLSTPFITTTVVVPSSVVRTSGAECVVVRTback to top mRNA from alignment at D-herbacea_M_contig9:2507537..2530664- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig9.15709.1 ID=mRNA_D-herbacea_M_contig9.15709.1|Name=mRNA_D-herbacea_M_contig9.15709.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=23128bp|location=Sequence derived from alignment at D-herbacea_M_contig9:2507537..2530664- (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig9:2507537..2530664- >mRNA_D-herbacea_M_contig9.15709.1 ID=mRNA_D-herbacea_M_contig9.15709.1|Name=mRNA_D-herbacea_M_contig9.15709.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=6444bp|location=Sequence derived from alignment at D-herbacea_M_contig9:2507537..2530664- (Desmarestia herbacea DmunM male)back to top |