mRNA_D-herbacea_F_contig113.1008.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig113.1008.1
Unique NamemRNA_D-herbacea_F_contig113.1008.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: D8LH13_ECTSI (Flagellar associated protein, cobalamin adenosyltransferase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH13_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 7.880e-125
Identity = 198/259 (76.45%), Postives = 221/259 (85.33%), Query Frame = 3 
Query:  300 DMTLATAVVGGGVGVGYIAFRLFSQRRDGGRDRVPVEGGGQR----------EDYPMLDMADIARRAVPRKKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMKLP 1046
            +++LATA+V G VG+GY+A RL SQ +     R  + G   R          ++ PMLDMA+IARRAVPRKKSFLYTR GDKGTSQLYN+ETRPKSDP+FEALG+MDELNAS+ALA  HS LA NGLSEML+AIQSL+IDASALVATPRD SSARKI+RTGFPTWCTD LEACIDELDA+TPPLKTFI+PGGGLAASHLHLARCVCRRAERSLQPLLG  QGVEEVARY+NRLSDLLFAAARYAS+ +GKPERPW KLP
Sbjct:    9 NVSLATALVAGSVGLGYMALRLASQAQ-----RRSLTGANGRXXXXXXXXXXDERPMLDMAEIARRAVPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLALAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDNSSARKISRTGFPTWCTDQLEACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLP 262
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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A835Z3S8_9STRA (Cob(I)alamin adenosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3S8_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.190e-64
Identity = 123/205 (60.00%), Postives = 143/205 (69.76%), Query Frame = 3 
Query:  435 PMLDMADIA-RRAVPR-KKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMKL 1043
            P L   DIA RRAV + KKS LYT+ GDKG S LY+ E R K+D  F+ALG+ DELN+ I +A E+  LAGNGL E+L  IQS L D  A +ATPRD +S  K+ +T FP  CT  +E  IDELD+K PPLKTFILP GGLAA HLHLAR VCRRAERS  PL+   +   EV RY+NRLSD LFAAARYAS   G PE  W+K 
Sbjct:   35 PALTFDDIAARRAVAKPKKSILYTKTGDKGASSLYSGERRSKTDATFQALGASDELNSVIGVAREYCVLAGNGLDELLAEIQSRLFDVGACIATPRDKASEAKLAKTAFPPKCTMEVEFAIDELDSKLPPLKTFILPSGGLAAVHLHLARVVCRRAERSAIPLVEAGEVDPEVGRYLNRLSDFLFAAARYASHVEGAPETSWVKF 239
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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A6H5LRA6_9PHAE (Cob_adeno_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRA6_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 1.970e-59
Identity = 113/148 (76.35%), Postives = 123/148 (83.11%), Query Frame = 3 
Query:  351 IAFRLFSQ--RRD--GGRDRVPVEGGGQREDYPMLDMADIARRAVPRKKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLE 782
            +AFRL SQ  RR   G   R    GG   ++ PMLDMA+IARRAVPRKKSFLYTR GDKGTSQLYN+ETRPKSDP+FEALG+MDELNAS+ALA  HS LA NGLSEML+AIQSL+IDASALVATPRD SSARKINRTGFP WCTD LE
Sbjct:    1 MAFRLASQAQRRSLTGANGRGSGGGGEGGDERPMLDMAEIARRAVPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLALAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDKSSARKINRTGFPAWCTDQLE 148
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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A835Z8K8_9STRA (Cobalamin adenosyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K8_9STRA)

HSP 1 Score: 204 bits (519), Expect = 2.590e-57
Identity = 108/192 (56.25%), Postives = 134/192 (69.79%), Query Frame = 3 
