prot_D-herbacea_F_contig110.896.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig110.896.1
Unique Nameprot_D-herbacea_F_contig110.896.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length484
Homology
BLAST of mRNA_D-herbacea_F_contig110.896.1 vs. uniprot
Match: A0A6H5KNG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG1_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 8.980e-83
Identity = 149/361 (41.27%), Postives = 209/361 (57.89%), Query Frame = 0
Query:  149 MDTSVLMPIPSLPFWSDQNVSKLVQFTSALRDAVASMRVACDDSHPTLWTRGWEKCLERHVLRAVRSSSLKASSVKLMISDAFGQGGRLLDRGDSGPDVLQYVIRALCRGLSSATPAAVMQALQNLVVPPGTLFSTYVAELRLLLANVWCVGQVEPEDGTMQVAVKTGVDDQFAGLGAQSFSGRNLRSLPFDSVDELMGALEDVSLNQTRATESARL------------------------GGHVSRTSARAPVPAAGNKYNKVLSVEQENYNDMDSEFSKIYSIMQERGGFCKNNDDPPFYIHFNSREERDTALRSFGPYCLNCA--DPSHFARNCPESYINRSKIIHPANGEGDAETIE 483
            M T  L+ +P  P  +  +V +LVQ +SA+  +V  +R +  D     W RGWEK LERH++ +VR +  K+++ K ++  A  Q  R +D G SGPD LQ ++RA+C GLS+ TPA V+Q LQN  VP GT F  Y+ +L++L+ +V  VG  E  DGT+QVAVK GV DQ+A L A  F GRN ++LP+DS++ LM AL+D++ N T AT S RL                        GG  S   + +  P        V++V Q  Y+D   EF ++  + +   GF +N+DDPPFY+ F + +ERD A R FGP CLNC   +P H AR CP+  +N S +IHP    GD ET+E
Sbjct:    1 MATKNLITMPLTPLQNGDDVVELVQLSSAITKSVEQIRASAQDFDSDHWVRGWEKVLERHLINSVRKNHAKSAATKQILVAAVNQSVRAMDSGMSGPDALQLLLRAVCSGLSTVTPALVLQQLQNFAVPAGTTFKAYLEDLKVLVESVQMVGFAE--DGTLQVAVKAGVTDQYATLTAPVFHGRNTQALPYDSLESLMEALDDMTDNTTTATASVRLRGVGSVLPRGQADMSVSSRGRYGGGGSFSGAKSGSLTPQGSAGARAVMTVAQ--YDDESREFWQVSQVSRGNKGFGRNDDDPPFYVQFTNNKERDRARREFGPKCLNCGVEEPFHLARECPDKLMNVSGLIHPDIAVGDPETVE 357          
BLAST of mRNA_D-herbacea_F_contig110.896.1 vs. uniprot
Match: A0A6H5KZQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZQ9_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.310e-70
Identity = 141/343 (41.11%), Postives = 200/343 (58.31%), Query Frame = 0
Query:  146 YARMDTSVLMPIPSLPFWSDQNVSKLVQFTSALRDAVASMRVACDDSHPTLWTRGWEKCLERHVLRAVRSSSLKASSVKLMISDAFGQGGRLLDRGDSGPDVLQYVIRALCRGLSSATPAAVMQALQNLVVPPGTLFSTYVAELRLLLANVWCVGQVEPEDGTMQVAVKTGVDDQFAGLGAQSFSGRNLRSLPFDSVDELMGALEDVSLNQTRATESARL---GGHVSRTSARAPVPAAGNKYNKVLSVEQENYNDMDSEFSKIYSIMQERGGFCKNNDDPPFYIHFNSREERDTALRSFGPYCLNCA--DPSHFARNCPESYINRSKIIHPANGEGDAETIE 483
            +A M T  LM +P  P  +  +V +LVQ +SA+  +V  +R +  D     W RGWEK LERH+++ VR +  K+++ K ++  A  Q  R  D G SGPD L+ ++RA+C GLS+ TPA V+Q LQN  VP GT F  Y+ +L++L+ +V  VG  E  DGT+QVAVK GV DQ+A   A  F GRN ++LP+DS++ LM AL+D++ N T AT S  +   G  + R  A   V + G     V       Y D   EF ++  + +   GF +N+DDP F++  +  +ERD A R FGP   NC   +P H AR CP+  +N S +IHP    GD ET+E
Sbjct: 1049 FAVMATKNLMTMPLTPLQNGDDVVELVQLSSAITKSVEQIRASAQDFDSDHWVRGWEKVLERHLIKPVRKNHAKSAATKQILVAAVNQSVRATDSGMSGPDALKLLLRAVCSGLSTVTPALVLQQLQNFAVPAGTTFKAYLEDLKVLVESVQMVGFAE--DGTLQVAVKAGVTDQYATCTAPVFHGRNTQALPYDSLESLMEALDDMTDNTTTATASVHVRGVGSVMPRGQAGMSVSSRGRYGGGVA-----QYYDESREFWQVSQVSRGNKGFGRNDDDPNFFVQLSDNQERDRARREFGPKSRNCGVEEPFHLARECPDKLMNVSGLIHPDIAVGDPETVE 1384          
BLAST of mRNA_D-herbacea_F_contig110.896.1 vs. uniprot
Match: A0A6H5K1N6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N6_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 4.340e-54
Identity = 131/376 (34.84%), Postives = 202/376 (53.72%), Query Frame = 0
Query:  131 DHSPSPRRVCLACKAYARMDTSVLMPIPSLPFWSDQNVSKLVQFTSALRDAVASMRV-ACDDSHPTLWTRGWEKCLERHVLRAVRSSSLKASSV--KLMISDAFGQGGRLLDRGDSGPDVLQYVIRALCRGLSSATPAAVMQALQNLVVPPGTLFSTYVAELRLLLANVWCVGQVEPEDGTMQVAVKTGVDDQFAGLGAQSFSGRNLRSLPFDSVDELMGALEDVSLNQTRATESARL------------GGHVSR-TSARAPVPAAGNKYNK-------VLSVEQENYNDMDSEFSKIYSIMQERGGFCKNNDDPPFYIHFNSREERDTALRSFGPYCLNCADPSHFARNCPESYINRSKIIHPANGEGDAETIE 483
            D   S  +V    + YA   T+ LM +P L      +V++ V  +S L   V  +R+ A D+S  + W RGW+  LE+HVL +V S    A  +  K  I+ +F Q  + LD G +G + L +++R L R LS ATP  V+ ALQNL V  GT FS Y+  LR L+ N   VG    +D  +Q+AV+  V DQ++ +    F GR+L ++P+DS+ +LM ALE ++ N T AT   R             GG+ S  T++ A   +AG  Y K       V+++ +E   D + EF K++ +  +      +    PFY  F+SR+E+D A +++G  CLNC D SHF R C   +IN+S +++P  G+G  + ++
Sbjct:  446 DERLSKEQVTAIRQKYATYSTANLMRLPLLA-GQRMSVAETVSLSSTLVKNVEELRLGAGDNSKSSDWVRGWDIALEKHVLNSVSSRLPNAQGLDLKAKITSSFSQTRQQLDNGMAGREALNFLVRVLTRTLSMATPQHVVFALQNLEVDAGTPFSEYMNTLRALVQNAMSVGHESAQDNVLQLAVRDSVCDQYSNIAVDVFKGRDLMAVPYDSIRDLMDALEVLAWNTTEATAVKRNVISVQTKRAGQGGGNASAGTTSYASAASAGRMYGKQPSQGARVMNIHEE-MEDEEKEFKKVHYVATQWEKGKGDESYIPFYTRFDSRKEQDEARQAYGLKCLNCGDQSHFVRECTHPFINKSNMLNPELGQGPPQLVK 819          
BLAST of mRNA_D-herbacea_F_contig110.896.1 vs. uniprot
Match: A0A6H5JI85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI85_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 4.140e-32
Identity = 73/146 (50.00%), Postives = 97/146 (66.44%), Query Frame = 0
Query:  222 SVKLMISDAFGQGGRLLDRGDSGPDVLQYVIRALCRGLSSATPAAVMQALQNLVVPPGTLFSTYVAELRLLLANVWCVGQVEPEDGTMQVAVKTGVDDQFAGLGAQSFSGRNLRSLPFDSVDELMGALEDVSLNQTRATESARLGG 367
            S +++++ A  Q  R +D   SGPD L  V+R++C GLS  T A V+Q LQN  VP GT F  Y+ EL++L+ +V  VG  E  DGT+QVAVK GV DQFA L A  F GRN ++LP+D++D+LM ALED+  N T AT S R+ G
Sbjct:  115 SAQILVA-AITQARRAMDAETSGPDALTMVLRSVCGGLSKVTSALVLQQLQNFAVPAGTTFKAYLEELKVLVESVQLVGFAE--DGTLQVAVKAGVTDQFATLTAPVFHGRNTQALPYDNLDDLMAALEDMIENTTTATSSTRVRG 257          
BLAST of mRNA_D-herbacea_F_contig110.896.1 vs. uniprot
Match: A0A6H5KFF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFF1_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 8.030e-30
Identity = 78/164 (47.56%), Postives = 103/164 (62.80%), Query Frame = 0
Query:  223 VKLMISD--AFGQGGRLLDRGDSGPDVLQYVIRALCRGLSSATPAAVMQALQNLVVPPGTLFSTYVAELRLLLANVWCVGQVEPEDGTMQVAVKTGVDDQFAGLGAQSFSGRNLRSLPFDSVDELMGALEDVSLNQTRATESARLGGHVSRTSARAPVPAAGNK 384
            V+ +++D  A  Q  R +D   SGPD L  V+R++C GLS  T A V+Q LQN  VP  T F  Y+ EL++L+ +V  VG  E  DGT+QVAVK GV DQFA L A  F GRN ++LP+D +D+LM A ED+  N T AT S R+ G V    +R PV A+G +
Sbjct:  403 VEAVVADVAAITQARRAMDAKTSGPDALTMVLRSVCGGLSEVTSALVLQQLQNFAVPVDTTFKAYLEELKVLVESVQLVGFAE--DGTLQVAVKAGVTDQFATLTAPVFHGRNTQALPYDKLDDLMVAFEDMIENTTTATSSTRVRG-VGSAVSRGPVVASGGR 563          
BLAST of mRNA_D-herbacea_F_contig110.896.1 vs. uniprot
Match: A0A6H5JVS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS0_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.330e-26
Identity = 67/132 (50.76%), Postives = 86/132 (65.15%), Query Frame = 0
Query:  251 VIRALCRGLSSATPAAVMQALQNLVVPPGTLFSTYVAELRLLLANVWCVGQVEPEDGTMQVAVKTGVDDQFAGLGAQSFSGRNLRSLPFDSVDELMGALEDVSLNQTRATESARLGGHVSRTSARAPVPAAG 382
            V+R++C GLS  T A V+Q LQ   VP GT F  Y+ EL++L+ +V  VG  E  DGT+QVAVK GV DQFA L A  F GRN ++LP+D +D+LM ALE +  N T AT S R+ G V    +R PV A+G
Sbjct:    2 VLRSVCGGLSEVTSALVLQQLQKFAVPVGTTFKAYLEELKVLVESVQLVGFAE--DGTLQVAVKAGVTDQFATLTAPVFHGRNTQALPYDKLDDLMAALEYMIENTTTATSSTRVRG-VGSAVSRGPVVASG 130          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig110.896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KNG1_9PHAE8.980e-8341.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZQ9_9PHAE1.310e-7041.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1N6_9PHAE4.340e-5434.84CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JI85_9PHAE4.140e-3250.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFF1_9PHAE8.030e-3047.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVS0_9PHAE1.330e-2650.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 446..461
score: 8.993

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig110contigD-herbacea_F_contig110:76791..78242 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig110.896.1mRNA_D-herbacea_F_contig110.896.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig110 76791..78242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig110.896.1 ID=prot_D-herbacea_F_contig110.896.1|Name=mRNA_D-herbacea_F_contig110.896.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=484bp
EDTRVRDDFREFERLTAMFPGVPAHSLRDFQRFQQRDHHGQGSGGHDYDG
DGGQRYGGGQRYGGGGRGSGHGGNGGRDDYPRNKRWVTIDDVDAALEQAP
DEHVLVSTDQPVRVDSQGNPRVPCQVPLIRDHSPSPRRVCLACKAYARMD
TSVLMPIPSLPFWSDQNVSKLVQFTSALRDAVASMRVACDDSHPTLWTRG
WEKCLERHVLRAVRSSSLKASSVKLMISDAFGQGGRLLDRGDSGPDVLQY
VIRALCRGLSSATPAAVMQALQNLVVPPGTLFSTYVAELRLLLANVWCVG
QVEPEDGTMQVAVKTGVDDQFAGLGAQSFSGRNLRSLPFDSVDELMGALE
DVSLNQTRATESARLGGHVSRTSARAPVPAAGNKYNKVLSVEQENYNDMD
SEFSKIYSIMQERGGFCKNNDDPPFYIHFNSREERDTALRSFGPYCLNCA
DPSHFARNCPESYINRSKIIHPANGEGDAETIET
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC