prot_D-herbacea_F_contig116.1173.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig116.1173.1
Unique Nameprot_D-herbacea_F_contig116.1173.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length184
Homology
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BLAST of mRNA_D-herbacea_F_contig116.1173.1 vs. uniprot
Match: D8LT39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT39_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 3.170e-39
Identity = 83/189 (43.92%), Postives = 107/189 (56.61%), Query Frame = 0 
Query:    1 TVEGLPISFLKDNGYLEEARTRGLEKAARIVERLAALVRSHAWQRWRSY---TQSCTREENSVGKVHATTLARGYLARRRVARMRK--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAARRRQRARVLRAAVEMVERAFIRYKAREKGWRELAQYHKEQCGAALIQRWTRGALVRRRVPLV 184
            T   LP+S+LKD GYL EA+ RGLEK   IV+R+A + +  AWQ+WR      +S  ++  + G +    + RGYLARRRVA +R+  +                                  NA ARRR+R R++RAAV MVER +I  KARE+GWRE+  Y KE   A +IQRWTRG LVRRR PLV
Sbjct:    4 TARTLPLSYLKDIGYLGEAQRRGLEKTTNIVKRVATIAKLRAWQKWRQLGVPKRSAGKKATTTGNILCAAVTRGYLARRRVAMIRRERAKAAAQRAELKRSLLQRRLVKVSAASRIVASCLIANAWARRRERRRLVRAAVAMVERNYIARKAREQGWREIVLYRKEHAAAGMIQRWTRGVLVRRRTPLV 192
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig116.1173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT39_ECTSI3.170e-3943.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..122
NoneNo IPR availableTMHMMTMhelixcoord: 103..122
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 58..87
score: 6.778

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig116contigD-herbacea_F_contig116:309364..311918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig116.1173.1mRNA_D-herbacea_F_contig116.1173.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig116 309364..311918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig116.1173.1 ID=prot_D-herbacea_F_contig116.1173.1|Name=mRNA_D-herbacea_F_contig116.1173.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=184bp
TVEGLPISFLKDNGYLEEARTRGLEKAARIVERLAALVRSHAWQRWRSYT
QSCTREENSVGKVHATTLARGYLARRRVARMRKSKKEAEQSDPKRAILRR
RLATVSAASTIVASCLIANAAARRRQRARVLRAAVEMVERAFIRYKAREK
GWRELAQYHKEQCGAALIQRWTRGALVRRRVPLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS