mRNA_D-herbacea_F_contig113.1006.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig113.1006.1
Unique NamemRNA_D-herbacea_F_contig113.1006.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: D7G5E6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5E6_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 4.890e-95
Identity = 168/244 (68.85%), Postives = 194/244 (79.51%), Query Frame = 3 
Query:  162 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGGGMYAF 893
            M +LTAISVREGE ALA +P  VG+MQ L+E++FAYTSL D+ES F QLL +S G+ +EN  M ALLS VR+EVTQ ++ILLALKRWIRVQVPKIEDGNNFGVSVQLDVAK I+    P++  L E+PGYFESRASA +KI  K SKE KTS S+SKDTGGKDG  XXXXXXXX             S+ HL+ALDV+WFVSLHHTLL ARD++V+A DMIEKNMEKLLRPKGTNT GGGMY+F
Sbjct:    1 MSSLTAISVREGEVALANLPEQVGKMQALLEAEFAYTSLADIESGFKQLLTSSGGSATENANMGALLSTVRNEVTQTMSILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKGIDELTTPVASSLGEMPGYFESRASAWDKIGNKKSKESKTSSSASKDTGGKDGDSXXXXXXXXTEEKTSESSFAPDSANHLIALDVKWFVSLHHTLLRARDSLVLAADMIEKNMEKLLRPKGTNTQGGGMYSF 244
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BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A835YYY9_9STRA (Proteasome activator pa28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY9_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.010e-41
Identity = 99/245 (40.41%), Postives = 130/245 (53.06%), Query Frame = 3 
Query:  162 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKG-TNTHGGGMYAF 893
            M+ L   S  EGEAA   VP  V  + + + S FAYT L  +ES FT  +A +    + N ++  LL AV+ ++  ++NILLAL RWI+V VP IEDGNNFGV VQ +VAK I   +  +    D+LP Y E RA A EK+A K     K S S S  TGGK+G                           LV +DVR +V LH ++  ARD V+   DM+EKN+ K+  PKG    HG   + F
Sbjct:    1 MEALKEQSKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGRHGAPGFMF 245
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BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A8K1CBJ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBJ1_PYTOL)

HSP 1 Score: 126 bits (317), Expect = 1.140e-29
Identity = 82/243 (33.74%), Postives = 123/243 (50.62%), Query Frame = 3 
Query:  162 MDTLTAISVREGEAAL-AAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGGGMY 887
            M+    +  RE EA L + +   +  +Q+L+ ++F   ++ DV +  T  +     T  ++ ++ AL+ AV   +  AL+    L +WI + VPK+ DGNNFGV VQL V K I+     + K  D LP Y   RA+A EK+  K SKE   + + ++ TGGK+G                           +VA+DV+WF +L  TL   RDA  I  D +EKN +K+LRP+     G GMY
Sbjct:    1 MEAYKELVTREAEALLQSGITQRLEEVQKLLVAEFQSRAIADVRATSTTSMQQQLPTIQQHPQLPALVGAVATHLEHALSDFQKLSQWISLLVPKVADGNNFGVEVQLIVLKEIKDATDKLQKAWDSLPDYHSQRATAIEKLNDKRSKEKTVTTTVTESTGGKEGDEKKSVVSSVDKESSTSAAPVDDWIAQVVAIDVKWFYNLARTLEIVRDAYAIVYDRVEKNKDKILRPRNQERAGYGMY 243
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BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A5D6XIL9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIL9_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.490e-28
Identity = 78/235 (33.19%), Postives = 112/235 (47.66%), Query Frame = 3 
Query:  162 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTN 866
            MD   A    + E  LA  P  V  +Q LV   FA      V +      A S G    N  + AL + V DE+   L  L  L RW+++ VPK+ DGNNFGV VQ    + ++   A   K  D L  Y   RA+A+EK+  K +KE  TS +++  TGGKD                         +  +VA+DV+W+ +L  TL   RD   +  D++EKN +K+L P+G++
Sbjct:    1 MDVYRATVSADAERTLAEFPRRVEHVQALVTQHFAQRQPSAVRATLAAAAAASSGQVRGNASLAALAAVVADEIELVLAALAQLSRWLQLLVPKVADGNNFGVEVQKLALEHLKESAAGWQKHWDALAEYHSQRAAAAEKLNDKVAKEKATSATTTATTGGKDADETKTVTMTSEKETATTAAPVEDWAAFVVAVDVKWYFNLARTLEAVRDQYAVTFDIVEKNRDKILLPRGSS 235
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BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: K3WA13_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA13_GLOUD)

HSP 1 Score: 119 bits (298), Expect = 5.010e-27
Identity = 71/235 (30.21%), Postives = 114/235 (48.51%), Query Frame = 3 
Query:  162 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTN 866
            MD       ++    +  +P  +  +  LV+  F   +   V +   Q +  +RG    +  + AL++ V DE+ Q L +L  L +WI++ VPKI DGNNFGV VQ      ++  +A   K  D L  Y+  RA+A EK+  K +KE   S + +  TGGKDG                          ++VA+D++W+ +L  TL   RD   +  D+IEKN +K++ P+G +
Sbjct:    1 MDAYRTSVAQDAHKRIEELPQRLAHVHALVQQHFQARTPSAVRATLKQSVTATRGKVDASATLDALIAVVGDEIEQVLTVLAQLSQWIQLLVPKIADGNNFGVEVQKLAYVHVKESIATWQKQWDALADYYNQRATAVEKVNDKIAKESSKSTTVTATTGGKDGDENKSVTTSLDKETATSGTVVDDWVSYIVAVDLKWYFNLARTLEAIRDQYAVTADIIEKNKDKIVLPRGNS 235
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BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: D0MSD0_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MSD0_PHYIT)

HSP 1 Score: 119 bits (297), Expect = 6.900e-27
Identity = 77/241 (31.95%), Postives = 115/241 (47.72%), Query Frame = 3 
Query:  156 DNMDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGG 878
            D   T+TA     G A L+ +P  V ++Q L+E      +   + ++F Q +  +    S N E+ ALL+ V DEV Q ++ +  L+ WI+VQVPK+EDGNNFGV VQ      ++  +    K  D +  Y  +RA+A EK+  K S E           GGKDG                       +   +V +D++W+ +L   L G RD   +  D+I KN EK+  P+G N   G
Sbjct:    3 DYKKTVTAA----GAALLSELPQRVAQVQALLEQHAGERTPSKLRTKFAQAVLAAPAAVSSNGEVQALLTVVGDEVAQLISTIQQLQVWIQVQVPKVEDGNNFGVEVQKYAFVHLKEALERWQKTWDSMADYSSARATAVEKLNAKASSETSXXXXXXSSKGGKDGDEEKSVTAKVEKQSNAGTKAPEDAIAAVVEIDIKWYFNLARALEGVRDQYAVTEDVIFKNKEKIELPRGKNDRAG 239
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BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A6A3F8F5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F8F5_9STRA)

HSP 1 Score: 116 bits (290), Expect = 6.390e-26
Identity = 76/239 (31.80%), Postives = 108/239 (45.19%), Query Frame = 3 
Query:  162 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGG 878
            MD         G A L+ +P  V  +Q LV+   A  S   V ++F Q +  +      N  + +LL+ V DEV Q L+++  L+ WI++QVPK+EDGNNFGV VQ      ++  +    K  D L  Y  +RASA EK+  K S E              DG                       +   +V LDV+W+ +L   L G RD   +  D+I KN EK+  P+G N   G
Sbjct:    1 MDEYKKSVTAAGAALLSELPQRVAHVQALVQQHAAERSASAVRAKFAQAVLAAPSAVGSNGNVQSLLAVVGDEVAQLLSVIAQLQLWIQLQVPKVEDGNNFGVEVQKYAFVQLKEALDKWQKTWDSLADYSSARASAVEKLNAKASSETXXXXXXXXXXXXXDGDEEKSVTAKVDKQSNNGSNAAEDAVAAVVELDVKWYFNLVRALEGVRDQYAVTSDLISKNKEKIELPRGKNDRAG 239
[Close]
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A2D4BJC1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJC1_PYTIN)

HSP 1 Score: 116 bits (290), Expect = 6.540e-26
Identity = 82/245 (33.47%), Postives = 116/245 (47.35%), Query Frame = 3 
Query:  162 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKD---VESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGGGMY 887
            M+    +  RE EA L    G V R+ QL +S  A+ +++    V +     L            +T L+    D V QAL    AL +WI + +PK+ DGNNFGV VQL V K ++     + K  D LP Y   RA+  EK+ +  SKE  T+ + +  TG K+G                          ++VA+DV+W+  L   L   RDA  IA D IEKN +K+L+P+G    G GMY
Sbjct:    1 MEEYKQLVTREAEA-LVEGGGIVQRLSQLQQSLQAHCAVRQPSQVRATVDAALRQQLPRVGLQPTLTQLVGVTSDHVEQALRXFQALXQWISLLLPKVADGNNFGVEVQLVVMKELKETSDKLQKAWDALPDYHSQRATVLEKLNEXLSKETSTTNTVTATTGXKEGDEKKTVVATVGKETATAQPVVEDWIANVVAIDVKWYFHLARVLELVRDAYAIAFDRIEKNKDKILKPRGQERSGYGMY 244
[Close]
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A662Y6D6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6D6_9STRA)

HSP 1 Score: 115 bits (289), Expect = 8.780e-26
Identity = 75/239 (31.38%), Postives = 110/239 (46.03%), Query Frame = 3 
Query:  162 MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGG 878
            MD         G+A L  +P  V ++Q L++   A  S   V + F Q +  +      N ++  LL+   D+V   ++ L  L+ WI++QVPK+EDGNNFGV VQ      ++  +    K  D L  Y  SRA+A+EK+  K S E          TGGKDG                       +   +V LDV+W+ +L   L G RD   +  D+I KN +K+  P+G N   G
Sbjct:    1 MDAYKTSVAAAGDALLLELPQRVAQVQTLLQQHAAERSPSRVRAAFAQQVLATPTAVGANGQVQGLLATTSDQVALVMDALQLLQLWIQLQVPKVEDGNNFGVEVQKYAFTQLKEALEKWQKAWDALADYSSSRATAAEKLNAKLSSESXXXXXXXXXTGGKDGDEQKSVTAKVDKQGSTGAQAGEDALAAVVELDVKWYFNLVRALEGVRDQYAVTADVIAKNKDKISLPRGNNDRAG 239
[Close]
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Match: A0A225WBW4_9STRA (Proteasome activator subunit 1 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225WBW4_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.110e-24
Identity = 71/226 (31.42%), Postives = 106/226 (46.90%), Query Frame = 3 
Query:  201 AALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLLATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVKTSGSSSKDTGGKDGXXXXXXXXXXXXXXXXXXXXXXXSSLHLVALDVRWFVSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGG 878
            A L+ +P    ++Q LV+      S   + ++F Q +  +      N E+ ALL+ V DEV Q ++ L  L+ WI++QVPK+EDGNNFGV VQ      ++  +    K  D +  Y  +RA+  EK+  K S E           GGKDG                       +   +V LD++W+ +L   L G RD   +  D+I KN EK+  P+G N   G
Sbjct:   14 ALLSELPQRGAKVQTLVQQHAGERSPSQLRTKFAQNVLAAPAAVGSNGEVQALLAVVGDEVAQLMSALQLLQLWIQLQVPKVEDGNNFGVEVQKYAYVHLKEALEKWQKTWDSVADYSSARATTVEKLNAKASSETSXXXXXXXSKGGKDGDEEKSVTAKVEKQSNTGNQAPEDAVAAVVELDIKWYFNLARALEGVRDQYAVTEDIITKNKEKIELPRGKNDRAG 239
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5E6_ECTSI4.890e-9568.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YYY9_9STRA1.010e-4140.41Proteasome activator pa28 n=1 Tax=Tribonema minus ... [more]
A0A8K1CBJ1_PYTOL1.140e-2933.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XIL9_9STRA1.490e-2833.19Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WA13_GLOUD5.010e-2730.21Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D0MSD0_PHYIT6.900e-2731.95Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A6A3F8F5_9STRA6.390e-2631.80Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A2D4BJC1_PYTIN6.540e-2633.47Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A662Y6D6_9STRA8.780e-2631.38Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A225WBW4_9STRA1.110e-2431.42Proteasome activator subunit 1 n=3 Tax=Phytophthor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig113contigD-herbacea_F_contig113:178924..184466 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score301.6
Seed ortholog evalue3.3e-79
Seed eggNOG ortholog2880.D7G5E6
Preferred namePSME3
KEGG rclassRC00062,RC00189,RC00676,RC01052
KEGG koko:K00276,ko:K06698
KEGG ReactionR02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740
KEGG Pathwayko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,ko03050,ko04612,ko05160,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110,map03050,map04612,map05160
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0002039,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0007346,GO:0008047,GO:0008150,GO:0008152,GO:0009893,GO:0009894,GO:0009966,GO:0009968,GO:0009987,GO:0010564,GO:0010604,GO:0010646,GO:0010648,GO:0010941,GO:0010950,GO:0010952,GO:0016504,GO:0016579,GO:0019222,GO:0019538,GO:0023051,GO:0023057,GO:0030162,GO:0030234,GO:0031323,GO:0031325,GO:0031329,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032991,GO:0036211,GO:0042176,GO:0042802,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045862,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051726,GO:0052547,GO:0052548,GO:0060255,GO:0060548,GO:0061133,GO:0061134,GO:0061135,GO:0061136,GO:0065007,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0080090,GO:0097371,GO:0098772,GO:1901564,GO:1901987,GO:1901990,GO:1902494,GO:1902806,GO:1903050,GO:1903362,GO:1905368,GO:1905369,GO:2000045,GO:2001233,GO:2001234,GO:2001236,GO:2001237
