mRNA_D-herbacea_F_contig112.981.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: D8LC02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC02_ECTSI) HSP 1 Score: 115 bits (288), Expect = 3.570e-27 Identity = 61/104 (58.65%), Postives = 79/104 (75.96%), Query Frame = 1
Query: 313 MIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGGISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQTDEELAEMTAAARQKAEEEADDGW 624
M++ I+ G VA+AGL GAG+VA TE+ G R+ +RG +S + KMKM AMFMEDDVV ++VDD+R +MR ALRA QT+EEL +TA AR++AEEEADDGW
Sbjct: 1 MVEQDIIYGGLVAVAGLAVGAGMVALTEQAGVRSEERGALSYERKMKMQAMFMEDDVVE--ETDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW 102
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A7R9ZNS2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZNS2_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 6.780e-19 Identity = 59/125 (47.20%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 262 RRSSVLTPQRHATSS--LKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRG-GISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQ-TDEELAEMTAAARQKAEEEADDGW 624
R S+ Q+ A+SS LKMIDD +MGAG+ IAGLV G GLVAFTE+QGER +RG G+SD+ ++S M MED V ++ +++ + + AL+A TDE+ +MT +++ EEADDGW
Sbjct: 30 RPSAAFGIQQSASSSSQLKMIDDGYLMGAGIGIAGLVAGIGLVAFTEQQGERAKERGSGLSDNMNTQLSGMLMED-VEVSSVADIGSLTDQLEAALKASGGTDEKDLKMTEEEKKRIAEEADDGW 153
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A6S9FQI8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FQI8_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.080e-16 Identity = 50/130 (38.46%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 241 NTLALAGRRSSVLTP-QRHATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGGISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQT-DEELAEMTAAARQKAEEEADDGW 624
++LA + R S V +P QR +++SL M+D ++MG + + G FG GL+AFTE QGERT +RGG+S+ +++ +ED V + S++ + S + AL+ + D + EMT +QK ++ADDGW
Sbjct: 29 SSLATSSRPSVVASPTQRSSSTSLCMVDQNVIMGTAIGVGGFAFGIGLIAFTEAQGERTKERGGLSESMSTRIAGALLED-VEVDSVSDLGSLTSQLEAALKETGSKDLDNLEMTEEEKQKMIDDADDGW 157
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A7S1ZEU0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZEU0_TRICV) HSP 1 Score: 87.4 bits (215), Expect = 1.550e-16 Identity = 58/147 (39.46%), Postives = 89/147 (60.54%), Query Frame = 1
Query: 193 TSVSARASIPAHAT-GLNTLALAGRRSSVLTPQRHATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGG-ISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQ-TDEELAEMTAAARQKAEEEADDGW 624
TSV+ A +P +T G + A+ GR T QR +++SL M+D ++ GA +A+ GLV G GLVAF E GER+ +RGG +S+ K++ MED V ++ S++ + S + AL+ D E+ EM+ +Q+ +EEADDGW
Sbjct: 19 TSVNGYAFVPGKSTIGSSQAAVTGR-----TVQRKSSTSLSMVDQNVIQGAAIAVGGLVAGIGLVAFAEGMGERSKERGGGVSEGMATKLAGSLMED-VEVSSVSDLGSLTSQLEAALKESGGADGEVFEMSEEEKQRIKEEADDGW 159
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A1Z5KBT4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBT4_FISSO) HSP 1 Score: 84.0 bits (206), Expect = 1.500e-15 Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 292 HATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGG-ISDDTKMKMSAMFMEDDVVTTANSEVDDIRS---SMRNALRAEQTDEELAEMTAAARQKAEEEADDGW 624
+T+SL+M+D +++GA V + GL FG GLVAFTE+QGER +RGG +S+ +++ +ED V S VDD+ S + NALR E E++ A++KA E+ADDGW
Sbjct: 29 RSTTSLQMVDQNVLLGAAVGVGGLAFGIGLVAFTEQQGERAKERGGGLSESMSTRIAGGLLEDVEV----SSVDDLGSLTAQLENALRQTGKTGESFEVSEEAKRKALEDADDGW 139
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A7S2W4T6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W4T6_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.640e-15 Identity = 47/114 (41.23%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 295 ATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGGISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQ-TDEELA---EMTAAARQKAEEEADDGW 624
