prot_D-herbacea_F_contig113.1008.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-herbacea_F_contig113.1008.1
Unique Name	prot_D-herbacea_F_contig113.1008.1
Type	polypeptide
Organism	Desmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length	328

Homology

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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: D8LH13_ECTSI (Flagellar associated protein, cobalamin adenosyltransferase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH13_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 3.570e-130
Identity = 198/259 (76.45%), Postives = 221/259 (85.33%), Query Frame = 0

Query:   34 DMTLATAVVGGGVGVGYIAFRLFSQRRDGGRDRVPVEGGGQR----------EDYPMLDMADIARRAVPRKKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMKLP 282
            +++LATA+V G VG+GY+A RL SQ +     R  + G   R          ++ PMLDMA+IARRAVPRKKSFLYTR GDKGTSQLYN+ETRPKSDP+FEALG+MDELNAS+ALA  HS LA NGLSEML+AIQSL+IDASALVATPRD SSARKI+RTGFPTWCTD LEACIDELDA+TPPLKTFI+PGGGLAASHLHLARCVCRRAERSLQPLLG  QGVEEVARY+NRLSDLLFAAARYAS+ +GKPERPW KLP
Sbjct:    9 NVSLATALVAGSVGLGYMALRLASQAQ-----RRSLTGANGRXXXXXXXXXXDERPMLDMAEIARRAVPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLALAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDNSSARKISRTGFPTWCTDQLEACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLP 262

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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A835Z3S8_9STRA (Cob(I)alamin adenosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3S8_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.130e-68
Identity = 123/205 (60.00%), Postives = 143/205 (69.76%), Query Frame = 0

Query:   79 PMLDMADIA-RRAVPR-KKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMKL 281
            P L   DIA RRAV + KKS LYT+ GDKG S LY+ E R K+D  F+ALG+ DELN+ I +A E+  LAGNGL E+L  IQS L D  A +ATPRD +S  K+ +T FP  CT  +E  IDELD+K PPLKTFILP GGLAA HLHLAR VCRRAERS  PL+   +   EV RY+NRLSD LFAAARYAS   G PE  W+K 
Sbjct:   35 PALTFDDIAARRAVAKPKKSILYTKTGDKGASSLYSGERRSKTDATFQALGASDELNSVIGVAREYCVLAGNGLDELLAEIQSRLFDVGACIATPRDKASEAKLAKTAFPPKCTMEVEFAIDELDSKLPPLKTFILPSGGLAAVHLHLARVVCRRAERSAIPLVEAGEVDPEVGRYLNRLSDFLFAAARYASHVEGAPETSWVKF 239

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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A6H5LRA6_9PHAE (Cob_adeno_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRA6_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 3.340e-63
Identity = 113/148 (76.35%), Postives = 123/148 (83.11%), Query Frame = 0

Query:   51 IAFRLFSQ--RRD--GGRDRVPVEGGGQREDYPMLDMADIARRAVPRKKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLE 194
            +AFRL SQ  RR   G   R    GG   ++ PMLDMA+IARRAVPRKKSFLYTR GDKGTSQLYN+ETRPKSDP+FEALG+MDELNAS+ALA  HS LA NGLSEML+AIQSL+IDASALVATPRD SSARKINRTGFP WCTD LE
Sbjct:    1 MAFRLASQAQRRSLTGANGRGSGGGGEGGDERPMLDMAEIARRAVPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLALAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDKSSARKINRTGFPAWCTDQLE 148

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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A835Z8K8_9STRA (Cobalamin adenosyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K8_9STRA)

HSP 1 Score: 204 bits (519), Expect = 4.850e-61
Identity = 108/192 (56.25%), Postives = 134/192 (69.79%), Query Frame = 0

Query:   88 RRAVPRKKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWM 279
            RR    KKS LYTR GDKG+S L++ E R K+DP F A+G  DELN+   +A ++  +AGNGL  +L  IQS L+D  A +ATPR+ S+  K+ +T FP  CT  LE  IDELD+K P LKTFILP GGLAA+HLH+AR VCRRAER++ PLL       EV RY+NRLSD  FAAARYA++A G  ER W+
Sbjct:   53 RRETRLKKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWI 244

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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A7S3GR11_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GR11_9STRA)

HSP 1 Score: 192 bits (488), Expect = 5.470e-56
Identity = 107/192 (55.73%), Postives = 129/192 (67.19%), Query Frame = 0

