prot_D-herbacea_F_contig11.886.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig11.886.1
Unique Nameprot_D-herbacea_F_contig11.886.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length425
Homology
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BLAST of mRNA_D-herbacea_F_contig11.886.1 vs. uniprot
Match: D8LE89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE89_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 5.930e-66
Identity = 189/424 (44.58%), Postives = 226/424 (53.30%), Query Frame = 0 
Query:   28 FKLAWLDEIVSEGVVRQRFLPTHAGGPPPVQHVSGLARSIVDGSPSAEPDASDETINTGAPASIQQG-------VCIPNRASSSWLQGPLRDCARDTNDDGALARSLLDAGAATDDTDGVGRSPLHWAASRGNTQVVXXXXXXXXXXXXXXXXXXXXXXXXRSSTTVEALVNRTVRVAQYRAATTCAEGQVGAAGGSERATL-----DEERLA---------------IVDARNAYGSTALHRAAFNGRESVVVALIEGGAGVGVLGKSGRSALHLACRNAHAGCVEILLAWGAEESTAANDGSTPWDELAHAAEARPMGDANVRRTARALRMARGGRAWQRRGWLLMLRVARSRLKGRLLVEEKDRDGSDAGMSEGERGRGMDGCAGGGGGERVKGGIELARLVHRLLDCGEEGFFRLVVSYI 424
              +AW ++++S+G V+QR LP H GGPP   H      SI++      PDA++E  +  +  +           V     AS +WLQ PLRDCAR+ +DDGALARSLLDAGA T+  D  GRSPLHWA +RGNT VV  XXXXXXXXXXXXXXXXXXXXXX                  Y  A       +G   G+  A+L     + E L+               IVDARN YGSTALHRAAFNGRE VV+AL+ GGA V V+G SGR                        ES  A DGSTPW +LA AAE RP G   V +TA  L  ARG RAW RRGWLLMLR   +R  G    E  D DG     S+ E G+G D                 ARLV++L+  GEEG FRLVV ++
Sbjct:    9 MNMAWFNDMISKGFVKQRHLPQHTGGPPAAGHAGSPIESILN------PDAANENRSPDSDQAXXXXXXXXXXQVQETGAASRTWLQSPLRDCARNADDDGALARSLLDAGAPTNFFDSTGRSPLHWACTRGNTAVVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XEFYGFA------PIGLPPGNVPASLVAPALEAEELSWPMAAPMPQQNGVESIVDARNVYGSTALHRAAFNGREGVVLALLRGGADVCVVGNSGRXXXXXXXXXXXXXXXXXXXXXXXXESAIAKDGSTPWSQLALAAETRPRGCPRVAKTALLLNTARGARAWARRGWLLMLRDKHNR--GVFEAEAIDLDGRGGACSDMEDGQGED----------------FARLVNQLVGIGEEGCFRLVVGFL 399
[Close]
BLAST of mRNA_D-herbacea_F_contig11.886.1 vs. uniprot
Match: D7FYG4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG4_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 4.640e-8
Identity = 46/118 (38.98%), Postives = 62/118 (52.54%), Query Frame = 0 
Query:  237 GSTALHRAAFNGRESVVVALIEGGAGVGVLGKSGRSALHLACRNAHAGCV---EILLAWGAEESTAANDGSTPWDELAHAAEARPMGDANVRRTARALRMARGGRAWQRRGWLLMLRV 351
            GST+LH AA+      ++AL++ GA        G   LHL C+   A  V   ++LL WGAEE+   NDG+TP D +          D +  R  R L  A  GRAW+RRG ++MLR 
Sbjct:  326 GSTSLHVAAYWETLDTMLALLQKGANANAPDDDGHGPLHLVCKYPKARSVAVADLLLRWGAEETATDNDGNTPADFI-------QSSDESDGRLQRLLANAPAGRAWRRRGMVIMLRA 436
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig11.886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE89_ECTSI5.930e-6644.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FYG4_ECTSI4.640e-838.98Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 285..299
score: 31.92
coord: 141..156
score: 39.16
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 140..169
e-value: 1.2E-6
score: 38.1
coord: 236..265
e-value: 0.024
score: 23.8
coord: 269..299
e-value: 0.86
score: 18.6
coord: 173..199
e-value: 2000.0
score: 2.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 140..172
score: 15.681
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 269..301
score: 10.526
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 236..268
score: 10.846
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 87..202
e-value: 1.7E-21
score: 78.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 219..376
e-value: 4.7E-21
score: 77.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 122..308
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 230..295
e-value: 8.5E-9
score: 35.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 109..306
score: 38.25
NoneNo IPR availablePFAMPF13857Ank_5coord: 127..181
e-value: 6.8E-12
score: 45.4
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 230..308
coord: 106..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig11contigD-herbacea_F_contig11:1489188..1495957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig11.886.1mRNA_D-herbacea_F_contig11.886.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig11 1489160..1497041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig11.886.1 ID=prot_D-herbacea_F_contig11.886.1|Name=mRNA_D-herbacea_F_contig11.886.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=425bp
MLSSIALQRSRQQDGSHEDPGGVADAQFKLAWLDEIVSEGVVRQRFLPTH
AGGPPPVQHVSGLARSIVDGSPSAEPDASDETINTGAPASIQQGVCIPNR
ASSSWLQGPLRDCARDTNDDGALARSLLDAGAATDDTDGVGRSPLHWAAS
RGNTQVVRALLDAGANISARDRTGKTPLHYARSSTTVEALVNRTVRVAQY
RAATTCAEGQVGAAGGSERATLDEERLAIVDARNAYGSTALHRAAFNGRE
SVVVALIEGGAGVGVLGKSGRSALHLACRNAHAGCVEILLAWGAEESTAA
NDGSTPWDELAHAAEARPMGDANVRRTARALRMARGGRAWQRRGWLLMLR
VARSRLKGRLLVEEKDRDGSDAGMSEGERGRGMDGCAGGGGGERVKGGIE
LARLVHRLLDCGEEGFFRLVVSYI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt