mRNA_D-herbacea_F_contig1072.690.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 219 bits (558), Expect = 1.780e-56 Identity = 211/738 (28.59%), Postives = 315/738 (42.68%), Query Frame = 1
Query: 133 FDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGK--PLIYY--------RNKAVLG---FPGRNRLFSNSAPIASGAALRAGASRDVMEV---HRMLAHPSEDITRKTAEIMGIETTGQWGA-CETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYARQSVREH---KMAPKGEKCVFMGIPRNFPTGTVSVLL--------VRSRNIV--ERQAVQW-----------IDGPKKTGGDGTGSDDRGMKSAGDEII-VERGTPQLNENGV------------------------------------EDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
F G C C ++GH A DC KN + KG V EV A+ + D W DSGAT HM+ + + Y + V + D + G G + D T+ + + +V Y+P L +NLLS V+ GK LI + RN +L G+ + + R +++ H + S+ I AE M G+ + CE+C K R PK T RAS + DV GPM S G + Y V F+DD +++ V F+K K + V+ Y+ +K +R+DNGGE+ + F+ L I H+ T P P+ NG AER L E A +M +P+E WA+A+ A N+S T S + +P+E F + P +L+ FG V Y + +H K+ K KC+F+G +P GT L +RSR+++ ER ++ + P K + A DE + VE+ + EN V E++ C D T DI EPRN +A ++ +W+KA ++E ++EN ++ V P DK ++G++ ++K K DG VEK+K RLVAQG+ Q EG+ Y E +SP SIR LLA+A D E+ D AFL
Sbjct: 242 FHGLCHFCHERGHFARDCPKKNPKNKKFANVVKGEQQED-----VHEVTNQEALF-TSNDDSNCGWIIDSGATQHMTSEKNRLVNYVEFKQPCKVNLGDDRTIFAFGKGTYNLVADLGNGRTQNIALKEVLYLPDLKKNLLS----VQVMGKLGALIQFDGVQCKIERNSKLLATGELHGKLYMLKIIPGVEYINVAREAPDKNLWHCRFGHLGMNGISKLINENMAEGMNCSDHGKESSLCESCVMGKQHRTPFPKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVS-YVNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA----GMPKE-FWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVH--IPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNVEQNPQPILENNVPLQENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCADD------LTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFL 950
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A8J6L9W6_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L9W6_TENMO) HSP 1 Score: 216 bits (549), Expect = 2.210e-55 Identity = 216/724 (29.83%), Postives = 329/724 (45.44%), Query Frame = 1
Query: 133 FDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKA-VLGFPGRNRLFSN-----------SAPIASGAALRAGAS-RDVMEV-HRMLAH-----PSEDITRKTAEIMGIETTGQWG------ACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGA-VGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGT---------GSDDR---------GMKSAG----------DEI----IV--ERGTPQLNENGVED----VLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
F +C+ C++ GH+A DC KN + R + K A + T V E + S+++ W DSGAT H+ + S K + PG + +A+ + G+ D G + K + + VP L NLLS K E+ G +I+ R+ A V+G G +L ++ + ++G+ AG EV HR L H SE I++ T ++G++ CE C Q K R PK+++ R S + DV GPM+ S+ Y + F+DDC+R+ VV+F++ KS+ A + Q IK +TDNGGE+ E F L IT T P P+ NG+AER L + A LM + +P WA+A+ A + N+ + S G++PYE+W GK P H R FG V + K + ++ VF+G + V + R + + V++++G +K T G D M+SA DEI +V ERG P+L G V + G ++A I E R AM S E DEW A E+ +++N +K V RP D+ VIG++++ + K G +E+ K RLVAQGF Q GVH+ E ++P +SIR+L ++AA D +R FD A+L
