prot_D-herbacea_F_contig113.1006.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig113.1006.1
Unique Nameprot_D-herbacea_F_contig113.1006.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length245
Homology
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: D7G5E6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5E6_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 3.820e-99
Identity = 168/244 (68.85%), Postives = 194/244 (79.51%), Query Frame = 0
Query:    1 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGGGMYAF 244
            M +LTAISVREGE ALA +P  VG+MQ L+E++FAYTSL D+ES F QLL +S G+ +EN  M ALLS VR+EVTQ ++ILLALKRWIRVQVPKIEDGNNFGVSVQLDVAK I+    P++  L E+PGYFESRASA +KI  K SKE KTS S+SKDTGGKDG  XXXXXXXX             S+ HL+ALDV+WFVSLHHTLL ARD++V+A DMIEKNMEKLLRPKGTNT GGGMY+F
Sbjct:    1 MSSLTAISVREGEVALANLPEQVGKMQALLEAEFAYTSLADIESGFKQLLTSSGGSATENANMGALLSTVRNEVTQTMSILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKGIDELTTPVASSLGEMPGYFESRASAWDKIGNKKSKESKTSSSASKDTGGKDGDSXXXXXXXXTEEKTSESSFAPDSANHLIALDVKWFVSLHHTLLRARDSLVLAADMIEKNMEKLLRPKGTNTQGGGMYSF 244          
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A835YYY9_9STRA (Proteasome activator pa28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY9_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.130e-44
Identity = 99/245 (40.41%), Postives = 130/245 (53.06%), Query Frame = 0
Query:    1 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKG-TNTHGGGMYAF 244
            M+ L   S  EGEAA   VP  V  + + + S FAYT L  +ES FT  +A +    + N ++  LL AV+ ++  ++NILLAL RWI+V VP IEDGNNFGV VQ +VAK I   +  +    D+LP Y E RA A EK+A K     K S S S  TGGK+G                           LV +DVR +V LH ++  ARD V+   DM+EKN+ K+  PKG    HG   + F
Sbjct:    1 MEALKEQSKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGRHGAPGFMF 245          
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A8K1CBJ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBJ1_PYTOL)

HSP 1 Score: 125 bits (315), Expect = 1.020e-31
Identity = 82/243 (33.74%), Postives = 123/243 (50.62%), Query Frame = 0
Query:    1 MDTLTAISVREGEAAL-AAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGGGMY 242
            M+    +  RE EA L + +   +  +Q+L+ ++F   ++ DV +  T  +     T  ++ ++ AL+ AV   +  AL+    L +WI + VPK+ DGNNFGV VQL V K I+     + K  D LP Y   RA+A EK+  K SKE   + + ++ TGGK+G                           +VA+DV+WF +L  TL   RDA  I  D +EKN +K+LRP+     G GMY
Sbjct:    1 MEAYKELVTREAEALLQSGITQRLEEVQKLLVAEFQSRAIADVRATSTTSMQQQLPTIQQHPQLPALVGAVATHLEHALSDFQKLSQWISLLVPKVADGNNFGVEVQLIVLKEIKDATDKLQKAWDSLPDYHSQRATAIEKLNDKRSKEKTVTTTVTESTGGKEGDEKKSVVSSVDKESSTSAAPVDDWIAQVVAIDVKWFYNLARTLEIVRDAYAIVYDRVEKNKDKILRPRNQERAGYGMY 243          
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A5D6XIL9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIL9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 3.080e-30
Identity = 78/235 (33.19%), Postives = 112/235 (47.66%), Query Frame = 0
Query:    1 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTN 235
            MD   A    + E  LA  P  V  +Q LV   FA      V +      A S G    N  + AL + V DE+   L  L  L RW+++ VPK+ DGNNFGV VQ    + ++   A   K  D L  Y   RA+A+EK+  K +KE  TS +++  TGGKD                         +  +VA+DV+W+ +L  TL   RD   +  D++EKN +K+L P+G++
Sbjct:    1 MDVYRATVSADAERTLAEFPRRVEHVQALVTQHFAQRQPSAVRATLAAAAAASSGQVRGNASLAALAAVVADEIELVLAALAQLSRWLQLLVPKVADGNNFGVEVQKLALEHLKESAAGWQKHWDALAEYHSQRAAAAEKLNDKVAKEKATSATTTATTGGKDADETKTVTMTSEKETATTAAPVEDWAAFVVAVDVKWYFNLARTLEAVRDQYAVTFDIVEKNRDKILLPRGSS 235          
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: D0MSD0_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MSD0_PHYIT)

