prot_D-herbacea_F_contig1078.701.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1078.701.1
Unique Nameprot_D-herbacea_F_contig1078.701.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length235
Homology
BLAST of mRNA_D-herbacea_F_contig1078.701.1 vs. uniprot
Match: A0A6H5J5U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5U8_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 2.020e-83
Identity = 150/239 (62.76%), Postives = 183/239 (76.57%), Query Frame = 0
Query:    1 MLCSGQRGKTEEEIAQDTAARIAKQKSGSGGVANRETVNR---MHRQRS-VSKDEDTGLSDSVTAKKEEQEEEKLPAPTRSRMWALNKADWPWLLLGVMGAIVAGGTFPAEGVFIAHVQSNLYKTDTSEMRRVGNWWAVGFVFLGLTAMMGHLALGTGFAVAGERMTRALRTMAFKAMVRHDIAWFDKDELAVGILTTRLEAEASLVRKATGANLAHATQLVMTLVVGTVIGLVFSWQI 235
            MLC+ Q GKTEEE+  D  AR+A+QKS SG    RE       + RQ S V+   +  LS S   K  + EEEKLP P R RMW+LNK DWPWL+LGV+GAI+AGGT P+EGVFIAHVQ  +Y     EMR +GN WA+GFV LGLTA++G+  L TGFAVAGERMTR LR MAF+AMVRHDI+WFDK+  AVGILT+RLE+EAS+VR++TG+N+AH+TQL+MTL +GTVIGLVF+WQI
Sbjct:  521 MLCTSQGGKTEEEMEADKQARLARQKSLSGAKVAREASGSDALLRRQSSNVNAGHEIDLSASAGKKDAKVEEEKLPKPPRGRMWSLNKGDWPWLVLGVIGAIIAGGTAPSEGVFIAHVQVWVY-----EMRTIGNRWALGFVGLGLTALVGNFVLSTGFAVAGERMTRTLRKMAFEAMVRHDISWFDKESSAVGILTSRLESEASMVRRSTGSNVAHSTQLMMTLTIGTVIGLVFAWQI 754          
BLAST of mRNA_D-herbacea_F_contig1078.701.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 1.890e-73
Identity = 122/182 (67.03%), Postives = 150/182 (82.42%), Query Frame = 0
Query:   54 GLSDSVTAKKEEQEEEKLPAPTRSRMWALNKADWPWLLLGVMGAIVAGGTFPAEGVFIAHVQSNLYKTDTSEMRRVGNWWAVGFVFLGLTAMMGHLALGTGFAVAGERMTRALRTMAFKAMVRHDIAWFDKDELAVGILTTRLEAEASLVRKATGANLAHATQLVMTLVVGTVIGLVFSWQI 235
            G S +   K +E++EEKLPAP   RMWALNK DWPWLL+G +GA+VAGG  P+EGVF+A  QSNLY  DT +MR++GN WA+GFV LG   ++G++AL TGF V+GER+TR LR MAF+AMVRHDIAWFD++  AVG+LTTRLEAEAS+VRKATG N+AHATQL+MTL VGT+IGL F+WQI
Sbjct:  679 GSSGADKQKSKEEQEEKLPAPASGRMWALNKGDWPWLLMGFVGAVVAGGCAPSEGVFLAQGQSNLYLEDTEQMRKIGNRWALGFVGLGFLNLVGNMALSTGFTVSGERLTRTLRYMAFEAMVRHDIAWFDEESSAVGVLTTRLEAEASMVRKATGGNVAHATQLMMTLTVGTLIGLAFAWQI 860          
BLAST of mRNA_D-herbacea_F_contig1078.701.1 vs. uniprot
Match: D8LS12_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS12_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 6.070e-53
Identity = 96/173 (55.49%), Postives = 131/173 (75.72%), Query Frame = 0
Query:   63 KEEQEEEKLPAPTRSRMWALNKADWPWLLLGVMGAIVAGGTFPAEGVFIAHVQSNLYKTDTSEMRRVGNWWAVGFVFLGLTAMMGHLALGTGFAVAGERMTRALRTMAFKAMVRHDIAWFDKDELAVGILTTRLEAEASLVRKATGANLAHATQLVMTLVVGTVIGLVFSWQI 235
            K E +E K P P  SRMWALNK +  +L+LG++GA++AG  FP EGV IA++Q+NLY TD  ++R VG  W++GFV L   A++GH A+  GF+VAGER+TR LR + F+A++RHDI WFDK+E AVG LTT+LE + + V+ ATG N+A+ TQLV+TL++G VIGL  +WQI
Sbjct:  706 KGEDDEAKYPLPPSSRMWALNKPEAGYLILGLIGALMAGSLFPIEGVLIANMQNNLYATDPDKVRSVGEKWSLGFVGLAAVAIVGHCAMAYGFSVAGERLTRRLREIGFRAILRHDIGWFDKEENAVGALTTQLEEDTAKVQFATGTNVANKTQLVVTLLLGVVIGLASAWQI 878          