Sbjct: 100 FKYRCYKCKEIGHKAADC-----KNKDFRASAKSA---EDTCLSVSECHLTS-------SNKRNTWCLDSGATSHLCNDERAFSEMK-SEPG-KINLANNGSTNITAQGKAMFTADVFGES-KNISLSKTLLVPDLRTNLLSVGKITEK-GCEVIFKRDNAFVVGNDGSVKLVADRIGELYYARERNKERSTGSVFAAGLPCTKTFEVWHRRLGHLNTRDMSEAISKGT--VLGLDVLKPMNFARDSIECEVCLQGKMVRTPFPKRSD-RTSELLELIHSDVCGPMRVESMSKARYFIEFIDDCSRWTVVRFLRSKSEAIEATKGFITMVENQQGKKIKTFQTDNGGEYTSEQFDNLLKGLGITRRFTIPHNPEQNGIAERKNRTLLDMARCLMLQS----GLP-PSFWAEAVNTANYIRNRCPSKSLG-GRTPYEVWTGKKPNVSHFREFGCRVFRLDRQPNRGKFDSRAKEGVFLGYSEE--SKGYRVWMPNERKVEITRDVKFLEGTEKKAEIFTEFVPDDLFKGETDEVESPRYVGIEMRSAEEVENPEEEVQDEIEEEPVVRRERGRPRLVRTGARGRPRKVCRFQEAGTAEIEAEAFISEI-PARIAMNSPEVDEWYDAMAVEIRSIIKNNTWKLVKRPDDREVIGSRIVLRNKYNAKGTLERRKARLVAQGFSQRPGVHFKETFAPVARLSSIRLLASIAAQYDMNIRQFDVTCAYL 792
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT) HSP 1 Score: 214 bits (546), Expect = 2.970e-55 Identity = 201/712 (28.23%), Postives = 310/712 (43.54%), Query Frame = 1
Query: 130 KFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGFPGRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPSEDITRKTAEI----MGIETTGQ-----WGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPT----GTVSVLLVRSRNIVE-RQAVQWIDGPKKTGGDGTGSDDRGM---------KSAGDEIIVER------GTPQLNENGVEDVLA---------------------CDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
KF G C C++KGH A DC + + KG A + T + + + + W DSGAT HM+ R +S Y + +V + D + G G V R + V + +V Y+P L +NLLS V A+ + + + NK + N +A G ++++ H +A D R +G+ + + E C + K R PK + RAS + DV GPM SLGG+ Y V F+DD +R+ V F+K KS+ + IK + +DNGGE+ EF+ L + I H+ + P P NGVAER + E ++ ++P E WA+A+ + V N+S T + ++ +PYE F K P +LR FG + Y + K+ K K +FMG P VS +RSR+++ + D + D DD + DEI +R G Q N+ V D+ +A T DI EP N +A + EW++A ++E ++EN ++ V+ PK K V+G+K ++K K ++G V++YK RLVAQG+ Q EGV Y+E +SP +IR LLA++ AK+ E+ D + AFL
Sbjct: 232 KFQGTCHYCKEKGHFARDCPKRINNSQRDGNQSKGKGSACCAQEKSEQNNTDEEALYTSDDENRCGWIIDSGATQHMTFERNRLSNYVEFKRPCSVNLGDNRSILAYGKGTYHVKAVVNDRI-QHVALQEVLYLPELDKNLLS-VHAMVKRDATVTFKENKCEIS--------RNLKILAVGEIQGKLYVLNIVKEHVNIAKQQPDTDRYLWHCRLGHLGMNNVNKLINENMVSGEACIKGKHHRCPYPKTADYRASEPFELVHSDVCGPMSVPSLGGSRYYVSFIDDYSRYIFVYFMKNKSEVLEKFKEFHTYAMNITGKPIKVLHSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAERMNRTVVETTRSMLSHA----HIPNE-FWAEAVNTSVYVRNRSPTKALND-ITPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGEHRMRTPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSENNSLIENETWELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFL 927
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A0V1KQY5_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A0V1KQY5_9BILA) HSP 1 Score: 213 bits (542), Expect = 9.980e-55 Identity = 198/697 (28.41%), Postives = 305/697 (43.76%), Query Frame = 1
Query: 145 CFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWG-----------------KPLIYYRNKAVLGFPGRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPSEDITRKTAE---IMGIETTGQWGA-CETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGI-PRN-----FPTGTVSV----------LLVRSRNIVERQAVQWIDGPKKTGGDGTG---SDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
C+NC+KKGH +CRS +K N K + VA + R + + W +D GA H++ R S + P V I + ++ G G I+V++ G+ ++DV YVP + L ++ A G L+ Y++ + R RL N++ A L G + H+ L H S + + + + G+ T + CE C R + TE R SV G+ DV GP H S+GGN Y + F D+ + ++ V F+K K + L + + + ++ IRTD G EF E L + I HE TPP TPQ NG+AER L EKA ++ N+PR LWA+A+ A + N+ + + K+PYE WFG+ PT +HLR FG Y K PK K +F+G P N F T V L + +++ + W+ K D +DD+ K + ++ N ++ L + AM A D P +A+E ++W+++ E+ + N + P D+ I K ++K KI DG+V KYK RLVA+G+ Q + Y E ++P S+R LLA+AA +D E+ FD + AFL