Query:  462 RRAVPRKKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWM 1037
            RR    KKS LYTR GDKG+S L++ E R K+DP F A+G  DELN+   +A ++  +AGNGL  +L  IQS L+D  A +ATPR+ S+  K+ +T FP  CT  LE  IDELD+K P LKTFILP GGLAA+HLH+AR VCRRAER++ PLL       EV RY+NRLSD  FAAARYA++A G  ER W+
Sbjct:   53 RRETRLKKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWI 244
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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A7S3GR11_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GR11_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.810e-52
Identity = 107/192 (55.73%), Postives = 129/192 (67.19%), Query Frame = 3 
Query:  471 VPRKKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMKLP 1046
            V RKKS LYT+ GDKG S LYN E R K+D  F  LG  DELNA+I +A+E+  L+ NGL  ML  IQS L D  A VATP ++SS  K+  T F    T  LE  ID+LDAK PPL  F++P GGL+A+HL+LAR +CRRAERS+ PL+  +    EV RY+NRLSDLLFAA R ASM   K E  W+K P
Sbjct:   85 VKRKKSALYTKTGDKGMSSLYNGERRSKNDMIFHTLGHQDELNAAIGVASEYCMLSNNGLQPMLSEIQSRLFDLGAAVATPVNSSSEAKVAYTKFSPKFTARLEEWIDDLDAKLPPLTNFVIPSGGLSATHLNLARTICRRAERSVVPLVEDDLVDGEVGRYLNRLSDLLFAAQRTASMRENKEEFLWIKAP 276
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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A4D9CVG6_9STRA (Cob_adeno_trans domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVG6_9STRA)

HSP 1 Score: 186 bits (471), Expect = 2.340e-50
Identity = 102/187 (54.55%), Postives = 127/187 (67.91%), Query Frame = 3 
Query:  480 KKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMK 1040
            KKS +YTR GDKGTS LYN E RPK+D  FEALG+ DELNA+I +A EH++ A +GL   L  IQS L+D  A VATP  TS   K  RT F       +E  ID++D++ P LK FILP GG+ ++HLHLAR +CRRAERS+ PL+  EQ   EV  Y+NRLSD LF AAR+A+ + G  E  W+K
Sbjct:   70 KKSGIYTRTGDKGTSSLYNGERRPKNDLTFEALGATDELNAAIGVAKEHAS-AKSGLERPLSQIQSRLLDLGAAVATPAQTSDEHKRERTRFDHLHVVKVEEWIDDMDSRLPALKNFILPSGGVCSAHLHLARTICRRAERSIIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWVK 255
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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A7S1UE78_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE78_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.070e-48
Identity = 97/187 (51.87%), Postives = 128/187 (68.45%), Query Frame = 3 
Query:  483 KSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSA-RKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMK 1040
            KS LYTR GD G S LYN+E R K D  FEALG++DEL+A + +AAEH+ + GNGL + + +IQS LID  A + TPR+T+++ RK+ RT FP      LE   D LD++ PPL+ FIL GGG  A+HLH+AR VCRR+ER +  L+   Q    V +++NRLSD LFAAARYA++  GK E  + K
Sbjct:  114 KSKLYTRTGDGGVSSLYNMERREKDDLVFEALGAVDELHAHLGVAAEHAIMVGNGLHDTIRSIQSRLIDVGAAIGTPRETTTSDRKLKRTEFPEHYVLRLERYADALDSQLPPLRNFILAGGGFCAAHLHVARTVCRRSERVVVGLIRSGQTEPSVGKFLNRLSDTLFAAARYAALCEGKGETAYRK 300
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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: UPI000644D468 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D468)

HSP 1 Score: 176 bits (446), Expect = 2.180e-47
Identity = 99/188 (52.66%), Postives = 126/188 (67.02%), Query Frame = 3 
Query:  480 KKSFLYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGLSEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDELDAKTPPLKTFILPGG-GLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMK 1040
            K+S LYT+ GDKG S L+N E +PK D  F ALG++DELNA++ +A E+    GNGL E +  IQSL++D  +  ATP DTS    + +T F       LE+ ID LD+K PPLK FI+P G GLA+SHLH+AR VCRRAER +  L   +   E+VA +VNRLSD LFAA RYA+M +GK E  W K
Sbjct:   21 KRSRLYTKTGDKGYSSLFNGERKPKDDSFFHALGAIDELNATLGVALEYCIADGNGLQEYIEKIQSLMLDIGSCCATPLDTSKESHLAKTRFSDKHVIVLESWIDLLDSKLPPLKNFIVPCGVGLASSHLHVARAVCRRAERDIVSLSRHQVIPEDVAIFVNRLSDFLFAACRYAAMKSGKSESIWKK 208
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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A662WEE6_9STRA (Cob_adeno_trans domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WEE6_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.630e-47
Identity = 109/207 (52.66%), Postives = 134/207 (64.73%), Query Frame = 3 
Query:  435 PMLDMADIARRAVPRKKSF-LYTRRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNG-LSEMLLAIQSLLIDASALVATPRDTSSARKINRTG-FPTWCTDHLEACIDELDAKTPPLKTFILP-GGGLAASHLHLARCVCRRAERSLQPLL--GPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWM 1037
            P+L    IA  AV R +   +YT+ GDKGTSQL++ E RPK D  F+ALG  DELNA I +A E + L  N  L + L  IQS L D  A VATP  T+S  K  RTG F       LE  IDE+D + PPLK FILP GGGLA++HLH+AR VCRRAERS+ PL+  G  +GV  V RY+NRLSD LF +AR+A++  GK E  W+
Sbjct:    8 PLLPPRAIAALAVARSRGMKVYTKTGDKGTSQLFSGERRPKDDAVFQALGDTDELNAQIGVAVEQARLVNNDILPQRLEQIQSRLFDLGACVATPLTTASQSKQKRTGTFDDANVAQLEQWIDEMDLELPPLKCFILPSGGGLASTHLHVARAVCRRAERSVVPLVAAGDVEGV--VQRYLNRLSDFLFVSARFAAVREGKEETKWV 212
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BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Match: A0A6H5LA73_9PHAE (Cob_adeno_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA73_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 6.420e-47
Identity = 81/91 (89.01%), Postives = 86/91 (94.51%), Query Frame = 3 
Query:  774 HLEACIDELDAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVARYVNRLSDLLFAAARYASMANGKPERPWMKLP 1046
            H EACIDELDA+TPPLKTFI+PGGGLAASHLHLARCVCRRAERSLQPLLG  QGVEEVARY+NRLSDLLFAAARYAS+ +GKPERPW KLP
Sbjct:   11 HREACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLP 101
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH13_ECTSI7.880e-12576.45Flagellar associated protein, cobalamin adenosyltr... [more]
A0A835Z3S8_9STRA1.190e-6460.00Cob(I)alamin adenosyltransferase n=1 Tax=Tribonema... [more]
A0A6H5LRA6_9PHAE1.970e-5976.35Cob_adeno_trans domain-containing protein n=1 Tax=... [more]
A0A835Z8K8_9STRA2.590e-5756.25Cobalamin adenosyltransferase-domain-containing pr... [more]
A0A7S3GR11_9STRA1.810e-5255.73Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A4D9CVG6_9STRA2.340e-5054.55Cob_adeno_trans domain-containing protein n=1 Tax=... [more]
A0A7S1UE78_9STRA1.070e-4851.87Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
UPI000644D4682.180e-4752.66hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A662WEE6_9STRA2.630e-4752.66Cob_adeno_trans domain-containing protein n=2 Tax=... [more]
A0A6H5LA73_9PHAE6.420e-4789.01Cob_adeno_trans domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig113contigD-herbacea_F_contig113:199744..208149 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score382.1
Seed ortholog evalue2.6e-103
Seed eggNOG ortholog2880.D8LH13
KEGG rclassRC00533
KEGG koko:K00798
KEGG ReactionR01492,R05220,R07268
KEGG Pathwayko00860,ko01100,map00860,map01100
KEGG ModuleM00122
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.cob(I)yrinic acid a,c-diamide adenosyltransferase activity
EggNOG OGs2QS64@2759,COG2096@1
Ec32 ortholog descriptionflagellar associated protein, cobalamin adenosyltransferase-like protein
Ec32 orthologEc-06_010830.1
EC2.5.1.17
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons5
Model size2103
Cds size984
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927531.7644482-UTR-D-herbacea_F_contig113:199743..2006621622927531.7644482-UTR-D-herbacea_F_contig113:199743..200662Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig113 199744..200662 -
1690790218.864811-UTR-D-herbacea_F_contig113:199743..2006621690790218.864811-UTR-D-herbacea_F_contig113:199743..200662Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig113 199744..200662 -
1622927531.8513918-UTR-D-herbacea_F_contig113:207949..2081491622927531.8513918-UTR-D-herbacea_F_contig113:207949..208149Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig113 207950..208149 -
1690790218.9516003-UTR-D-herbacea_F_contig113:207949..2081491690790218.9516003-UTR-D-herbacea_F_contig113:207949..208149Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig113 207950..208149 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927531.7805471-CDS-D-herbacea_F_contig113:200662..2008941622927531.7805471-CDS-D-herbacea_F_contig113:200662..200894Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 200663..200894 -
1690790218.8902612-CDS-D-herbacea_F_contig113:200662..2008941690790218.8902612-CDS-D-herbacea_F_contig113:200662..200894Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 200663..200894 -
1622927531.7943616-CDS-D-herbacea_F_contig113:202053..2022231622927531.7943616-CDS-D-herbacea_F_contig113:202053..202223Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 202054..202223 -
1690790218.9067187-CDS-D-herbacea_F_contig113:202053..2022231690790218.9067187-CDS-D-herbacea_F_contig113:202053..202223Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 202054..202223 -
1622927531.8111837-CDS-D-herbacea_F_contig113:202768..2030231622927531.8111837-CDS-D-herbacea_F_contig113:202768..203023Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 202769..203023 -
1690790218.9173126-CDS-D-herbacea_F_contig113:202768..2030231690790218.9173126-CDS-D-herbacea_F_contig113:202768..203023Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 202769..203023 -
1622927531.8242779-CDS-D-herbacea_F_contig113:204121..2043611622927531.8242779-CDS-D-herbacea_F_contig113:204121..204361Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 204122..204361 -
1690790218.9336796-CDS-D-herbacea_F_contig113:204121..2043611690790218.9336796-CDS-D-herbacea_F_contig113:204121..204361Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 204122..204361 -
1622927531.838965-CDS-D-herbacea_F_contig113:207862..2079491622927531.838965-CDS-D-herbacea_F_contig113:207862..207949Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 207863..207949 -
1690790218.943251-CDS-D-herbacea_F_contig113:207862..2079491690790218.943251-CDS-D-herbacea_F_contig113:207862..207949Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 207863..207949 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig113.1008.1prot_D-herbacea_F_contig113.1008.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig113 200663..207949 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig113.1008.1

>prot_D-herbacea_F_contig113.1008.1 ID=prot_D-herbacea_F_contig113.1008.1|Name=mRNA_D-herbacea_F_contig113.1008.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=328bp
MHRCLSRSLLAKRDTFAVRGLLPNLGVSMPRSHDMTLATAVVGGGVGVGY
IAFRLFSQRRDGGRDRVPVEGGGQREDYPMLDMADIARRAVPRKKSFLYT
RRGDKGTSQLYNLETRPKSDPAFEALGSMDELNASIALAAEHSALAGNGL
SEMLLAIQSLLIDASALVATPRDTSSARKINRTGFPTWCTDHLEACIDEL
DAKTPPLKTFILPGGGLAASHLHLARCVCRRAERSLQPLLGPEQGVEEVA
RYVNRLSDLLFAAARYASMANGKPERPWMKLPSPETPASSDSSPPDTATG
NEAATTDGEVASVEPTENGVSPETKGG*
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mRNA from alignment at D-herbacea_F_contig113:199744..208149-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig113.1008.1 ID=mRNA_D-herbacea_F_contig113.1008.1|Name=mRNA_D-herbacea_F_contig113.1008.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=8406bp|location=Sequence derived from alignment at D-herbacea_F_contig113:199744..208149- (Desmarestia herbacea DmunF female)
TCTGACCCTGCCTGACTCCTTCCTGTGTGTGACTGCTTCTTTGTTGTGCT
GTGTGGTTACATTGACTGACCTACTTCGTTTCCGACATCCTATGAGTAAA
ACAACATACAGCAGTGGAAATAACTACACGTGGGAATCGTTGAACAAGCC
CTGCTGTCCAGCTTCGACAAAGGCGTCACAACAGTGCTGCTGATCCGCGA
ATGCACCGCTGCTTGTCGCGCTCCCTGCTAGCGAAGCGGGATACGTTTGC
GGTGAGGGGTCTCCTTCCCAACCTCGGAGTATCTATGGTGAGCGCCGCTT
TTGAGTGCAGTGGAGTTACGGGAGTACAGACATTTGAGCAAAGCCTTGCC
TTTCGATGATTTGCTGGCCATTCACACCCGGCGGAAGCTATTGCGTCGTG
CTGCTGTGGATCTGATGGAGACACGCGTGTTTTCGTCCTCTTGTGTGGCA
AGCTTGGCATGTTGCCTGGTACCAGAGAGTTTTACTATTAATATTAATAC
TATTATACTACTGTATAATAGCGTGCATACCTGTTTACCTGGGACTGACT
GTATTTGGTATGAGTTCATAAGACTATACATGGTCGTCACTGCCCGACAG
GCTCGCAGGATTTTAGGGCGCATGCCAAGGAAGGGTGTGAAAGGAAATCC
GCAAGGCAACGTGTTGGTGGCGTAAACATCGTGCCTAAAGAGTAAGAGAA
AATCGCAGTCGTACACGTAAACCGTGTTTTCAACATTAGGGGCGAGACGA
AACCCAAGCAGGTGTGAAAGGAAATCCGCGAGGCAACATGTCGGTGGCGT
AAACATCGTGCCTAAAGAGTAAGGGAAAATCGTAGTACCTCGTACGTAAA
ACGTGTTTTCAACATTAGAGTAGAGACGAAACCCAAGCAGGAGACACTGC
ACTGATATGATATCATCCCCAAATGGTAGGCGTTTCTATCTAAGCGCAGT
TTGGCAATATTCCACGGTCGCCGATAGTAGTACAGCTGCAGGACTACAGT
ACAGTAGTACGGTACAGCACACATCCCACAGTAGAATGATAAATCATGCC
TGTAGAACAGTACAGGAGTAGTAATAGTGTTAATAGTATAATAGTAGGAC
CTGGTGTAGTAGAAGTACCCGTGGCTTAGAAAAAAAGACGACGCCATGCG
GATTTGAACTCAGGCTACAGAGAATACGGAGCAAAATTATAAGTCAACAG
GTTATTAAATTGATTGATGTTACTTTTCGTTTTTTCGTGATTTTTTTTTT
ACGGTGTTGTGATGGTAGTGGTACAACAGTCATATGAGGAGGTTTCTCCG
CTATTTTGTTTTGTATCATACCTCGCACTGCATCTATCTATCTCACACCG
TCTCTCCTCTATGATAGATAGCTACTCTACTGTAGCACTCTTTGAGCTAT
CACTTTGCCAGCAGGCACTCTGCTGGTCACTCTTTGGCCAGCCCTCCCTT
CTTATGCATCCGCCCCTCCTTTCTTGTATAACTTATTGTCTTTGTCGTCG
TTTATCTGTTGCTGAAGCTGTGCGAGTTGGTCCAGCCGCAACCCTAACAT
TGTTTCCGCTGCTGACTGTATCTCATGAACCACAGCGAGTTACCGGCCGC
ATACGAACACAAAGGCATTGCTGCAATCGTCCAATCATCACATGACGCAG
CATGTGCATAGCTATGCAACTAGCAGGGACTCTGCCGGGCACACCAGCCA
GGCCTCCCTTCTTATGCATCCACCCCTCCTAGGAACGTACTCATGATACT
ACTACTACTGTTATTGTTGTAGAGCCTACAAAAATACACGAACTCTGGCT
ATTGTGGTGGACCCTTCGTATTATTTTGCGTATCTTGGGACAGAAAGGAG
AGAAAACACCCGAATCTCCGCGGCTCTTCTCGCCGGGCGTCGCGATGCCA
CACCAATGCCGCCTGTGTCCATACGCGATATCGGTACACTCGCTGTAAGT
ATAGGATCAGGATTCGGTACCCTGTTAGCCATTTGGGACAATCGTATATA
GGTGTACACAAAAATTCAGTTTTTGAGGTGGGTCGCTGTGGCGGGCTCTT
CAGACAGTCGAAGGCTGTTCGTTCAGACTGTCAAAACTGTCTGCTGTCGT
GCAACGTCAGCACATTACTTCGGGCTGTTTGACATGAACAGCCGTGCAAC
GTCAGCTTCTTTAATTTTTTGTTGTCAGCTGACAAAAAGACGTTTCGCAC
ACGACGCGCACACACAGCCCAGCTCCTGACGTGCTGAGACAGCTCCTGAC
AAGTACCAACACACACACACACACACACACACACACACACACACACACAC
ACACACACACCTCCTAATCGTCCTCCTCTCGGGCCACGATAACCTTCGTG
GACCATAGTCGACGAGATTGGTGATGATACGTGTCTACTGAGAACCATCG
CTAGGCTTGCATGATGCTTTTGGGGTCCCGAATAGTCACGCCCAGGTTCG
CGGCGTCAACAAATCGTGTCACACATAGGGGCAAACCAGCCTTTTTACGG
CCATTTCTTATACAGTCGAATTAAAAGGATAGAAAAACAAGGCTATTTCC
GATCGGGCTGCGAGTTGTGTAGACCTCTTTCTTAGACCTCTTTCTTATTA
TATACAGTATAGTTGTATGGATCGAGTTTGTAGTTTTTGAACAGTTCCGA
GAAAAAGGGATATATTGTAGGGCATATAGTATACATACGTAGGCGAAAGT
CAAATCGATACTGCTTCTCTGTCCTACTCGTGGGTTCTAGGAGGTCTTCG
TCCCTCAGCAGCTGTGCCGAAGCACACATACCCATGTCTCGCCTGGCCTC
GAGCGACGCGTGCGCTTCACGCGAGGGGGGTTATCGCCCGAGTCGTCGTC
GAGGTTGTGCGGCGTTGGACGTTCGTCAAGAGACGCCAACGCTACGCAGC
CAGATCATGCAGCTGTTGGCAAGCGCTAGGTCATCGGTACCGCGCGCTGC
TGCCATCAGAAGATGATGGTATGCGGCGAGCACCACCACCAGCAGTGATA
GCAGCCAAGCCAGCATCGGCGTTGTTTTCGTGTGGAGCGTGGTGTGGGTG
TATGTGTAGGTGTGTGGTTTGAGTTGTGATATGAGATGTGTCTATCTATA
CAGTCAGTACTACAACAGACAGTAGTACAAGTACAACAACAAACAATAAC
AATAGCAGTTTTTACTTACAAAGACATCTTCAGCCGTGACGTTCCAAACT
GGTTCGGGGGCCAGGGAATAATCGTCAACCTCACTGTGTGATACATCTGT
CGCGCGGATTCTATCGATCCTCAGATAAGTTATAACGCAGTGGCTCCCCT
GGGGTGTTCCGGGCTCTACAGGATAATTTTGGGAAACAGATAATGGCCCA
ACCCACAGCTTACGCAGGCTATGATACATCGAACTTGCGGCCCCTGAACA
ACTGTTGTACTAACAACGATGATAGAAGAAGTTGTTGTGGCCGGCACGGT
TTTCCCTCAACCGCCTGATCCGCCCATCGACAACACATTGCATGTCTTAT
TCCATCCAAAATTATTTTCACTACTCCACTCTGTCGCCCACGAACCGCGC
ACTACATTAATGGTTTGGGCGGTAAAAAATGTGCACCGTGTCCTAGGGTT
GGCGGAGGTTCGGACTCGGACTAGCGTTGTAGGCGTTCTACGTCGGTTCC
GTTGTGTCGCAGTTGGAGCGTGAACGAACAAACAAAAAATGATACAAGCC
ATATATTTCGACGAACTGGTAGGCTATCTCCCTTTATTCTTTCTCTCTCT
CTCGCTCTCTCCAATGCTTCCCGTCCCCCACAATGCAGCCTCGCTCGCAC
GATATGACGCTCGCTACGGCGGTGGTAGGCGGCGGGGTTGGCGTCGGTTA
CATTGCGTTCCGGCTGTTTTCGCAAAGGCGAGATGGGGGCAGGGACAGGG
TACCGGTGGAAGGGGGGGGGCAACGCGAGGACTACCCGATGCTAGACATG
GCGGATATCGCGAGGAGAGCCGTTCCGAGGAAGAAATCATTCCTCTACAC
CAGGCGTGGAGACAAGGGAACTTCGCAGGTGCGACACAATAATTACATAC
TATTGTATACAGTAGTAGTAGCATGTTTGTATAGTAGCTCGTTTTTGACA
CCGACGGTGCAATGTATGATGTTTCTTGAAGGGGTGTGGATTAGGTCTGT
TCCTGGTGTGGGTGGTGGAATTTATGGTGGTAGTCACAAGGGGTGAGGAT
TACCCCCCCCCCCCCCCGCGCCGTCCTTTTGGTGTTAGCTCTTGCATAGC
CGGGACTAACTGCTGTGCTTTCGTTGGCAATGATCACGCCTTGTTTTTCG
GCAGAGGGGTAGCGGTACGATATATAGAGTATTTTGGACGAAATGCCCAA
CGCCGGTCTATGCGTGATTGTGGTGGAGAATGGGAAATGGGAAATCGGTG
GTCAGAACTACTTGAGTTGGTGAATGGTCGCTGGTGTAGCAACGTATGAG
ATTATATAGCTGTTGCGCGATGTTTTCGGTTGCGACGGCAGACGGACGCC
CCCCGGCCGTCCTTGCTTTCTTACCTGTACATGCGACAAGTAGTGCGCTG
CGCTGCGCGGCAAAGGTGAAGGTCGGGTGGTTTTTGGCATTGCGCGAGGG
GACCGGCGAATGGTCGGGGAGTTTTTTTTAGTTTATTATTATTTTGTGTG
TGCCGTGTGGGCTGATGAGAGAGGGACCTCAGTCAACGAGTTCGAGTTGC
GCTGCTCCCCAACCGGGGGAGGTGGTAACATACAGTACATATTCGCGCTC
TTTTTAGAATTTTTTTTCTTACTACAAGTTTTGTTGCTCACTATGACTCA
ATATTCGTGTAGGGGGTCATTTCGGTTTGGGTTAGGGGTAGTAGTTACAG
AAATTTCTAGCATTTTCTGCAAACTCACGTCTGTACAATTGTCAAGTATA
GTACGATCAAAATATACGAGATCCCTCTAAAACAACTACCTCGGTTTATA
CACATAACGGAAGCGCTTCACACCCAATGTTTTACTTCCTAGCACCGTAG
AGGAGCAAGGTCAATGGTTGGCGAGGTCATGACCCCCCCCCCCCCCCCCC
CCCCCCCGCGCGCGCGCCCACCTCATACATCCCCCCCTCCCCCCCCCCTG
GCCTTCGGTGGGATGGACTAAAGCAGTTGTACAATTTGGAAACGAGGCCG
AAGAGCGACCCGGCTTTTGAAGCGCTGGGTAGCATGGATGAGCTCAACGC
GTCTATCGCGCTGGCCGCCGAGCATTCTGCGCTGGCGGGTAACGGTCTTT
CCGAGATGCTGTTGGCCATCCAGTCCCTGCTGATCGACGCGTCGGCGCTG
GTAGCTACTCCTCGCGACACCTCCTCTGCACGCAAGATCAATCGTACGGG
TTTCCCCACGTGGTGCACGGATCATCTTGAGGTACATATGACCCCCCCCT
ATTTAGGGTATATATCTCTCGTGCTTCGTTATAGCGTAAAAACGGAGGCT
TGAGAGTATCGTTGGTGTCGTTATTGCCAGAAGATTAGATATCGTTCTTT
GTCCGTCAACTGTTAACAATAGAGGCACCACTTGAATTGAAATGGAGCTC
CCCGAATTGTTGGATCTCTCTCGCACGTGGATGAACACATTCACTACGAA
TGGCACGCGAAAGGAGGGGAGCCGTTCTCTCGTGGTTCATTGTAGGCCGA
GGACAGCAGAGGCAGCGGTCGGTGCTCCGTAGCACCCGTACTTCGTATAT
TATTAGCGGGTCAAATTTTGCGGTTCCCTCGTAAGCATTCACAAACATGC
CTTAATATTCGTCAAACCCCCCTCCTTTTATCCTACCAGTAATATAGGCA
CCACGGCGTTGCCCGTGCAATGCACGCTCGAACGGTGAGTGGAATTCTAC
TCCAAACCAACCCAACCCAACCCAACTCTAAAATAGACAACTCCGTGCAA
TTTTTTTTTTCTTGTTTGACCGACAGGCGTGCATTGACGAGTTGGACGCC
AAGACGCCTCCTTTGAAAACTTTTATCTTGCCCGGAGGGGGGCTGGCGGC
CTCTCACCTGCACCTGGCGCGGTGCGTCTGTAGGCGCGCGGAGCGGAGCC
TGCAGCCGCTCCTGGGGCCGGAGCAGGGCGTGGAGGAGGTGGCTAGGTCA
GGTTTTTATATGGCACAAAAACAAACGGCGTTGTTTAAAATTGGGAAAGG
GAGGGCGGGCTGCTATGTTCATGGCAGTTTCGTTTTGCTAGGAACAGTAC
AAAACAAATGCGCGGGAAATCGTAATTTTTGGCAATATTTTGTTTGTTGG
CATCGAGCGGCGCCAAAATATCGGGGCTTAACCCACCTTTCTACAATGAT
GGCACTGTATATTCTCTTGCCAGTGACGATTTTGTATTTTTTTTGTCTGT
TTTCCAAAAATGAGTTTTGTTGATGTTGTCGGTTGGTAGTGCTGGTGGTA
TTGATGTTGTAGGTGTTGCTGTAAATATCGATCGTCAACGATTGGAGCGA
CCGAATCGTAGCTGTAAAGTCAGAGATCTTTTTTCGTTGGGCGGTTGTTG
GTACTTTTTTGTTCGCAAATTTGTCGCGAGATATGTTACTGATCGTGCAG
GCGTCGGCCTCCTGAACCCTCTTGTTGTGCTTTGTTCGTCCAAGAAAGAA
TCATCGAAAGTTGTGTTGTTGGAAATCCGGAGGTGTTGATGTCGTAGCGA
TGATGTGATTGTTTTATATAAGTTACAAAAAAAATGTTGTCGTATTTTTC
TATTTCTTTGCCCTTTGTTTGTGTTCAATTTGCGATTTGATGCTATTATT
ATGTAGCTTGTGACCACGGAATTTCTTATCTCTCTAGGACGGAAGAATCA
GTACATACTCTGAGTATGCTATTATTATACTGGATGTCGTAGGGTAGGAA
GGACGATTTTTATTGTGAAGACAACATCTACAGAGTACATGTTTATCGTC
CTCGTCCCTTCTACTACAGTGTTTATTTTGCCCTGATTTTTACGTAGTTA
CAATACGCGGGGCCACAGACCGGACCCCCCCCCCCCTCCGTTTTCGTACC
TCTCATTTTTTTTTCGCGCGTCTGGTGCGGCACACAAGCACCCTCGCTCC
CCCTCTCTTGGGAACCGTCTTATTGGCATGTCACGACAAATACATTCCTG
GGGAAGGTATCGCCAAACCTTCGGTATCAAATACTGGTTGTATAGAGAGC
TGCAATAGTCGGTTCACCAGGGTTTTTCCCGGTGAATCTTCAGCAATGTA
CAGAGTCTCAGGTCACACATAACAAGTACCCCCCCCCTACGTATGCACGA
TTTAGGTACGTCAACCGCCTAAGCGATCTTCTTTTCGCAGCCGCGAGGTA
TGCCTCCATGGCGAATGGAAAACCCGAACGACCGTGGATGAAGCTTCCCT
CGCCGGAGACCCCGGCCAGCTCGGACTCTTCGCCGCCGGACACGGCCACC
GGAAATGAAGCGGCCACGACCGACGGAGAGGTCGCTTCGGTCGAACCCAC
CGAGAACGGCGTGTCGCCCGAAACAAAGGGAGGCTAACGTGATAAGAGTA
GCGAAGGACGAGGTAGAGAGAGAGAGAGAGAAATAAGCAGAGGCGTAGGG
CCGGTGCGTTATGATAGTAGGAAGGGGGTGTGTGCTGTGCTGTCTTTGTG
TGATTGGAAGTGATGGCAACTTAACCTGGGGTTTTGTTTTTTGAGCCCTC
TGGGGGTACATTAGGTTTTTGCGGAATAGGCTCGTATTGATATTATTGTG
AAACGTTACGATGTCGTCGTGTTGCTGTTGTTTTTTTTTTTTTTTGGCGG
TGGCGTGTTTGCCGTTGGCCTTGTTCGTGAATGTCAACACGAAGTCGAGG
CGCCGGGGTGATGCCTGCGTTGGGTCCTGACGTTCATTTTTTTTTACTGG
GACGTGTGTCGTGGGCCTTGTGTGCGGACGCAACAAGAGGTCGAAGCCGG
GGTGATGTTGCGTTATTTTTTGGTACTGACGTGATTTTTTGGGTTATTGT
GTTTGGACGCGTTCATGTCGCGGGACGATTTAGGACGGAGGATAGAATAG
TAGGTGCGTTCGTGTATTTATTTTAGTTTTGGGTGTTTCGTAAACGCATG
GTGGTTGCGGCGACGTCGTCGTTTGGCGCCGCCCGAGTTGCGCGTGGGTT
CGATTCGGCCCACAATGCTTTGTTGGCCTACAGTCGGGTTTCACCTTGGA
CTGTGTATGTGTTCGAGTTTGCGAGAGCCCCTCGAAAATTGATTTCGTCT
TTTCTTAGTGCGGGGGGGGCAGGTGTTGTCGCGCTCAGTTTTGATGCATG
TAGTACATGGAATACCCTTATTTTGTTACATTGTGTACCTCTTTTGGCCT
TGTTATGTTAGTCTAACATGTCGTTCGATGTAACAAAATAAAAATAAATA
CAGATTCAGTTTTTGAGGTCGGTCGCTGTGGCGGGCTCTTCAGACTGTCA
AAACTG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig113:199744..208149-

>mRNA_D-herbacea_F_contig113.1008.1 ID=mRNA_D-herbacea_F_contig113.1008.1|Name=mRNA_D-herbacea_F_contig113.1008.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1968bp|location=Sequence derived from alignment at D-herbacea_F_contig113:199744..208149- (Desmarestia herbacea DmunF female)
ATGCACCGCTGCTTGTCGCGCTCCCTGCTAGCGAAGCGGGATACGTTTGC
GGTGAGGGGTCTCCTTCCCAACCTCGGAGTATCTATGATGCACCGCTGCT
TGTCGCGCTCCCTGCTAGCGAAGCGGGATACGTTTGCGGTGAGGGGTCTC
CTTCCCAACCTCGGAGTATCTATGCCTCGCTCGCACGATATGACGCTCGC
TACGGCGGTGGTAGGCGGCGGGGTTGGCGTCGGTTACATTGCGTTCCGGC
TGTTTTCGCAAAGGCGAGATGGGGGCAGGGACAGGGTACCGGTGGAAGGG
GGGGGGCAACGCGAGGACTACCCGATGCTAGACATGGCGGATATCGCGAG
GAGAGCCGTTCCGAGGAAGAAATCATTCCTCTACACCAGGCGTGGAGACA
AGGGAACTTCGCAGCCTCGCTCGCACGATATGACGCTCGCTACGGCGGTG
GTAGGCGGCGGGGTTGGCGTCGGTTACATTGCGTTCCGGCTGTTTTCGCA
AAGGCGAGATGGGGGCAGGGACAGGGTACCGGTGGAAGGGGGGGGGCAAC
GCGAGGACTACCCGATGCTAGACATGGCGGATATCGCGAGGAGAGCCGTT
CCGAGGAAGAAATCATTCCTCTACACCAGGCGTGGAGACAAGGGAACTTC
GCAGTTGTACAATTTGGAAACGAGGCCGAAGAGCGACCCGGCTTTTGAAG
CGCTGGGTAGCATGGATGAGCTCAACGCGTCTATCGCGCTGGCCGCCGAG
CATTCTGCGCTGGCGGGTAACGGTCTTTCCGAGATGCTGTTGGCCATCCA
GTCCCTGCTGATCGACGCGTCGGCGCTGGTAGCTACTCCTCGCGACACCT
CCTCTGCACGCAAGATCAATCGTACGGGTTTCCCCACGTGGTGCACGGAT
CATCTTGAGTTGTACAATTTGGAAACGAGGCCGAAGAGCGACCCGGCTTT
TGAAGCGCTGGGTAGCATGGATGAGCTCAACGCGTCTATCGCGCTGGCCG
CCGAGCATTCTGCGCTGGCGGGTAACGGTCTTTCCGAGATGCTGTTGGCC
ATCCAGTCCCTGCTGATCGACGCGTCGGCGCTGGTAGCTACTCCTCGCGA
CACCTCCTCTGCACGCAAGATCAATCGTACGGGTTTCCCCACGTGGTGCA
CGGATCATCTTGAGGCGTGCATTGACGAGTTGGACGCCAAGACGCCTCCT
TTGAAAACTTTTATCTTGCCCGGAGGGGGGCTGGCGGCCTCTCACCTGCA
CCTGGCGCGGTGCGTCTGTAGGCGCGCGGAGCGGAGCCTGCAGCCGCTCC
TGGGGCCGGAGCAGGGCGTGGAGGAGGTGGCTAGGCGTGCATTGACGAGT
TGGACGCCAAGACGCCTCCTTTGAAAACTTTTATCTTGCCCGGAGGGGGG
CTGGCGGCCTCTCACCTGCACCTGGCGCGGTGCGTCTGTAGGCGCGCGGA
GCGGAGCCTGCAGCCGCTCCTGGGGCCGGAGCAGGGCGTGGAGGAGGTGG
CTAGGTACGTCAACCGCCTAAGCGATCTTCTTTTCGCAGCCGCGAGGTAT
GCCTCCATGGCGAATGGAAAACCCGAACGACCGTGGATGAAGCTTCCCTC
GCCGGAGACCCCGGCCAGCTCGGACTCTTCGCCGCCGGACACGGCCACCG
GAAATGAAGCGGCCACGACCGACGGAGAGGTCGCTTCGGTCGAACCCACC
GAGAACGGCGTGTCGCCCGAAACAAAGGGAGGCTAAGTACGTCAACCGCC
TAAGCGATCTTCTTTTCGCAGCCGCGAGGTATGCCTCCATGGCGAATGGA
AAACCCGAACGACCGTGGATGAAGCTTCCCTCGCCGGAGACCCCGGCCAG
CTCGGACTCTTCGCCGCCGGACACGGCCACCGGAAATGAAGCGGCCACGA
CCGACGGAGAGGTCGCTTCGGTCGAACCCACCGAGAACGGCGTGTCGCCC
GAAACAAAGGGAGGCTAA
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