prot_D-herbacea_F_contig112.981.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig112.981.1
Unique Nameprot_D-herbacea_F_contig112.981.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length166
Homology
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: D8LC02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC02_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 1.110e-29
Identity = 61/104 (58.65%), Postives = 79/104 (75.96%), Query Frame = 0
Query:   62 MIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGGISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQTDEELAEMTAAARQKAEEEADDGW 165
            M++  I+ G  VA+AGL  GAG+VA TE+ G R+ +RG +S + KMKM AMFMEDDVV    ++VDD+R +MR ALRA QT+EEL  +TA AR++AEEEADDGW
Sbjct:    1 MVEQDIIYGGLVAVAGLAVGAGMVALTEQAGVRSEERGALSYERKMKMQAMFMEDDVVE--ETDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW 102          
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A7R9ZNS2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZNS2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.250e-20
Identity = 59/125 (47.20%), Postives = 83/125 (66.40%), Query Frame = 0
Query:   45 RRSSVLTPQRHATSS--LKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRG-GISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQ-TDEELAEMTAAARQKAEEEADDGW 165
            R S+    Q+ A+SS  LKMIDD  +MGAG+ IAGLV G GLVAFTE+QGER  +RG G+SD+   ++S M MED V  ++ +++  +   +  AL+A   TDE+  +MT   +++  EEADDGW
Sbjct:   30 RPSAAFGIQQSASSSSQLKMIDDGYLMGAGIGIAGLVAGIGLVAFTEQQGERAKERGSGLSDNMNTQLSGMLMED-VEVSSVADIGSLTDQLEAALKASGGTDEKDLKMTEEEKKRIAEEADDGW 153          
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A6S9FQI8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FQI8_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.380e-18
Identity = 50/130 (38.46%), Postives = 81/130 (62.31%), Query Frame = 0
Query:   38 NTLALAGRRSSVLTP-QRHATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGGISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQT-DEELAEMTAAARQKAEEEADDGW 165
            ++LA + R S V +P QR +++SL M+D  ++MG  + + G  FG GL+AFTE QGERT +RGG+S+    +++   +ED V   + S++  + S +  AL+   + D +  EMT   +QK  ++ADDGW
Sbjct:   29 SSLATSSRPSVVASPTQRSSSTSLCMVDQNVIMGTAIGVGGFAFGIGLIAFTEAQGERTKERGGLSESMSTRIAGALLED-VEVDSVSDLGSLTSQLEAALKETGSKDLDNLEMTEEEKQKMIDDADDGW 157          
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A7S1ZEU0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZEU0_TRICV)

HSP 1 Score: 85.5 bits (210), Expect = 5.000e-18
Identity = 58/147 (39.46%), Postives = 89/147 (60.54%), Query Frame = 0
Query:   22 TSVSARASIPAHAT-GLNTLALAGRRSSVLTPQRHATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGG-ISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQ-TDEELAEMTAAARQKAEEEADDGW 165
            TSV+  A +P  +T G +  A+ GR     T QR +++SL M+D  ++ GA +A+ GLV G GLVAF E  GER+ +RGG +S+    K++   MED V  ++ S++  + S +  AL+     D E+ EM+   +Q+ +EEADDGW
Sbjct:   19 TSVNGYAFVPGKSTIGSSQAAVTGR-----TVQRKSSTSLSMVDQNVIQGAAIAVGGLVAGIGLVAFAEGMGERSKERGGGVSEGMATKLAGSLMED-VEVSSVSDLGSLTSQLEAALKESGGADGEVFEMSEEEKQRIKEEADDGW 159          
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A1Z5KBT4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBT4_FISSO)