BLAST of mRNA_D-herbacea_F_contig1078.701.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.140e-50
Identity = 85/164 (51.83%), Postives = 115/164 (70.12%), Query Frame = 0
Query:   72 PAPTRSRMWALNKADWPWLLLGVMGAIVAGGTFPAEGVFIAHVQSNLYKTDTSEMRRVGNWWAVGFVFLGLTAMMGHLALGTGFAVAGERMTRALRTMAFKAMVRHDIAWFDKDELAVGILTTRLEAEASLVRKATGANLAHATQLVMTLVVGTVIGLVFSWQI 235
            P    SR+WALN+ DW W+++G++GA + G  FP EG+ IA++Q+  Y T+  +MRR G+ W +GFVFL + A +GHL L  GF+ +GERM R LR  AF A+VRHDI WFD +E A G+LT RLE +A+ + +ATG  L H  QL+MTL VG V+GL  +WQI
Sbjct:  626 PRAPMSRLWALNRPDWMWVVVGLVGAFITGSLFPTEGIIIANIQNTFYLTNADDMRRTGHLWTLGFVFLAIAATVGHLMLAAGFSTSGERMVRRLRETAFAAIVRHDIGWFDFEEHATGVLTGRLEEDANAMARATGMALGHKVQLIMTLCVGIVVGLAAAWQI 789          
BLAST of mRNA_D-herbacea_F_contig1078.701.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 2.910e-50
Identity = 114/239 (47.70%), Postives = 140/239 (58.58%), Query Frame = 0
Query:    1 MLCSGQRGKTEEEIAQDTAARIAKQKSGSGGVANRETVNR---MHRQRS-VSKDEDTGLSDSVTAKKEEQEEEKLPAPTRSRMWALNKADWPWLLLGVMGAIVAGGTFPAEGVFIAHVQSNLYKTDTSEMRRVGNWWAVGFVFLGLTAMMGHLALGTGFAVAGERMTRALRTMAFKAMVRHDIAWFDKDELAVGILTTRLEAEASLVRKATGANLAHATQLVMTLVVGTVIGLVFSWQI 235
            MLC+ Q GKTEEEI  D  AR+A+QKS SG    RE       + RQ S V+  ++  LS S   K  + EEEKLP P R RMW+LNK DWPWL+LGV+GAI+AGGT P+EGVFIAHVQ                                                           VRHDI+WFDK+  AVGILT+RLE+EAS+VR++TG+N+AH+TQL+MTL +GTVIGLVF+WQI
Sbjct:  593 MLCTSQGGKTEEEIEADIQARLARQKSLSGAKVTREASGSDALLRRQSSNVNPGQEIDLSASAGKKDAKVEEEKLPKPPRGRMWSLNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQ-----------------------------------------------------------VRHDISWFDKESSAVGILTSRLESEASMVRRSTGSNVAHSTQLIMTLTIGTVIGLVFAWQI 772          
BLAST of mRNA_D-herbacea_F_contig1078.701.1 vs. uniprot
Match: A0A835Z4J1_9STRA (ATP-binding cassette, sub-family B, member 1A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J1_9STRA)

HSP 1 Score: 173 bits (438), Expect = 7.900e-46
Identity = 80/164 (48.78%), Postives = 113/164 (68.90%), Query Frame = 0
Query:   72 PAPTRSRMWALNKADWPWLLLGVMGAIVAGGTFPAEGVFIAHVQSNLYKTDTSEMRRVGNWWAVGFVFLGLTAMMGHLALGTGFAVAGERMTRALRTMAFKAMVRHDIAWFDKDELAVGILTTRLEAEASLVRKATGANLAHATQLVMTLVVGTVIGLVFSWQI 235
            P    SR+WA+ + DWPW+ +G+ GA + G  FP EG+ +A +Q   Y   + E+   G  W +GFV L  + ++G+L L TGFA +GERMTR LR MAFKA++RHD+ WFD +E +  +LTT LE++AS + KATG +L H  QLVMTL++G +IGLV +WQ+
Sbjct:  770 PKAPLSRLWAMQRPDWPWVAMGIGGATLCGAMFPVEGIILAKLQEAFYLRTSEEILDQGTSWVLGFVGLAGSTLLGNLMLTTGFATSGERMTRRLRGMAFKAIIRHDVGWFDAEEHSTAVLTTNLESDASAMAKATGLDLGHKVQLVMTLLLGVLIGLVAAWQV 933          
BLAST of mRNA_D-herbacea_F_contig1078.701.1 vs. uniprot
Match: A0A836CNL1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL1_9STRA)

HSP 1 Score: 150 bits (379), Expect = 6.410e-38
Identity = 73/164 (44.51%), Postives = 108/164 (65.85%), Query Frame = 0
Query:   72 PAPTRSRMWALNKADWPWLLLGVMGAIVAGGTFPAEGVFIAHVQSNLYKTDTSEMRRVGNWWAVGFVFLGLTAMMGHLALGTGFAVAGERMTRALRTMAFKAMVRHDIAWFDKDELAVGILTTRLEAEASLVRKATGANLAHATQLVMTLVVGTVIGLVFSWQI 235
            P     R+WAL + D  W+L+G+ G+I+ G  +P +GV +A +QS+ Y    S+++  G  W + FV L  + ++GH+    GFAV+GER+TR +R MAFKA++RHDI WFD  E AVG+LTT LEA+AS + +ATG ++ H  QL+ T+ +G    L  SWQ+
Sbjct:  926 PLAPLGRIWALQRQDVGWVLMGICGSILLGAKWPVQGVILAQLQSSFYLPTASQIQDKGYDWVLAFVGLAASTVVGHVIEALGFAVSGERLTRRMREMAFKAILRHDIGWFDNAEHAVGVLTTSLEADASAMARATGMDVGHKVQLLATIGLGVGXXLGASWQV 1089          
BLAST of mRNA_D-herbacea_F_contig1078.701.1 vs. uniprot
Match: UPI0010A9879B (multidrug resistance protein 1 n=1 Tax=Antrostomus carolinensis TaxID=279965 RepID=UPI0010A9879B)

HSP 1 Score: 126 bits (317), Expect = 1.220e-29
Identity = 75/209 (35.89%), Postives = 121/209 (57.89%), Query Frame = 0
Query:   27 SGSGGVANRETVNRMHRQRSVSKDEDTGLSDSVTAKKEEQEEEKLPAPTRSRMWALNKADWPWLLLGVMGAIVAGGTFPAEGVFIAHVQSNLYKTDTSEMRRVGNWWAVGFVFLGLTAMMGHLALGTGFAVAGERMTRALRTMAFKAMVRHDIAWFDKDELAVGILTTRLEAEASLVRKATGANLAHATQLVMTLVVGTVIGLVFSWQI 235
            SG G +  R +    ++ +S SK + +G       KK+E EEE LPA   SR+ ALNK +WP++LLGV+ A ++GG  PA  V    +     +TD  +  +     ++ F+ LG+  +  ++  G  F  +GE +T+ LR+++F+A+++ +I W+D  + AVGIL TRL  +AS V+ ATG+ L   +  V TLV   +I  V+ WQ+
Sbjct:  697 SGRGSIRRRSS---RYKSKSCSKKKFSGKK-----KKKELEEENLPAVPYSRILALNKPEWPYVLLGVIAAAISGGVHPAFAVIFGKIIGAFQETDPEKRNKNTLVLSLMFLLLGVITLTAYIIQGFMFGKSGEILTKRLRSLSFRALLQQEIGWYDDQKNAVGILLTRLATDASQVKGATGSRLGLMSMTVFTLVTAIIIAFVYGWQL 897          
BLAST of mRNA_D-herbacea_F_contig1078.701.1 vs. uniprot
Match: A0A401NNP4_SCYTO (Uncharacterized protein n=6 Tax=Galeoidea TaxID=119195 RepID=A0A401NNP4_SCYTO)

HSP 1 Score: 126 bits (316), Expect = 1.590e-29
Identity = 67/168 (39.88%), Postives = 101/168 (60.12%), Query Frame = 0
Query:   67 EEEKLPAPTRSRMWALNKADWPWLLLGVMGAIVAGGTFPAEGVFIAHVQSNLYKTDTSEMRRVGNWWAVGFVFLGLTAMMGHLALGTGFAVAGERMTRALRTMAFKAMVRHDIAWFDKDELAVGILTTRLEAEASLVRKATGANLAHATQLVMTLVVGTVIGLVFSWQ 234
            EE KL + +  +++ LNK++WP++ LGV+GAIV G T PA  +  A + S   +TDT  +R+  N +++ F  +G+ + + +   G  F  AGE +T+ LR MAFKAM+R +IAWFD    + G LTTRL  EAS V+   G+ L    Q V ++    +I  +F WQ
Sbjct:  438 EEGKLKSVSFLKLFKLNKSEWPYIFLGVIGAIVNGATHPAFCIIFAKIVSIFTQTDTDVIRQQANLYSILFCVIGIVSFVTYFLQGFMFGKAGETLTQKLRYMAFKAMLRQEIAWFDDKNNSTGALTTRLATEASQVQTTVGSRLGLIAQNVASMGTAVIISFIFGWQ 605          
BLAST of mRNA_D-herbacea_F_contig1078.701.1 vs. uniprot
Match: W5LL95_ASTMX (ATP-binding cassette, sub-family B (MDR/TAP), member 5 n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=W5LL95_ASTMX)

HSP 1 Score: 125 bits (313), Expect = 4.130e-29
Identity = 66/173 (38.15%), Postives = 102/173 (58.96%), Query Frame = 0
Query:   63 KEEQEEEKLPAPTRSRMWALNKADWPWLLLGVMGAIVAGGTFPAEGVFIAHVQSNLYKTDTSEMRRVGNWWAVGFVFLGLTAMMGHLALGTGFAVAGERMTRALRTMAFKAMVRHDIAWFDKDELAVGILTTRLEAEASLVRKATGANLAHATQLVMTLVVGTVIGLVFSWQI 235
