prot_D-herbacea_F_contig116.1180.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig116.1180.1
Unique Nameprot_D-herbacea_F_contig116.1180.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length223
Homology
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: A0A6H5K8M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M5_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 6.990e-105
Identity = 161/223 (72.20%), Postives = 193/223 (86.55%), Query Frame = 0
Query:    1 AKDCEGLRSLECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVAFR 223
            A D  GL++L+ VGSEHKNFH TISKLAKAA+KQFGG+VESVRRTP L EKALHTAIITHLYRRGAFRAAA+F+EDS A+IP +T+S LVE+HGVLDAL K NLAPAERWFEKR+ ALEGVGSSLEFQLARLRFL  L++A P QR EA+M+A+ER+ P+   +++E++ELMGSLLW+G LE SPYSHLLS +LW +V+ +V VD SR +GL+RESIL+VAFR
Sbjct:  154 ASDVAGLKTLDAVGSEHKNFHATISKLAKAAEKQFGGNVESVRRTPALNEKALHTAIITHLYRRGAFRAAAKFSEDSTASIPAETTSHLVEIHGVLDALDKHNLAPAERWFEKRRKALEGVGSSLEFQLARLRFLRFLESADPGQRREAMMYARERVMPVAGGHMRELQELMGSLLWSGNLEASPYSHLLSQELWTRVKESVAVDASRISGLSRESILSVAFR 376          
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: D8LT28_ECTSI (RING-Gid-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT28_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 2.590e-61
Identity = 99/149 (66.44%), Postives = 127/149 (85.23%), Query Frame = 0
Query:   75 EDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVAFR 223
            +DSAA+IP +T+S LVE+HGVLDAL K NL PAERWFEKR+ ALE VGSSLEFQLARLRFL  L++A P +R EA+M+A+ER+ P+  R+++E++ELMGSLLW+G LE SPYSHLLS++LW +V+ +V VD SR +GL+RESIL+VAFR
Sbjct:    2 DDSAASIPAETTSHLVEIHGVLDALDKHNLVPAERWFEKRRKALERVGSSLEFQLARLRFLRFLESADPGKRREAMMYARERVMPVAGRHMRELQELMGSLLWSGNLEASPYSHLLSLELWTRVKESVAVDASRVSGLSRESILSVAFR 150          
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: A0A7R9U2J0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2J0_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.770e-35
Identity = 83/222 (37.39%), Postives = 119/222 (53.60%), Query Frame = 0
Query:    1 AKDCEGLRSLECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVAF 222
            ++D + L   E + + +K+FH  +SKL K  +K    D ++V + P L E  L   +  H YR G  + A    E     +  D  S L  +HG+  AL ++NL PA RW  +R+    G    LEF L RL+FL IL   G   + EA+ FA+ER     D +++EI++ MG+LLWAGRL++SPY  L S + W +   A +  G  A GL   S L VAF
Sbjct:   65 SRDLKELSPHERMMAAYKSFHAGLSKLQKKVEKLRPSDFDAVGKAPPLPEAPLRELVALHCYRSGYVQTAQELCERWGLDLSDDEVSALCRLHGIASALQQRNLKPALRWVAERR----GGTGELEFMLVRLQFLEILSQPGDAVQEEALAFAQERFPDFADGHMREIQQCMGALLWAGRLDKSPYRTLASEEAWQKSVQAFLEVGCEAEGLPMHSHLLVAF 282          
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: UPI001C9CC378 (E3 ubiquitin-protein ligase RMND5A isoform X1 n=2 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9CC378)

HSP 1 Score: 120 bits (302), Expect = 9.160e-29
Identity = 74/217 (34.10%), Postives = 114/217 (52.53%), Query Frame = 0
Query:    9 SLECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRL----KEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGR-LEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAV 220
            +++ + ++H+  H T+SK+ KA D+ F  D  S  R        K + L+  I  H YR+G    A     +              E++ +LD L ++NL PA  W +K K ALE   SSLEF+L RL F+ ++Q  GP ++ EAVM+A++ L     R  KE++ LMG+LL+    ++ SPYSHLL   LW  +      +     GL+ +S L+V
Sbjct:   70 TVQRLATDHRESHSTVSKVGKAIDRNFISDFASTSREDVFAGPEKTQLLNQVIFQHFYRQGMLDIADELAAEVGMKTDETKKEPFTELNYILDCLKQRNLEPALEWAKKHKPALEERNSSLEFKLHRLHFIRLVQQ-GPSRQAEAVMYARKYLRQYVRRNEKEVRSLMGTLLYLPNGIQSSPYSHLLDPTLWLDIHDVFTKEACTLLGLSVDSPLSV 285          
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: A0A397JTR3_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JTR3_9GLOM)

HSP 1 Score: 120 bits (301), Expect = 1.000e-28
Identity = 78/218 (35.78%), Postives = 111/218 (50.92%), Query Frame = 0
Query:    8 RSLECVGS----EHKNFHVTISKLAKAADKQFGGDVESVRRTPRL---KEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESIL 218
            R+LE   S    EHK     +SK  KA D+++  D+ ++   P     KE  L   I  H  R G FR    F  ++   +P     Q + M+ +LDA+   NL PA  W + ++  LE  GSSLEFQL RL F+  L     ++R EA+M+AK        R++KEIK LMG+L++  RL  SPY+  LS D W  ++     D     G+A +S L
Sbjct:   60 RTLESYASQASEEHKEIQKIVSKYEKAIDRKWKQDI-TIASNPEAFVSKETVLQRTIALHFIRHGKFRLGNTFIGETGLDLPNSLQMQFLRMYQILDAINNLNLEPALLWAKSQRDELERRGSSLEFQLHRLHFIKYLLE---QRRDEALMYAKTNFEYFQARHMKEIKRLMGALIYINRLSSSPYADFLSKDAWTDIQQTFTRDFCNLLGMACDSPL 273          
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: U5CM20_AMBTC (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=U5CM20_AMBTC)

HSP 1 Score: 120 bits (301), Expect = 1.120e-28
Identity = 74/207 (35.75%), Postives = 108/207 (52.17%), Query Frame = 0
Query:   15 SEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVA 221
            S  K+ ++ + K  K  DK F  D+    R+    +  L+  I  H YR+G F     FT ++         +  +EM+ +L+A+  KNL PA  W    +  L   GSSLE +L RL F+ +LQ  G + R EA+ +A+  L+PL    + E++ LMG LLWAGRL+ SPY+ LLS   W  +   V  +   A G + ES L VA
Sbjct:   78 SSQKDLNMALGKYTKVIDKTFITDIAKAYRSVDFDQHTLNQIIAAHFYRQGLFDLGDLFTTEAHEPDLVSLKAPFLEMYAILEAMRLKNLEPALNWARTHRDQLLLKGSSLEMKLHRLAFVEMLQKGG-DARAEALAYARTHLAPLAXXXMAEVQRLMGCLLWAGRLDASPYAELLSPSQWELLENEVARECCGALGQSCESPLHVA 283          
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: A9SBV1_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9SBV1_PHYPA)

HSP 1 Score: 120 bits (300), Expect = 1.460e-28
Identity = 76/194 (39.18%), Postives = 99/194 (51.03%), Query Frame = 0
Query:   10 LECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDS-----AAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQV 198
            L  +G   K  + T SK  K  DK F  D+    R        ++  I+ H YR G F     F ++S     AAA+     + L EM+  LD L  KNL PA  W  K + +LE  GSSLEFQL +L+F+ +L   G   RGEA+ +AK    P +  Y+  I+ LM  LLWA RLE SPY  LLS   W +V
Sbjct:   70 LSRIGVSQKELNTTTSKYGKILDKSFNPDIAKAYRDVEFDSHLINQIIVQHFYRLGLFELGDCFAKESQESNAAAAL----KTHLYEMYQNLDQLQAKNLEPALNWARKNRQSLEAKGSSLEFQLHQLQFVHVLTTKG---RGEALEYAKLNFLPFSAEYMSGIQRLMACLLWANRLEFSPYKDLLSSAHWDKV 256          
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: A0A7S0MZH4_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MZH4_9CHLO)

HSP 1 Score: 120 bits (300), Expect = 2.620e-28
Identity = 73/213 (34.27%), Postives = 114/213 (53.52%), Query Frame = 0
Query:   10 LECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVG-SSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVA 221
            L+ + S  K+F   ++KL K  DK F  DV    R     +  L+  I+ HL R G F    +  +D+   +P     Q ++MH VL+ ++  NL PA +W ++R+   +    + LEF+L RL+F+ +L   G   R +A+ +A+  LS    + ++EI+ LMG LL+A RL+ SPY+ LLS  LW ++R           G A+ES L VA
Sbjct:   78 LQQITSHQKDFQGALAKLKKTVDKHFLPDVSKALRDQPFDKATLNEVIVQHLLREGKFELGEQLMKDAIVQLPDGYKDQYIQMHQVLEQMSAFNLKPAIQWTQERRVEADTDALACLEFKLHRLQFVQLLHKEG---RAQALSYARAHLSTFASQQMREIERLMGCLLYANRLDRSPYADLLSPGLWDEIRHEFSRMCCSTLGQAQESPLGVA 287          
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: UPI000E6FC848 (protein RMD5 homolog n=2 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC848)