EggNOG free text desc.endopeptidase activator activity
EggNOG OGsKOG4470@1,KOG4470@2759
Ec32 ortholog descriptionProteasome activator pa28, C-terminal domain
Ec32 orthologEc-06_010760.1
EC1.4.3.21
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03051,ko04147
Exons4
Model size1578
Cds size735
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig113.1006.1prot_D-herbacea_F_contig113.1006.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig113 179606..184305 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927531.495837-UTR-D-herbacea_F_contig113:178923..1796051622927531.495837-UTR-D-herbacea_F_contig113:178923..179605Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig113 178924..179605 -
1690790218.7375119-UTR-D-herbacea_F_contig113:178923..1796051690790218.7375119-UTR-D-herbacea_F_contig113:178923..179605Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig113 178924..179605 -
1622927531.5802808-UTR-D-herbacea_F_contig113:184305..1844661622927531.5802808-UTR-D-herbacea_F_contig113:184305..184466Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig113 184306..184466 -
1690790218.78253-UTR-D-herbacea_F_contig113:184305..1844661690790218.78253-UTR-D-herbacea_F_contig113:184305..184466Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig113 184306..184466 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927531.5130534-CDS-D-herbacea_F_contig113:179605..1798541622927531.5130534-CDS-D-herbacea_F_contig113:179605..179854Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 179606..179854 -
1690790218.7519975-CDS-D-herbacea_F_contig113:179605..1798541690790218.7519975-CDS-D-herbacea_F_contig113:179605..179854Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 179606..179854 -
1622927531.5381453-CDS-D-herbacea_F_contig113:181919..1821931622927531.5381453-CDS-D-herbacea_F_contig113:181919..182193Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 181920..182193 -
1690790218.7592728-CDS-D-herbacea_F_contig113:181919..1821931690790218.7592728-CDS-D-herbacea_F_contig113:181919..182193Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 181920..182193 -
1622927531.5547388-CDS-D-herbacea_F_contig113:182980..1830611622927531.5547388-CDS-D-herbacea_F_contig113:182980..183061Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 182981..183061 -
1690790218.7664473-CDS-D-herbacea_F_contig113:182980..1830611690790218.7664473-CDS-D-herbacea_F_contig113:182980..183061Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 182981..183061 -
1622927531.56826-CDS-D-herbacea_F_contig113:184174..1843051622927531.56826-CDS-D-herbacea_F_contig113:184174..184305Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 184175..184305 -
1690790218.7741296-CDS-D-herbacea_F_contig113:184174..1843051690790218.7741296-CDS-D-herbacea_F_contig113:184174..184305Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig113 184175..184305 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig113.1006.1

>prot_D-herbacea_F_contig113.1006.1 ID=prot_D-herbacea_F_contig113.1006.1|Name=mRNA_D-herbacea_F_contig113.1006.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=245bp
MDTLTAISVREGEAALAAVPGTVGRMQQLVESKFAYTSLKDVESRFTQLL
ATSRGTCSENTEMTALLSAVRDEVTQALNILLALKRWIRVQVPKIEDGNN
FGVSVQLDVAKSIEHEMAPMSKDLDELPGYFESRASASEKIAKKTSKEVK
TSGSSSKDTGGKDGDSSKTSESSSTEEKSVESSSAPESSLHLVALDVRWF
VSLHHTLLGARDAVVIAGDMIEKNMEKLLRPKGTNTHGGGMYAF*
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mRNA from alignment at D-herbacea_F_contig113:178924..184466-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig113.1006.1 ID=mRNA_D-herbacea_F_contig113.1006.1|Name=mRNA_D-herbacea_F_contig113.1006.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=5543bp|location=Sequence derived from alignment at D-herbacea_F_contig113:178924..184466- (Desmarestia herbacea DmunF female)
CTGTGAGCTGTGAGGTATCCTAGGTTACCACAACCCCACAGATAGCACTA
TCGTACTCGATCCAAGTGCGGCGACATCTAAAGTGGCAGCACTACAGCAC
CCTCTTTGTCCTCCCTAGTCTCGACCTTGTTCATTTCCCCCAGCTGTGCA
TTTGGGACAACATGGACACGCTAACGGCAATTTCTGTGAGGGAAGGGGAG
GCTGCCCTCGCCGCCGTGCCCGGTACGGTTGGGAGGATGCAACAGCTGGT
AGAGTCCAAGTTTGCGTACACCAGCCTCAAGGACGTCGAGAGGTGTGCAA
CGAATTTTTGTCACGGCGTATTGCGTGAACGTGTACAGTGTCGCCCTGAA
AGTGCGTGTACTACATTCATGGTGACCATCGGCGTGCAAGTATCCATTTG
GCGGGATGCTGTTGTATCGTACAAATGGCTGGGTTGTGGTTATTATGTGA
ACGACTGCATTGCAATGCGAGTACTAACCACTACTACTACGACTGCTGTC
GTGCAGTTGCGCTGTTGCACTACTACTTTACTGGGTTTGTCGTCATATGA
TACCTATCTGTAGACCTCTACTATGATGCGAGGATAGCAATGTCTCTGTA
ATACCCTGACGCTATTACTATAGATATGGTATGTCTATCCCGTGGCGGTA
TACGAAGTAAATGTTCTTGCCAACAACTTGACGTAGTTCGAGTCGTACGC
GTACAAGGTACGAGGTGTCAACTGAATGTCTGCAGAATTCTGAATTCGTA
AATTTTGATAAGACAGACCCTTATACTCACTCGTACACCAGCACCGCATG
CCGTGCTTTTATACCGCACGAAAAAACAGTACTCGTACTGCTCGTACTCG
TACTGTCTGATGGGTTTCAATGAGTCATCAAGGGGGCTGTGTGCTGGGTT
TCACAGAGATACAACGGGGTGATCATCGGCAAAAGTGATCGAACGCTCTA
GCCCTAGCCCTAACCCTAGCCCTAACTACAGTAGCCCCAAGAAGGGAACT
CTGTTCGGTTGGTGTGCTTAGCGAAGACTCTATTAATAGGTCGCTGTGTG
GCGGGTGCACGGTGTGTTAAAAAGTGTTTTTAGTCTTTTTTATGCAGGTG
TTTTTAGTTTTTACCGCTGATGCAAACGTTGCGATAGCAGTTTTTGCTCT
ACGGGTAGCTCGTGGTCGTTGTTGTACTCAAGTACCTACGGTCTGGACCG
AGCATGCTATTATACGATATACCTGGTACGCTTTGTGCACTGTCTGTCTG
GTCATCCCTGCCACTGATTGTGGCACTTCTGCGTGGTTTCCAAACATGCT
CTCGCTGTCGATGTTTCTTGTTGTATTTGTTGTTTCCCTCGAACTCTTAC
TCAAATCATGTACTTAATACACCACTGCCCCTAAACTCGGCCCCCAAAAC
GACAGTCGTTTCACGCAGCTGCTGGCGACGTCGCGGGGAACCTGCTCAGA
GAACACAGAGATGACCGCACTTTTATCAGCAGTCAGGTCAGAGAAAAAAT
ACTCGTGGGTCTTCGTTGGAATCATTTCATTCTGTTTTTATTTTGTCGTG
GGTTTTCGGTGTGTATCTACGAGTGTATATCCAGGTACTACTCGTACAAC
AGTAGTAGTATAATAATGAGCAGAGTAAAACCTGGAGAGGGCCTCTTCGG
CTGTGTGATTCCTGGCCCCACATATCATTTGCCATGACGTGCTTGCTTAT
AGCACACTCATTCTAGTTCGCATTTCCTGAGGGTGTGGATTGCAGCTATT
CTCTATTTTCCTTGTTTGGCTAGTCTATACTAGTAGGGGTTGCGCAGTGG
TCTATAGCTAGGGTGTTGCCCTTGTTGGCGGAAGTTGGGGGTTCGGTTCC
CAGTGGCACTTTTCTGTGCCATCTTCCGTCGCGGAAAGCGCGAGAGCGTG
AGTAAGCACAACTCGATGAAAGTCGACGAGGGAAGAAAGTGCTGCACTCT
TGTCGCGATAAAATTGTAGGCACTTACCGTAGTGGGAAGGAGGGAGGAGC
GCCTACTATGTGACCCCGGATCTGAGTTACGAAGAGAGATGGAGCTAGAG
AAAGAATAGAGCGAAGATAATAAATGGGACGAAAAAAAAAAAAAAAAACT
GGCTAGGTGTCGGAGGTTACAGGGGCGACCGTAGACAGGCGGCGGGAATT
GTCAAGTCGACCGTCGGACATCCATCATTGTCAACGAGTCCACTGTGCCT
CGAGCGACATGTTCTCTGGATTTCCACTTGATACAATATCTTCGATTTCC
ATTTGAAAAATTCATCATCACAGGGACGAAGTCACTCAGGCACTTAATAT
CCTCCTGGCGCTAAAGCGATGGATCAGAGTGCAGGTGCCCAAGATCGAGG
ATGGCAACAACTTCGGCGTTAGCGTGCAGCTGGATGTGGCGAAGTCAATC
GAACACGAGATGGCCCCGATGTCAAAGGATTTGGATGAGTTGCCGGGGTA
CTTCGAGAGCCGGGCTTCCGCGTCGGAAAAGATCGCGAAGAAGACCTCAA
AAGAGGTCAAGACATCCGGATCTTCCTCTAAAGATACAGGGGGCAAGGTG
AGCCGTTACAAACATTGTTAACGTGGACATTCTCAGTGTCACCTTCGGAC
GATTTGGTTAGTTTCGTGAGTCTTGCAGAAATACCAGGAGGGGGAATTTA
CGCATAGTTCGCAAGGATTTGATTGTTTTAGTGTGGCTCTTGTTGTGACC
CACGTCGCACTGTCCATTGTTTGTGTTCGTTTCTTGCTGTCACCTATCAC
CGATTATTGAATGCTGTGTGCACTTGGACGATAGTACAACCAGTGGAGAT
TGATAGTGTCGGAGGGTGTGTAACGGTTACAAACACCGCAAAAACTAGCC
GATAGCTTTCGTTCGAGTTGAAAATGCCGAGACTAGACGACAGGAGCACG
TACGCGCCGAGAAGATCCGTTCTTTATTCTAATATTACTGTCGTATGGCA
TGGGTGACGCGATGGTCTAGGTGACTAAGTGTTCGCCCCTGTTGGCGGAA
GTTGGGGGTTCAATTCCCGGTGGCACTTTTCTGTGCCATCTTCCGTCGCG
GAAAACGCGAGAGCGTGAGTAAACACATGTTGATGAAAGTCGACGAAGGA
AGAAAGTGCTGCACTCTTCTCGCGATACAAATGCAGGCACGTACCGTAGT
GGGAAGGCGGGGGAGGAGCGTATGACCCCGGATCTGAGTTACGAAGAGAG
TAGGCGCTAGAGAAAGAATAGGACGAAGATAATAAACGGGATGGAGAAGA
AAACAAAATGATGAAAATATTGTGTAGCTAATCATGTGACTCGTGTGGTG
TTTCTCAGCTGGACAGGGGTTTTACAGCTTCTTGTTCGTGGTGTCCGGTG
TTTGGACGTGATTTTTCGGACGATTCGCCTCGCAATAAAATGCTCGCGGG
CGCTGTATGGAATAGAGCTCTTATCATAGGACAGTTGGGTTTTGCGTTCT
TGTGGCTTAAATTAGTTAATGTGCTAAGGTCGCGTGCGCTACTGTGCTTC
CCGTGACAAACTTGTCATGGAGCAGTTGGTTGGACCGAAGGTAGGGCGTG
TCTTAAGCACGATCTCTTGTGGTCGGTCGTGGTTTCATCGACAGTTAACT
TGAGCACGACAACACTGGGGACCTACTCTCGTTTGTCCGAGAAAAAGACT
TAAAAATACTTGCCGTGAAGGGAGCTTTTCCGAAAAAGTCTGGGGCGGAG
TCTAAAATGGCAGGAACGGAAAAATGAAAAGAGCGATATCTTGTTTTTTG
TTATCTGTGGTTGTTTGGGCGTACGTTTTGGCCAAGTTAGAGTAGCATTT
GGGAGTATGGATGCTGTTGATAACATAGGGCTGTGGAGTTTGGGCGTATA
CATCCTGTTGTTCGTATATTGCTGGTAAGTACACAAGGAAATCGTCCCGG
TTACCTTTGGCGAAGATAGAGTGTCGTATTGGAGCATTTGTTTACAAGAT
ACAAAGTAGGTTTGTAGAATTTGGACGTAAATATCTTGTTATCTGTCGTT
TGAGGTCTCCGCCTCAGATGCGCGGAAATAACACCTTTGACGGAGAAAAG
TCTATACTTCGTACAACAGCAAGGAAGAGGCAAAGACAGCAGGTTTTCCG
GACAATGTGGGGCTCTATACAAGCAGCGTTGGTGTGCTGATATGCCGAGG
TTGGCGGCTACATGAACCACTCGTATTTTATGTTACGAACCAGCTTAACG
ACCCTGCTTGATACTTTTACCACCCACAGCGGCCAAACCCTCAGCCCTTG
TCGCCCGCGTAGTGGTGTGGCACTTGCCCTTGTTGATAATTATATTGGCT
ATACGAATGTCGCAGCAGCTAGTGCCCCTGTTTCTCCTACGCATGGTCGT
AGATCCCACCACAACGCTTTGCGCATCGAGCACTCACTACGCCATGTTTT
CCCGTGACGCTTTGAAACGCACGGCGACCGCCCAGCTGCTTTCCCCCGTT
CATCGATTGCAAACCCCTGATCGCCCCACGAATAGTAGCTATTACCGTGT
CAGTTATCGTGTGCAAGTGGATCCATCGTGTGCTTTCACCCATCACCGAT
ACTTACACCACACCCATCCCCTCCAAAATTGTATCCTTTATCTCGGGTAT
AATACTACGCAGGACGGTGACTCGTCGAAGACGTCGGAGTCTTCGAGCAC
AGAGGAGAAATCGGTCGAATCTTCCTCGGCACCAGAGTCCTCTCTGCACC
TCGTTGCGCTCGACGTGAGGTGGTTCGTGTCCCTTCACCACACGCTGTTG
GGTGCCAGGGACGCGGTCGTGATCGCGGGGGATATGATCGAGAAAAACAT
GGAGAAGTTGTTGCGTCCCAAGGGTACTAACACGCATGGCGGGGGCATGT
ACGCGTTTTAGGCAGTGGACGCGGTAGGAGATTGTGGGAATTTTTGGGGG
GATGTGCCACAGATTCTTGTACCGTAGTTGGCATGTTGCTATTAATAGTG
CAACAGTTTTTTGTAGGTTTTAGTATTTTTTAATGCTACACTGTTGTACA
TCAAGAGTTGCGTTAGACATCGGCGTCAAGAGTTGCGTTAGACATCAGCG
TTGTTCTTGGAGATGGACGACATTATGTGCAGGCGACAGCGGTGTCGTTG
AATTGGCAACATTGGTGAGATGGGGACCGATGAGCGCCTCGTATACAGCA
CGTGGGGAGACTTGTCGGCATATCGTTCGCACGAATCAGCACCGAAATAC
TCGAAGAGATATATGGTATCATAGGTTTTGTGATCTTTTGTTTCAAACAC
GAGTCGTGACGCCGTTATAAACTTGTTGAGGACGCACGGGATCGTTTCGT
AGATAACCTGCGATGGTACTAAATTGTGGGGCAATCTCATGTTTCGTTTG
CTTTCTACCTGCACTATTTTTTCGTTTGGATGGGACACGTGGTGAGCGTC
CAACCAATTTCATCACCCAATAAATTGTAATGGTTCTTGAGCAATTAGTC
CGATTTCGACAAATTTCGGTGCGATCGATAGATGTCAACAATATTCATGA
TTTCAACGTCTAAATTCGAATCTTGAAAAATTGTGTCGCTTTC
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Coding sequence (CDS) from alignment at D-herbacea_F_contig113:178924..184466-

>mRNA_D-herbacea_F_contig113.1006.1 ID=mRNA_D-herbacea_F_contig113.1006.1|Name=mRNA_D-herbacea_F_contig113.1006.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1470bp|location=Sequence derived from alignment at D-herbacea_F_contig113:178924..184466- (Desmarestia herbacea DmunF female)
ATGGACACGCTAACGGCAATTTCTGTGAGGGAAGGGGAGGCTGCCCTCGC
CGCCGTGCCCGGTACGGTTGGGAGGATGCAACAGCTGGTAGAGTCCAAGT
TTGCGTACACCAGCCTCAAGGACGTCGAGAGATGGACACGCTAACGGCAA
TTTCTGTGAGGGAAGGGGAGGCTGCCCTCGCCGCCGTGCCCGGTACGGTT
GGGAGGATGCAACAGCTGGTAGAGTCCAAGTTTGCGTACACCAGCCTCAA
GGACGTCGAGAGTCGTTTCACGCAGCTGCTGGCGACGTCGCGGGGAACCT
GCTCAGAGAACACAGAGATGACCGCACTTTTATCAGCAGTCAGTCGTTTC
ACGCAGCTGCTGGCGACGTCGCGGGGAACCTGCTCAGAGAACACAGAGAT
GACCGCACTTTTATCAGCAGTCAGGGACGAAGTCACTCAGGCACTTAATA
TCCTCCTGGCGCTAAAGCGATGGATCAGAGTGCAGGTGCCCAAGATCGAG
GATGGCAACAACTTCGGCGTTAGCGTGCAGCTGGATGTGGCGAAGTCAAT
CGAACACGAGATGGCCCCGATGTCAAAGGATTTGGATGAGTTGCCGGGGT
ACTTCGAGAGCCGGGCTTCCGCGTCGGAAAAGATCGCGAAGAAGACCTCA
AAAGAGGTCAAGACATCCGGATCTTCCTCTAAAGATACAGGGGGCAAGGG
ACGAAGTCACTCAGGCACTTAATATCCTCCTGGCGCTAAAGCGATGGATC
AGAGTGCAGGTGCCCAAGATCGAGGATGGCAACAACTTCGGCGTTAGCGT
GCAGCTGGATGTGGCGAAGTCAATCGAACACGAGATGGCCCCGATGTCAA
AGGATTTGGATGAGTTGCCGGGGTACTTCGAGAGCCGGGCTTCCGCGTCG
GAAAAGATCGCGAAGAAGACCTCAAAAGAGGTCAAGACATCCGGATCTTC
CTCTAAAGATACAGGGGGCAAGGACGGTGACTCGTCGAAGACGTCGGAGT
CTTCGAGCACAGAGGAGAAATCGGTCGAATCTTCCTCGGCACCAGAGTCC
TCTCTGCACCTCGTTGCGCTCGACGTGAGGTGGTTCGTGTCCCTTCACCA
CACGCTGTTGGGTGCCAGGGACGCGGTCGTGATCGCGGGGGATATGATCG
AGAAAAACATGGAGAAGTTGTTGCGTCCCAAGGGTACTAACACGCATGGC
GGGGGCATGTACGCGTTTTAGGACGGTGACTCGTCGAAGACGTCGGAGTC
TTCGAGCACAGAGGAGAAATCGGTCGAATCTTCCTCGGCACCAGAGTCCT
CTCTGCACCTCGTTGCGCTCGACGTGAGGTGGTTCGTGTCCCTTCACCAC
ACGCTGTTGGGTGCCAGGGACGCGGTCGTGATCGCGGGGGATATGATCGA
GAAAAACATGGAGAAGTTGTTGCGTCCCAAGGGTACTAACACGCATGGCG
GGGGCATGTACGCGTTTTAG
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