            K E+EEE +P    SR+ ALNK++WP+LL+G + + V GG +PA  +  A +     + D    R+    +++ F+ +G  A +     G  F  +GE +T  LR+ AFKA++R DI+WFD    AVG+LTT+L  +ASLV+ A G+ L  AT  +  LV+  ++    SWQ+
Sbjct:  676 KAEKEEESVPDVPFSRILALNKSEWPYLLVGTLASFVGGGVYPAVAILFAKIIGVFSEPDPEVKRQKALMFSLLFLLVGAVAFLTFFFQGYMFGKSGEILTMRLRSQAFKAILRQDISWFDDHNNAVGVLTTKLATDASLVKGAAGSRLGLATNTICALVIAMIVAFFHSWQL 848          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1078.701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J5U8_9PHAE2.020e-8362.76ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FHL1_ECTSI1.890e-7367.03ATP-binding cassette, sub-family B (MDR/TAP), memb... [more]
D8LS12_ECTSI6.070e-5355.49Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A836CGZ9_9STRA2.140e-5051.83ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
D7FHL4_ECTSI2.910e-5047.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z4J1_9STRA7.900e-4648.78ATP-binding cassette, sub-family B, member 1A n=2 ... [more]
A0A836CNL1_9STRA6.410e-3844.51P-loop containing nucleoside triphosphate hydrolas... [more]
UPI0010A9879B1.220e-2935.89multidrug resistance protein 1 n=1 Tax=Antrostomus... [more]
A0A401NNP4_SCYTO1.590e-2939.88Uncharacterized protein n=6 Tax=Galeoidea TaxID=11... [more]
W5LL95_ASTMX4.130e-2938.15ATP-binding cassette, sub-family B (MDR/TAP), memb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 90..234
e-value: 1.2E-19
score: 71.0
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 91..235
score: 16.141
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 57..235
e-value: 4.5E-43
score: 149.3
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 76..234
IPR039421Type I protein exporterPANTHERPTHR24221FAMILY NOT NAMEDcoord: 30..235
NoneNo IPR availablePANTHERPTHR24221:SF294ABC TRANSPORTER B FAMILY MEMBER 5coord: 30..235
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..210
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 234..235
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..86
NoneNo IPR availableTMHMMTMhelixcoord: 211..233
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 89..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1078contigD-herbacea_F_contig1078:29440..40564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1078.701.1mRNA_D-herbacea_F_contig1078.701.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1078 29360..40564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1078.701.1 ID=prot_D-herbacea_F_contig1078.701.1|Name=mRNA_D-herbacea_F_contig1078.701.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=235bp
MLCSGQRGKTEEEIAQDTAARIAKQKSGSGGVANRETVNRMHRQRSVSKD
EDTGLSDSVTAKKEEQEEEKLPAPTRSRMWALNKADWPWLLLGVMGAIVA
GGTFPAEGVFIAHVQSNLYKTDTSEMRRVGNWWAVGFVFLGLTAMMGHLA
LGTGFAVAGERMTRALRTMAFKAMVRHDIAWFDKDELAVGILTTRLEAEA
SLVRKATGANLAHATQLVMTLVVGTVIGLVFSWQI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039421Type_I_exporter
IPR036640ABC1_TM_sf
IPR011527ABC1_TM_dom