HSP 1 Score: 117 bits (294), Expect = 1.300e-28
Identity = 73/228 (32.02%), Postives = 110/228 (48.25%), Query Frame = 0
Query:   12 GEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGG 239
            G A L+ +P  V ++Q L+E      +   + ++F Q +  +    S N E+ ALL+ V DEV Q ++ +  L+ WI+VQVPK+EDGNNFGV VQ      ++  +    K  D +  Y  +RA+A EK+  K S E           GGKDG                       +   +V +D++W+ +L   L G RD   +  D+I KN EK+  P+G N   G
Sbjct:   12 GAALLSELPQRVAQVQALLEQHAGERTPSKLRTKFAQAVLAAPAAVSSNGEVQALLTVVGDEVAQLISTIQQLQVWIQVQVPKVEDGNNFGVEVQKYAFVHLKEALERWQKTWDSMADYSSARATAVEKLNAKASSETSXXXXXXSSKGGKDGDEEKSVTAKVEKQSNAGTKAPEDAIAAVVEIDIKWYFNLARALEGVRDQYAVTEDVIFKNKEKIELPRGKNDRAG 239          
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: K3WA13_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA13_GLOUD)

HSP 1 Score: 117 bits (294), Expect = 1.300e-28
Identity = 71/235 (30.21%), Postives = 114/235 (48.51%), Query Frame = 0
Query:    1 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTN 235
            MD       ++    +  +P  +  +  LV+  F   +   V +   Q +  +RG    +  + AL++ V DE+ Q L +L  L +WI++ VPKI DGNNFGV VQ      ++  +A   K  D L  Y+  RA+A EK+  K +KE   S + +  TGGKDG                          ++VA+D++W+ +L  TL   RD   +  D+IEKN +K++ P+G +
Sbjct:    1 MDAYRTSVAQDAHKRIEELPQRLAHVHALVQQHFQARTPSAVRATLKQSVTATRGKVDASATLDALIAVVGDEIEQVLTVLAQLSQWIQLLVPKIADGNNFGVEVQKLAYVHVKESIATWQKQWDALADYYNQRATAVEKVNDKIAKESSKSTTVTATTGGKDGDENKSVTTSLDKETATSGTVVDDWVSYIVAVDLKWYFNLARTLEAIRDQYAVTADIIEKNKDKIVLPRGNS 235          
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A2D4BJC1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJC1_PYTIN)

HSP 1 Score: 115 bits (289), Expect = 7.270e-28
Identity = 82/245 (33.47%), Postives = 116/245 (47.35%), Query Frame = 0
Query:    1 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKD---VESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGGGMY 242
            M+    +  RE EA L    G V R+ QL +S  A+ +++    V +     L            +T L+    D V QAL    AL +WI + +PK+ DGNNFGV VQL V K ++     + K  D LP Y   RA+  EK+ +  SKE  T+ + +  TG K+G                          ++VA+DV+W+  L   L   RDA  IA D IEKN +K+L+P+G    G GMY
Sbjct:    1 MEEYKQLVTREAEA-LVEGGGIVQRLSQLQQSLQAHCAVRQPSQVRATVDAALRQQLPRVGLQPTLTQLVGVTSDHVEQALRXFQALXQWISLLLPKVADGNNFGVEVQLVVMKELKETSDKLQKAWDALPDYHSQRATVLEKLNEXLSKETSTTNTVTATTGXKEGDEKKTVVATVGKETATAQPVVEDWIANVVAIDVKWYFHLARVLELVRDAYAIAFDRIEKNKDKILKPRGQERSGYGMY 244          
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A6A3F8F5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F8F5_9STRA)

HSP 1 Score: 115 bits (288), Expect = 9.980e-28
Identity = 74/228 (32.46%), Postives = 106/228 (46.49%), Query Frame = 0
Query:   12 GEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGG 239
            G A L+ +P  V  +Q LV+   A  S   V ++F Q +  +      N  + +LL+ V DEV Q L+++  L+ WI++QVPK+EDGNNFGV VQ      ++  +    K  D L  Y  +RASA EK+  K S E              DG                       +   +V LDV+W+ +L   L G RD   +  D+I KN EK+  P+G N   G
Sbjct:   12 GAALLSELPQRVAHVQALVQQHAAERSASAVRAKFAQAVLAAPSAVGSNGNVQSLLAVVGDEVAQLLSVIAQLQLWIQLQVPKVEDGNNFGVEVQKYAFVQLKEALDKWQKTWDSLADYSSARASAVEKLNAKASSETXXXXXXXXXXXXXDGDEEKSVTAKVDKQSNNGSNAAEDAVAAVVELDVKWYFNLVRALEGVRDQYAVTSDLISKNKEKIELPRGKNDRAG 239          
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A662Y6D6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6D6_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.400e-27
Identity = 75/239 (31.38%), Postives = 110/239 (46.03%), Query Frame = 0
Query:    1 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGG 239
            MD         G+A L  +P  V ++Q L++   A  S   V + F Q +  +      N ++  LL+   D+V   ++ L  L+ WI++QVPK+EDGNNFGV VQ      ++  +    K  D L  Y  SRA+A+EK+  K S E          TGGKDG                       +   +V LDV+W+ +L   L G RD   +  D+I KN +K+  P+G N   G
Sbjct:    1 MDAYKTSVAAAGDALLLELPQRVAQVQTLLQQHAAERSPSRVRAAFAQQVLATPTAVGANGQVQGLLATTSDQVALVMDALQLLQLWIQLQVPKVEDGNNFGVEVQKYAFTQLKEALEKWQKAWDALADYSSSRATAAEKLNAKLSSESXXXXXXXXXTGGKDGDEQKSVTAKVDKQGSTGAQAGEDALAAVVELDVKWYFNLVRALEGVRDQYAVTADVIAKNKDKISLPRGNNDRAG 239          
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A225WBW4_9STRA (Proteasome activator subunit 1 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225WBW4_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.500e-26
Identity = 71/226 (31.42%), Postives = 106/226 (46.90%), Query Frame = 0
Query:   14 AALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGG 239
            A L+ +P    ++Q LV+      S   + ++F Q +  +      N E+ ALL+ V DEV Q ++ L  L+ WI++QVPK+EDGNNFGV VQ      ++  +    K  D +  Y  +RA+  EK+  K S E           GGKDG                       +   +V LD++W+ +L   L G RD   +  D+I KN EK+  P+G N   G
Sbjct:   14 ALLSELPQRGAKVQTLVQQHAGERSPSQLRTKFAQNVLAAPAAVGSNGEVQALLAVVGDEVAQLMSALQLLQLWIQLQVPKVEDGNNFGVEVQKYAYVHLKEALEKWQKTWDSVADYSSARATTVEKLNAKASSETSXXXXXXXSKGGKDGDEEKSVTAKVEKQSNTGNQAPEDAVAAVVELDIKWYFNLARALEGVRDQYAVTEDIITKNKEKIELPRGKNDRAG 239          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5E6_ECTSI3.820e-9968.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YYY9_9STRA1.130e-4440.41Proteasome activator pa28 n=1 Tax=Tribonema minus ... [more]
A0A8K1CBJ1_PYTOL1.020e-3133.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XIL9_9STRA3.080e-3033.19Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
D0MSD0_PHYIT1.300e-2832.02Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
K3WA13_GLOUD1.300e-2830.21Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BJC1_PYTIN7.270e-2833.47Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A6A3F8F5_9STRA9.980e-2832.46Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A662Y6D6_9STRA1.400e-2731.38Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A225WBW4_9STRA1.500e-2631.42Proteasome activator subunit 1 n=3 Tax=Phytophthor... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003186Proteasome activator PA28, C-terminal domainPFAMPF02252PA28_betacoord: 58..145
e-value: 2.4E-19
score: 69.5
NoneNo IPR availablePANTHERPTHR10660:SF2LD45860Pcoord: 46..237
IPR009077Proteasome activator PA28PANTHERPTHR10660PROTEASOME REGULATOR PA28coord: 46..237
IPR036252Proteasome activator superfamilySUPERFAMILY47216Proteasome activatorcoord: 46..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig113contigD-herbacea_F_contig113:179606..184305 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig113.1006.1mRNA_D-herbacea_F_contig113.1006.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig113 178924..184466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig113.1006.1 ID=prot_D-herbacea_F_contig113.1006.1|Name=mRNA_D-herbacea_F_contig113.1006.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=245bp
MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLL
ATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNN
FGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVK
TSGSSSKDTGGKDGDSSKTSESSSTEEKSVESSSAPESSLHLVALDVRWF
VSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGGGMYAF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036252Proteasome_activ_sf
IPR009077Proteasome_activ_PA28
IPR003186PA28_C