prot_D-herbacea_F_contig112.978.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig112.978.1
Unique Nameprot_D-herbacea_F_contig112.978.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length89
Homology
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BLAST of mRNA_D-herbacea_F_contig112.978.1 vs. uniprot
Match: D8LIX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIX5_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 3.830e-6
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0 
Query:    1 MSRPSGFTDAELAAAAWRRNMKLKGSMQEGAENGDAARRSRKEA 44
            M RPSGFTDAELAAAAWRRNMK KG+  +G E  + + ++ ++A
Sbjct:    1 MPRPSGFTDAELAAAAWRRNMKNKGANAQGIEQREQSAQTERKA 44
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig112.978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIX5_ECTSI3.830e-659.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig112contigD-herbacea_F_contig112:693821..705238 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig112.978.1mRNA_D-herbacea_F_contig112.978.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig112 693821..705496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig112.978.1 ID=prot_D-herbacea_F_contig112.978.1|Name=mRNA_D-herbacea_F_contig112.978.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=89bp
MSRPSGFTDAELAAAAWRRNMKLKGSMQEGAENGDAARRSRKEARKSARK
AKKEREKGDRRRGSTRRSRKGSRRRRDRGGTRTRSASAG
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