HSP 1 Score: 82.0 bits (201), Expect = 6.690e-17
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 0
Query:   55 HATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGG-ISDDTKMKMSAMFMEDDVVTTANSEVDDIRS---SMRNALRAEQTDEELAEMTAAARQKAEEEADDGW 165
             +T+SL+M+D  +++GA V + GL FG GLVAFTE+QGER  +RGG +S+    +++   +ED  V    S VDD+ S    + NALR      E  E++  A++KA E+ADDGW
Sbjct:   29 RSTTSLQMVDQNVLLGAAVGVGGLAFGIGLVAFTEQQGERAKERGGGLSESMSTRIAGGLLEDVEV----SSVDDLGSLTAQLENALRQTGKTGESFEVSEEAKRKALEDADDGW 139          
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A7S2W4T6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W4T6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.140e-16
Identity = 47/114 (41.23%), Postives = 71/114 (62.28%), Query Frame = 0
Query:   56 ATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGGISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQ-TDEELA---EMTAAARQKAEEEADDGW 165
            ++SSLKM+D  ++ G  +A+A  + G GLV FTE QGER+ +RGG   DT     A  + +D+  ++ S++  + S + NAL+A    D+E A   EMT A +Q+  EEA+DGW
Sbjct:   48 SSSSLKMLDSNVIQGGAIAVASFIAGIGLVTFTENQGERSKERGGGLSDTMATQIAGKLMEDIEVSSVSDMGSLTSQLENALKASGGVDDEQAKALEMTEAEKQRIAEEAEDGW 161          
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A7S1B8H5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8H5_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.700e-14
Identity = 51/126 (40.48%), Postives = 74/126 (58.73%), Query Frame = 0
Query:   45 RRSSVLTPQRH--ATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGGISDDTKMKMSAMFMEDDVVTTA---NSEVDDIRSSMRNALRAEQTDEELAEMTAAARQKAEEEADDGW 165
            +R +  T +RH  ++SSL+M+D  I+MG  VA+A   FG GLV FTE  GER    GG+S+D   K++ M MED  V++     S  D +  ++ +A   E  D EL+E     +++ EEE DDGW
Sbjct:   37 KRLTPSTSRRHRNSSSSLQMVDTNILMGGAVAVASFAFGIGLVVFTESAGERG---GGLSEDMSTKITGMLMEDVEVSSVADVTSLTDQLAKALEDAGAIEGKDVELSE---EEKKRKEEEMDDGW 156          
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A6U0FCW0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0FCW0_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.590e-14
Identity = 47/115 (40.87%), Postives = 67/115 (58.26%), Query Frame = 0
Query:   53 QRHATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGG-ISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQTDE-ELAEMTAAARQKAEEEADDGW 165
            +R  ++SLKM+D  I+ GA + I G   G GLVAF E QGER  +RGG ISD    +++   +ED V   + S++  + S +  AL+     E +  EMT   ++K  EEADDGW
Sbjct:   65 KRSTSTSLKMVDQNIIYGAAIGIGGFAVGIGLVAFAEAQGERAKERGGGISDSMSTRIAGGLLED-VEVDSVSDLGSLTSQLEAALKETGAKEADNLEMTEEEKKKIAEEADDGW 178          
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A7S4ECZ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECZ2_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.900e-12
Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 0
Query:   45 RRSSVLTPQRHATSS-LKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGG--ISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQTDEELAEMTAAARQKAEEEA----DDGW 165
            R      P+R A+SS L+M+D  ++ G   A+ GL  G G+  F+E+Q E+  QRG   +S+ T+ KMSAMFMED+V+   ++ +DD  S M  AL A       A+  AA  +K EE+     DDGW
Sbjct:   36 RNPLATAPRRQASSSQLQMLDAAVIQGGAAAVGGLAVGLGMAWFSEQQVEQGEQRGSDAVSEATRAKMSAMFMEDEVLP--DTTLDDTVSRMEAALAA-------AKGEAAVEEKVEEKPASSIDDGW 154          
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: B7FYG2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYG2_PHATC)

HSP 1 Score: 69.7 bits (169), Expect = 4.700e-12
Identity = 40/105 (38.10%), Postives = 65/105 (61.90%), Query Frame = 0
Query:   63 IDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGG-ISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQ-TDEELAEMTAAARQKAEEEADDGW 165
            +D Q++ G G+ +AGL  G GLVAFTE QGER  +RGG +S+    +++   +ED V  ++  ++  + S +  ALR      +E+ EMT   +++ ++EADDGW
Sbjct:   46 LDQQVLQGIGIGVAGLAAGVGLVAFTEAQGERAKERGGGLSEGMSTRITGGLLED-VEVSSVEDLGSLTSQLEKALRESGGAKDEVFEMTEEEKKRIQDEADDGW 149          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LC02_ECTSI1.110e-2958.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9ZNS2_9STRA1.250e-2047.20Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A6S9FQI8_9STRA3.380e-1838.46Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1ZEU0_TRICV5.000e-1839.46Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1Z5KBT4_FISSO6.690e-1743.48Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2W4T6_9STRA1.140e-1641.23Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1B8H5_9STRA1.700e-1440.48Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A6U0FCW0_9STRA7.590e-1440.87Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4ECZ2_9STRA1.900e-1239.84Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B7FYG2_PHATC4.700e-1238.10Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..159
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 89..165
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..66
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.805
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig112contigD-herbacea_F_contig112:724189..726858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig112.981.1mRNA_D-herbacea_F_contig112.981.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig112 723369..727959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig112.981.1 ID=prot_D-herbacea_F_contig112.981.1|Name=mRNA_D-herbacea_F_contig112.981.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=166bp
MRATAALLLFSAPCASAFVATTSVSARASIPAHATGLNTLALAGRRSSVL
TPQRHATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGG
ISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQTDEELAEMT
AAARQKAEEEADDGW*
back to top