prot_D-herbacea_F_contig11.855.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-herbacea_F_contig11.855.1
Unique Name	prot_D-herbacea_F_contig11.855.1
Type	polypeptide
Organism	Desmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length	245

Homology

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BLAST of mRNA_D-herbacea_F_contig11.855.1 vs. uniprot
Match: A0A6H5KBT7_9PHAE (EGF-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT7_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 9.290e-64
Identity = 128/244 (52.46%), Postives = 160/244 (65.57%), Query Frame = 0

Query:    6 AGDIKILREEDVSAPKDWDKNNIGGSALRLQFFLRSGVFQDPEFVFAIRIPPVHPPSKSSGKEPSTPDVVADGD--TLEAERSAFSALLRADVGKALGVSMKSVSVEGVAPAREVSVDLWSWRQWALGSLNVSVVVKNDDPNVFGVTLFSAWNDPASRLHAGAVTGLIDFAQGAKVT--VLSESEHGVHGVVSSRPQSEDFKGPGMLATFLYIACFALAVPACGVSRRRWSRRKRASAASSGGG 245
            AGDIK+L E+D+   K        G  + +QFFLR G F+DPEFV AIR P V PPS  + +     DV+       L+ + +AFSALLR+DVG+ALGVSM  V V GV PA E  VD  +W QW  G+LNVSVVV +D P   G  L SAWN+P+SRLHAG +TGLIDF++GAKVT  VLS +     G  ++     DF GP +LATFLY+ CFALA+PACGVSRR  SRR++ ++ SS  G
Sbjct:  256 AGDIKLLLEDDIPMLKSTAAT-CNGCGVGIQFFLRPGSFRDPEFVLAIRTPRVLPPSDGNTENG---DVIPSSRIAALDEQGAAFSALLRSDVGQALGVSMNVVEVGGVTPAGETLVDWGTWEQWGTGALNVSVVVDSDAPEETGRRLLSAWNEPSSRLHAGTITGLIDFSRGAKVTAVVLSTAAFSRKGGTAAN----DFNGPTLLATFLYVMCFALAIPACGVSRRFCSRRRQGNSFSSNAG 491

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BLAST of mRNA_D-herbacea_F_contig11.855.1 vs. uniprot
Match: D8LQG6_ECTSI (Carboxypeptidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG6_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 1.180e-62
Identity = 125/241 (51.87%), Postives = 159/241 (65.98%), Query Frame = 0

Query:    7 GDIKILREEDVSAPKDWDKNNIGGSALRLQFFLRSGVFQDPEFVFAIRIPPVHPPSKSSGKEPSTPDVVADGDTLEAERSAFSALLRADVGKALGVSMKSVSVEGVAPAREVSVDLWSWRQWALGSLNVSVVVKNDDPNVFGVTLFSAWNDPASRLHAGAVTGLIDFAQGAKVT--VLSESEHGVHGVVSSRPQSEDFKGPGMLATFLYIACFALAVPACGVSRRRWSRRKRASAASSGGG 245
            GDIK+L EED+   K        G  + +QF LR G F+DPEFV AIR P V PP  ++    + P   +    L+ + SAFSALLR+DVG+ALGVSM  V V GV PA E  VD  +W QW  G+LNVSVVV +D P   G  L SAWN+P+SRLH+G +TGLIDF++GA+VT  VLS +     G  ++     DFKGP +LATFLY+ CFALA+PACG+SRR +SRR+R ++ SS  G
Sbjct:  733 GDIKLLLEEDIPMLKSTGTTKCNGCGVGIQFLLRPGSFRDPEFVLAIRTPRVLPPDGNAENGDTIPS--SSIAALDEQGSAFSALLRSDVGQALGVSMNVVEVGGVTPAGETLVDWGAWEQWGTGALNVSVVVDSDAPEETGRRLLSAWNEPSSRLHSGTITGLIDFSRGAEVTAVVLSTAAFSRKGGTAAA----DFKGPTLLATFLYVVCFALAIPACGMSRRFFSRRRRGNSFSSSAG 967

The following BLAST results are available for this feature:

BLAST of mRNA_D-herbacea_F_contig11.855.1 vs. uniprot

BLAST of mRNA_D-herbacea_F_contig11.855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KBT7_9PHAE	9.290e-64	52.46	EGF-like domain-containing protein n=1 Tax=Ectocar...	[more]
D8LQG6_ECTSI	1.180e-62	51.87	Carboxypeptidase (Partial) (Fragment) n=1 Tax=Ecto...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 206..226
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..205
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 227..245
None	No IPR available	TMHMM	TMhelix		coord: 205..227

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-herbacea_F_contig11	contig	D-herbacea_F_contig11:969698..982522 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female	2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90	2022-09-16
OGS1.0 of Desmarestia herbacea DmunF female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-herbacea_F_contig11.855.1	mRNA_D-herbacea_F_contig11.855.1	Desmarestia herbacea DmunF female	mRNA	D-herbacea_F_contig11 969698..982522 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-herbacea_F_contig11.855.1 ID=prot_D-herbacea_F_contig11.855.1|Name=mRNA_D-herbacea_F_contig11.855.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=245bp
VAAARAGDIKILREEDVSAPKDWDKNNIGGSALRLQFFLRSGVFQDPEFV
FAIRIPPVHPPSKSSGKEPSTPDVVADGDTLEAERSAFSALLRADVGKAL
GVSMKSVSVEGVAPAREVSVDLWSWRQWALGSLNVSVVVKNDDPNVFGVT
LFSAWNDPASRLHAGAVTGLIDFAQGAKVTVLSESEHGVHGVVSSRPQSE
DFKGPGMLATFLYIACFALAVPACGVSRRRWSRRKRASAASSGGG