Query:   91 VPRKKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMKLP 282
            V RKKS LYT+ GDKG S LYN E R K+D  F  LG  DELNA+I +A+E+  L+ NGL  ML  IQS L D  A VATP ++SS  K+  T F    T  LE  ID+LDAK PPL  F++P GGL+A+HL+LAR +CRRAERS+ PL+  +    EV RY+NRLSDLLFAA R ASM   K E  W+K P
Sbjct:   85 VKRKKSALYTKTGDKGMSSLYNGERRSKNDMIFHTLGHQDELNAAIGVASEYCMLSNNGLQPMLSEIQSRLFDLGAAVATPVNSSSEAKVAYTKFSPKFTARLEEWIDDLDAKLPPLTNFVIPSGGLSATHLNLARTICRRAERSVVPLVEDDLVDGEVGRYLNRLSDLLFAAQRTASMRENKEEFLWIKAP 276

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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A4D9CVG6_9STRA (Cob_adeno_trans domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVG6_9STRA)

HSP 1 Score: 186 bits (471), Expect = 9.450e-54
Identity = 102/187 (54.55%), Postives = 127/187 (67.91%), Query Frame = 0

Query:   94 KKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMK 280
            KKS +YTR GDKGTS LYN E RPK+D  FEALG+ DELNA+I +A EH++ A +GL   L  IQS L+D  A VATP  TS   K  RT F       +E  ID++D++ P LK FILP GG+ ++HLHLAR +CRRAERS+ PL+  EQ   EV  Y+NRLSD LF AAR+A+ + G  E  W+K
Sbjct:   70 KKSGIYTRTGDKGTSSLYNGERRPKNDLTFEALGATDELNAAIGVAKEHAS-AKSGLERPLSQIQSRLLDLGAAVATPAQTSDEHKRERTRFDHLHVVKVEEWIDDMDSRLPALKNFILPSGGVCSAHLHLARTICRRAERSIIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWVK 255

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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A7S1UE78_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE78_9STRA)

HSP 1 Score: 183 bits (464), Expect = 4.890e-52
Identity = 97/187 (51.87%), Postives = 128/187 (68.45%), Query Frame = 0

Query:   95 KSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSA-RKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMK 280
            KS LYTR GD G S LYN+E R K D  FEALG++DEL+A + +AAEH+ + GNGL + + +IQS LID  A + TPR+T+++ RK+ RT FP      LE   D LD++ PPL+ FIL GGG  A+HLH+AR VCRR+ER +  L+   Q    V +++NRLSD LFAAARYA++  GK E  + K
Sbjct:  114 KSKLYTRTGDGGVSSLYNMERREKDDLVFEALGAVDELHAHLGVAAEHAIMVGNGLHDTIRSIQSRLIDVGAAIGTPRETTTSDRKLKRTEFPEHYVLRLERYADALDSQLPPLRNFILAGGGFCAAHLHVARTVCRRSERVVVGLIRSGQTEPSVGKFLNRLSDTLFAAARYAALCEGKGETAYRK 300

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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: UPI000644D468 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D468)

HSP 1 Score: 176 bits (446), Expect = 1.390e-50
Identity = 99/188 (52.66%), Postives = 126/188 (67.02%), Query Frame = 0

Query:   94 KKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGG-GLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMK 280
            K+S LYT+ GDKG S L+N E +PK D  F ALG++DELNA++ +A E+    GNGL E +  IQSL++D  +  ATP DTS    + +T F       LE+ ID LD+K PPLK FI+P G GLA+SHLH+AR VCRRAER +  L   +   E+VA +VNRLSD LFAA RYA+M +GK E  W K
Sbjct:   21 KRSRLYTKTGDKGYSSLFNGERKPKDDSFFHALGAIDELNATLGVALEYCIADGNGLQEYIEKIQSLMLDIGSCCATPLDTSKESHLAKTRFSDKHVIVLESWIDLLDSKLPPLKNFIVPCGVGLASSHLHVARAVCRRAERDIVSLSRHQVIPEDVAIFVNRLSDFLFAACRYAAMKSGKSESIWKK 208

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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A662WEE6_9STRA (Cob_adeno_trans domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WEE6_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.650e-50
Identity = 109/207 (52.66%), Postives = 134/207 (64.73%), Query Frame = 0

Query:   79 PMLDMADIARRAVPRKKSF-LYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNG-LSEMLLAIQSLLIDASALVATPRDTSSARKINRTG-FPTWCTDHLEACIDELDAKTPPLKTFILP-GGGLAASHLHLARCVCRRAERSLQPLL--GPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWM 279
            P+L    IA  AV R +   +YT+ GDKGTSQL++ E RPK D  F+ALG  DELNA I +A E + L  N  L + L  IQS L D  A VATP  T+S  K  RTG F       LE  IDE+D + PPLK FILP GGGLA++HLH+AR VCRRAERS+ PL+  G  +GV  V RY+NRLSD LF +AR+A++  GK E  W+
Sbjct:    8 PLLPPRAIAALAVARSRGMKVYTKTGDKGTSQLFSGERRPKDDAVFQALGDTDELNAQIGVAVEQARLVNNDILPQRLEQIQSRLFDLGACVATPLTTASQSKQKRTGTFDDANVAQLEQWIDEMDLELPPLKCFILPSGGGLASTHLHVARAVCRRAERSVVPLVAAGDVEGV--VQRYLNRLSDFLFVSARFAAVREGKEETKWV 212

