prot_D-herbacea_F_contig1123.993.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1123.993.1
Unique Nameprot_D-herbacea_F_contig1123.993.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length50
Homology
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BLAST of mRNA_D-herbacea_F_contig1123.993.1 vs. uniprot
Match: D8LK78_ECTSI (Ubiquinol cytochrome c reductase subunit QCR7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK78_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 5.290e-19
Identity = 41/50 (82.00%), Postives = 47/50 (94.00%), Query Frame = 0 
Query:    1 MMEENEDVAEAIRRLTPAQRLARRRRQLRAFDISLKKTPLPDHIQAVQEP 50
            M+EE+ DVAEA+RRLTP Q+LAR+RRQ RAFDISLKKTPLPDHIQAVQ+P
Sbjct:   39 MIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDP 88
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1123.993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LK78_ECTSI5.290e-1982.00Ubiquinol cytochrome c reductase subunit QCR7 n=2 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003197Cytochrome b-c1 complex subunit 7PFAMPF02271UCR_14kDcoord: 1..49
e-value: 7.0E-10
score: 38.8
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyGENE3D1.10.1090.10coord: 1..50
e-value: 3.2E-9
score: 38.6
IPR036544Cytochrome b-c1 complex subunit 7 superfamilySUPERFAMILY8152414 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 1..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1123contigD-herbacea_F_contig1123:68245..68394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1123.993.1mRNA_D-herbacea_F_contig1123.993.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1123 68224..68394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1123.993.1 ID=prot_D-herbacea_F_contig1123.993.1|Name=mRNA_D-herbacea_F_contig1123.993.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=50bp
MMEENEDVAEAIRRLTPAQRLARRRRQLRAFDISLKKTPLPDHIQAVQEP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036544QCR7_sf
IPR003197QCR7