HSP 1 Score: 117 bits (293), Expect = 1.490e-27
Identity = 74/204 (36.27%), Postives = 106/204 (51.96%), Query Frame = 0
Query:   18 KNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVA 221
            K  +V +SK AK  DK F  D+    RT       ++  I  H YR G F     F  ++      +  S  +EM+ +L+A++ +NL PA  W       L   GSSLE +L RL+F+ IL+      R +A+ +A+   +P    +  EI++LM SLLWAGRLE SPYS LLS   W ++   V+       G +RES L+VA
Sbjct:   79 KELNVALSKYAKLLDKSFNSDISKAYRTVDFDIHTVNQIIACHFYRLGHFDLGDCFIYEAKEPEIANLKSPFLEMYKILEAMSSRNLQPALTWASSNHALLIQNGSSLELKLHRLQFVEILKTGN---RDDALAYARAYFTPFAPLHFAEIQKLMASLLWAGRLESSPYSELLSPTHWEKLSEEVMEQFCSLIGQSRESPLSVA 279          
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: UPI00201702C0 (protein RMD5 homolog n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=UPI00201702C0)

HSP 1 Score: 115 bits (287), Expect = 2.330e-27
Identity = 68/190 (35.79%), Postives = 103/190 (54.21%), Query Frame = 0
Query:   10 LECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQL----VEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLW 195
            L  +    K  +V +SK  K  +K F  D+    R   L    ++  I +H YR+G F     F  +   A+ P++ + +    VEM+ +L+A+  +NL PA +W     + L+  GS LE +L R++F+ ILQ      R EA+ +A+  L+P    +L EI++LMG LLWAGRLE+SPY  LLS   W
Sbjct:   71 LTLLEGSQKELNVALSKYPKLLEKSFNPDISKAYRNVDLDTATINYVIASHFYRQGLFDVGDCFVTE---AMEPESIASIRSPYVEMYQILEAMKSRNLEPALKWATSNCSKLKANGSDLEVKLHRMQFVEILQRGN---RDEALKYARSHLAPFASDHLVEIQKLMGCLLWAGRLEQSPYPDLLSAANW 254          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8M5_9PHAE6.990e-10572.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT28_ECTSI2.590e-6166.44RING-Gid-type domain-containing protein n=1 Tax=Ec... [more]
A0A7R9U2J0_9STRA8.770e-3537.39Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
UPI001C9CC3789.160e-2934.10E3 ubiquitin-protein ligase RMND5A isoform X1 n=2 ... [more]
A0A397JTR3_9GLOM1.000e-2835.78Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
U5CM20_AMBTC1.120e-2835.75Uncharacterized protein n=2 Tax=Amborella trichopo... [more]
A9SBV1_PHYPA1.460e-2839.18Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]
A0A7S0MZH4_9CHLO2.620e-2834.27Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
UPI000E6FC8481.490e-2736.27protein RMD5 homolog n=2 Tax=Papaver somniferum Ta... [more]
UPI00201702C02.330e-2735.79protein RMD5 homolog n=1 Tax=Rhodamnia argentea Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 90..219
e-value: 1.0E-14
score: 54.7
IPR027711Rmd5PANTHERPTHR12170:SF3SPORULATION PROTEIN RMD5coord: 14..222
NoneNo IPR availablePANTHERPTHR12170MACROPHAGE ERYTHROBLAST ATTACHER-RELATEDcoord: 14..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig116contigD-herbacea_F_contig116:424470..432502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig116.1180.1mRNA_D-herbacea_F_contig116.1180.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig116 424469..432502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig116.1180.1 ID=prot_D-herbacea_F_contig116.1180.1|Name=mRNA_D-herbacea_F_contig116.1180.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=223bp
AKDCEGLRSLECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKE
KALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALA
KKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAV
MFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRG
AVVVDGSRAAGLARESILAVAFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027711Rmd5
IPR024964CTLH/CRA