[Close]

BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A6H5LA73_9PHAE (Cob_adeno_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA73_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 5.200e-50
Identity = 81/91 (89.01%), Postives = 86/91 (94.51%), Query Frame = 0

Query:  192 HLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMKLP 282
            H EACIDELDA+TPPLKTFI+PGGGLAASHLHLARCVCRRAERSLQPLLG  QGVEEVARY+NRLSDLLFAAARYAS+ +GKPERPW KLP
Sbjct:   11 HREACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLP 101

The following BLAST results are available for this feature:

BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot

BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LH13_ECTSI	3.570e-130	76.45	Flagellar associated protein, cobalamin adenosyltr...	[more]
A0A835Z3S8_9STRA	1.130e-68	60.00	Cob(I)alamin adenosyltransferase n=1 Tax=Tribonema...	[more]
A0A6H5LRA6_9PHAE	3.340e-63	76.35	Cob_adeno_trans domain-containing protein n=1 Tax=...	[more]
A0A835Z8K8_9STRA	4.850e-61	56.25	Cobalamin adenosyltransferase-domain-containing pr...	[more]
A0A7S3GR11_9STRA	5.470e-56	55.73	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A4D9CVG6_9STRA	9.450e-54	54.55	Cob_adeno_trans domain-containing protein n=1 Tax=...	[more]
A0A7S1UE78_9STRA	4.890e-52	51.87	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]
UPI000644D468	1.390e-50	52.66	hypothetical protein n=1 Tax=Acytostelium subglobo...	[more]
A0A662WEE6_9STRA	1.650e-50	52.66	Cob_adeno_trans domain-containing protein n=2 Tax=...	[more]
A0A6H5LA73_9PHAE	5.200e-50	89.01	Cob_adeno_trans domain-containing protein n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036451	Cobalamin adenosyltransferase-like superfamily	GENE3D	1.20.1200.10		coord: 107..289 e-value: 1.5E-53 score: 182.9
IPR036451	Cobalamin adenosyltransferase-like superfamily	SUPERFAMILY	89028	Cobalamin adenosyltransferase-like	coord: 98..279
IPR016030	Cobalamin adenosyltransferase-like	PFAM	PF01923	Cob_adeno_trans	coord: 99..266 e-value: 1.8E-48 score: 164.8
IPR029499	ATP:cob(I)alamin adenosyltransferase, PduO-type	TIGRFAM	TIGR00636	TIGR00636	coord: 99..278 e-value: 2.8E-40 score: 135.8
IPR029499	ATP:cob(I)alamin adenosyltransferase, PduO-type	PANTHER	PTHR12213	1,3-PROPANEDIOL DEHYDROGENASE-RELATED	coord: 94..279
None	No IPR available	PANTHER	PTHR12213:SF0	COB(I)YRINIC ACID A,C-DIAMIDE ADENOSYLTRANSFERASE, MITOCHONDRIAL	coord: 94..279
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 57..327
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..56
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..34
None	No IPR available	PRODOM	PD007457		coord: 104..280 e-value: 1.0E-34 score: 368.0
None	No IPR available	TMHMM	TMhelix		coord: 35..57

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-herbacea_F_contig113	contig	D-herbacea_F_contig113:200663..207949 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female	2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90	2022-09-16
OGS1.0 of Desmarestia herbacea DmunF female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-herbacea_F_contig113.1008.1	mRNA_D-herbacea_F_contig113.1008.1	Desmarestia herbacea DmunF female	mRNA	D-herbacea_F_contig113 199744..208149 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-herbacea_F_contig113.1008.1 ID=prot_D-herbacea_F_contig113.1008.1|Name=mRNA_D-herbacea_F_contig113.1008.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=328bp
MHRCLSRSLLAKRDTFAVRGLLPNLGVSMPRSHDMTLATAVVGGGVGVGY
IAFRLFSQRRDGGRDRVPVEGGGQREDYPMLDMADIARRAVPRKKSFLYT
RRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGL
SEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDEL
DAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVA
RYVNRLSDLLFAAARYASMANGKPERPWMKLPSPETPASSDSSPPDTATG
NEAATTDGEVASVEPTENGVSPETKGG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029499	PduO-typ
IPR016030	CblAdoTrfase-like
IPR036451	CblAdoTrfase-like_sf