++SSLKM+D ++ G +A+A + G GLV FTE QGER+ +RGG DT A + +D+ ++ S++ + S + NAL+A D+E A EMT A +Q+ EEA+DGW
Sbjct: 48 SSSSLKMLDSNVIQGGAIAVASFIAGIGLVTFTENQGERSKERGGGLSDTMATQIAGKLMEDIEVSSVSDMGSLTSQLENALKASGGVDDEQAKALEMTEAEKQRIAEEAEDGW 161
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A7S1B8H5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8H5_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.270e-13 Identity = 51/126 (40.48%), Postives = 74/126 (58.73%), Query Frame = 1
Query: 262 RRSSVLTPQRH--ATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGGISDDTKMKMSAMFMEDDVVTTA---NSEVDDIRSSMRNALRAEQTDEELAEMTAAARQKAEEEADDGW 624
+R + T +RH ++SSL+M+D I+MG VA+A FG GLV FTE GER GG+S+D K++ M MED V++ S D + ++ +A E D EL+E +++ EEE DDGW
Sbjct: 37 KRLTPSTSRRHRNSSSSLQMVDTNILMGGAVAVASFAFGIGLVVFTESAGERG---GGLSEDMSTKITGMLMEDVEVSSVADVTSLTDQLAKALEDAGAIEGKDVELSEEE---KKRKEEEMDDGW 156
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A6U0FCW0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0FCW0_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.020e-12 Identity = 47/115 (40.87%), Postives = 67/115 (58.26%), Query Frame = 1
Query: 286 QRHATSSLKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGG-ISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQTDE-ELAEMTAAARQKAEEEADDGW 624
+R ++SLKM+D I+ GA + I G G GLVAF E QGER +RGG ISD +++ +ED V + S++ + S + AL+ E + EMT ++K EEADDGW
Sbjct: 65 KRSTSTSLKMVDQNIIYGAAIGIGGFAVGIGLVAFAEAQGERAKERGGGISDSMSTRIAGGLLED-VEVDSVSDLGSLTSQLEAALKETGAKEADNLEMTEEEKKKIAEEADDGW 178
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: A0A7S4ECZ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECZ2_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.730e-11 Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 1
Query: 262 RRSSVLTPQRHATSS-LKMIDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGG--ISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQTDEELAEMTAAARQKAEEEA----DDGW 624
R P+R A+SS L+M+D ++ G A+ GL G G+ F+E+Q E+ QRG +S+ T+ KMSAMFMED+V+ ++ +DD S M AL A A+ AA +K EE+ DDGW
Sbjct: 36 RNPLATAPRRQASSSQLQMLDAAVIQGGAAAVGGLAVGLGMAWFSEQQVEQGEQRGSDAVSEATRAKMSAMFMEDEVLP--DTTLDDTVSRMEAALAA-------AKGEAAVEEKVEEKPASSIDDGW 154
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Match: B7FYG2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYG2_PHATC) HSP 1 Score: 71.6 bits (174), Expect = 3.870e-11 Identity = 40/105 (38.10%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 316 IDDQIVMGAGVAIAGLVFGAGLVAFTEKQGERTAQRGG-ISDDTKMKMSAMFMEDDVVTTANSEVDDIRSSMRNALRAEQ-TDEELAEMTAAARQKAEEEADDGW 624
+D Q++ G G+ +AGL G GLVAFTE QGER +RGG +S+ +++ +ED V ++ ++ + S + ALR +E+ EMT +++ ++EADDGW
Sbjct: 46 LDQQVLQGIGIGVAGLAAGVGLVAFTEAQGERAKERGGGLSEGMSTRITGGLLED-VEVSSVEDLGSLTSQLEKALRESGGAKDEVFEMTEEEKKRIQDEADDGW 149 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig112.981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig112.981.1 >prot_D-herbacea_F_contig112.981.1 ID=prot_D-herbacea_F_contig112.981.1|Name=mRNA_D-herbacea_F_contig112.981.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=166bp MRATAALLLFSAPCASAFVATTSVSARASIPAHATGLNTLALAGRRSSVLback to top mRNA from alignment at D-herbacea_F_contig112:723369..727959+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig112.981.1 ID=mRNA_D-herbacea_F_contig112.981.1|Name=mRNA_D-herbacea_F_contig112.981.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=4591bp|location=Sequence derived from alignment at D-herbacea_F_contig112:723369..727959+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig112:723369..727959+ >mRNA_D-herbacea_F_contig112.981.1 ID=mRNA_D-herbacea_F_contig112.981.1|Name=mRNA_D-herbacea_F_contig112.981.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=996bp|location=Sequence derived from alignment at D-herbacea_F_contig112:723369..727959+ (Desmarestia herbacea DmunF female)back to top |