prot_D-herbacea_F_contig109.777.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig109.777.1
Unique Nameprot_D-herbacea_F_contig109.777.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length119
Homology
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BLAST of mRNA_D-herbacea_F_contig109.777.1 vs. uniprot
Match: D7G3H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H8_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.200e-22
Identity = 57/108 (52.78%), Postives = 68/108 (62.96%), Query Frame = 0 
Query:    1 ETGGGDVWDASQAYALSVYETSRVFFSLHQENPPRENKGEPHMGAGVTVLRVRGGLGLEAVASIGNPTGETAATVGAVLTPGRYVVVPIYTGGLVVEAYEKGEARTEN 108
            E  GG +W ASQ YALSVYETSR+FFS++QEN      G      GVTVLRVR G G E VAS GNP   + +T G VL PGRYVV+P YTG +  +   +G +   N
Sbjct:  614 EEEGGMLWGASQVYALSVYETSRIFFSVYQENRSDSASGVCWRDVGVTVLRVRDGCGPEVVASTGNPAQASVST-GTVLFPGRYVVIPSYTGCVTKDQALQGNSELGN 720
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig109.777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3H8_ECTSI1.200e-2252.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036213Calpain large subunit, domain III superfamilySUPERFAMILY49758Calpain large subunit, middle domain (domain III)coord: 3..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig109contigD-herbacea_F_contig109:650509..653331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig109.777.1mRNA_D-herbacea_F_contig109.777.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig109 650509..653331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig109.777.1 ID=prot_D-herbacea_F_contig109.777.1|Name=mRNA_D-herbacea_F_contig109.777.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=119bp
ETGGGDVWDASQAYALSVYETSRVFFSLHQENPPRENKGEPHMGAGVTVL
RVRGGLGLEAVASIGNPTGETAATVGAVLTPGRYVVVPIYTGGLVVEAYE
KGEARTENGHVRSTKTKRD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036213Calpain_III_sf