prot_D-herbacea_F_contig113.1020.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig113.1020.1
Unique Nameprot_D-herbacea_F_contig113.1020.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length146
Homology
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BLAST of mRNA_D-herbacea_F_contig113.1020.1 vs. uniprot
Match: D8LJC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC6_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 2.410e-62
Identity = 94/143 (65.73%), Postives = 116/143 (81.12%), Query Frame = 0 
Query:    1 MSLPASIVFPDTREGQTMRRYVLAQTDASLFDKDATPIFAENVVFNGLLFKMKGRDNVVPLVAEFVKKELASVRFEAVVEAGSKTRYMAMYFVRLTGQEIELPVCDLLTIDDDGLIVRLENCFDTTKIPQAIIDAGAPSLAAF 143
            MSLPASIV P T EG+T+RRY L Q+DAS F + A PIF++++VFNGLLFK+KG  N+VPL A+FV  ++  VRFEA+ EAGSK +Y+ +Y+VRL GQE E+P+ DLLT+DDDGLI RLENCFDTTK PQ IIDAGAP+L  F
Sbjct:   92 MSLPASIVLPSTPEGETVRRYALGQSDASFFAEGAAPIFSKDMVFNGLLFKLKGAANIVPLFADFVANKIKEVRFEAIAEAGSKKKYLVLYYVRLEGQESEMPLVDLLTLDDDGLICRLENCFDTTKCPQEIIDAGAPTLVGF 234
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BLAST of mRNA_D-herbacea_F_contig113.1020.1 vs. uniprot
Match: A0A6H5JHF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHF2_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.160e-41
Identity = 67/101 (66.34%), Postives = 82/101 (81.19%), Query Frame = 0 
Query:   43 VVFNGLLFKMKGRDNVVPLVAEFVKKELASVRFEAVVEAGSKTRYMAMYFVRLTGQEIELPVCDLLTIDDDGLIVRLENCFDTTKIPQAIIDAGAPSLAAF 143
            +VFNGLLFK+KG  N+VPL A+FV  ++  VRFEA+ EAGSKT+Y+ +Y+VRL GQE E+ + DLLT D +GLI RLENCFDTTK PQ IIDAGAP+LA F
Sbjct:    1 MVFNGLLFKLKGAANIVPLFADFVANKIKGVRFEAIAEAGSKTKYLVLYYVRLEGQESEMSLVDLLTQDGEGLICRLENCFDTTKYPQEIIDAGAPTLAGF 101
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJC6_ECTSI2.410e-6265.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHF2_9PHAE1.160e-4166.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 11..135
e-value: 8.1E-11
score: 43.8
IPR037401SnoaL-like domainPFAMPF12680SnoaL_2coord: 37..118
e-value: 2.4E-6
score: 28.1
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 22..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig113contigD-herbacea_F_contig113:453016..454352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig113.1020.1mRNA_D-herbacea_F_contig113.1020.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig113 449879..454772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig113.1020.1 ID=prot_D-herbacea_F_contig113.1020.1|Name=mRNA_D-herbacea_F_contig113.1020.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=146bp
MSLPASIVFPDTREGQTMRRYVLAQTDASLFDKDATPIFAENVVFNGLLF
KMKGRDNVVPLVAEFVKKELASVRFEAVVEAGSKTRYMAMYFVRLTGQEI
ELPVCDLLTIDDDGLIVRLENCFDTTKIPQAIIDAGAPSLAAFVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf
IPR037401SnoaL-like