Sbjct: 31 CWNCKKKGHIRSECRSQRKLNSST---------LKDRTKSLNRTGFVARSWLDVRQEPNDGWLADFGAFKHITRNRHWFSTLEFIEP-QGVRIGNDKMIYAVGIGTIDVEVFN-GKQWIASVLNDVLYVPEFGSSCLFSLGAAAARGYRIMMDNFNIRFMMNNRTELVGYKDGDLYTLLIR-RLSDNTS---MSAMLTEGETHSFELWHQRLGHISVEKIKTMMQRKLVDGLRATAEEKFFCEGCVFGSMTRKPHKEVTERRQSVPGEIIHADVCGPFIHPSVGGNRYFICFKDESSGYRKVYFMKTKDEVLRCLKTALTEIKQETGRDVQRIRTDRGTEFANRELDNFLTEKKIVHEKTPPYTPQCNGMAERENRTLAEKARAMLHTR----NLPR-CLWAEAVHTAAYLLNR-IPNRKEITKTPYEEWFGRRPTVEHLRIFGCDAYVHIPDQHRRKFDPKARKVIFVGYGPSNKMFRVFDTNKHRVDKVTDVQFNESLQKRLVLIDGEEDSWMQTADKDEDDFLEYDITDDKTEKRGPGRPPGSKNKIKVISNPLKMELRSKSTERTAMLAAAD---PLTEEEALEGANAEKWKESMLEEISALHMNDTWILTDLPADRKTIQCKWVFKSKINSDGEVSKYKARLVAKGYSQRAEIDYFETFAPVVRYESVRTLLAIAADEDLEILQFDVKTAFL 703
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A438CI20_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CI20_VITVI) HSP 1 Score: 213 bits (541), Expect = 2.670e-54 Identity = 187/684 (27.34%), Postives = 315/684 (46.05%), Query Frame = 1
Query: 130 KFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVP-EVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVL---------GFPGRNRLFSNSAPIASGAALRAGASRDVMEV----HRMLAHPSEDITRKTAEIMGIET--TGQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLRE--KAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVG-YARQSVREHKMAPKGEKCVFMGIPRN-----FPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
KF GKCFNC K+GH++ DCR KK +E ++ +T V ++ V + V S+ KE W D+GAT H+ + S ++ G V + + + G G++ + + + K + + +V YVP + +NL+S + G L++ NK VL G+ N I +A S ++E H L H + D R+ + I T CETC + K R + ++ ER + D+ + GGN Y + FVDD T++ V +K K + + + IK +R+D GGE+E F + I HE T P +PQ NGVAER L+E A+++ L + +W +A+L A + NK + K+PYELW G+ P+ +LR +G + A ++ K+ PK C+F+G N F ++ + + I+E + + + S + M + D+ P+ ++ + D ++ EP+ ++A+ S E W++A ++E+ +++N ++ V P + +K I+KRK+ DG ++KYK RLV +G+ Q+EG+ Y + YSP SIRM+LA+AA ++ E+ D + AFL
Sbjct: 275 KFQGKCFNCGKQGHKSVDCRLPKKNKPKEAN-----VIDDITKNVYDIDLTAVVSEVNLVGSNPKEWW-IDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMT----SGKELTLTNVLYVPEIRKNLVSG-SLLNNHGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLGHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSF--QSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLP-------QNMWGEAILTANYLLNKVPKKKAE--KTPYELWKGRKPSYTYLRMWGCLAKVAIPPPKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKKTIMESRNASFFEDVFPCKSKEEPSSSKRMFESQDQNEEVEVEPRRSKRVRTEKSFGPDFLTFMLEG-----EPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQIEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFL 931
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 212 bits (540), Expect = 3.500e-54 Identity = 207/702 (29.49%), Postives = 310/702 (44.16%), Query Frame = 1
Query: 142 KCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGFPGRN--------RLFSNSAPIASGAALRAGASRDVMEV-HRMLAHPSED---ITRKTAEIMGI-----ETTGQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLV----------ADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKF-PTADHLRPFGAVGYAR--QSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQA-VQWIDG--------PKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
KC C+K GH A +C KKKN +R E A LAK + + A+ R + E W DSGAT HM+ + + Y V +AD +IL G G + + + K+V + DV +VP + L S + AV + G + + + + G+ +L+ + I S G + D +++ H+ H D + K + G+ ET + CE C K R PKK+ + DV GPM S+GG+ Y V F+DD +R+ V +K KS+ A V + + +I+ +R+DNGGE+ EF R I+ E T P +PQ NGVAER L E A ++ I K WA+A+ AC V N+S T E +PYE+W K P +L+ FG Y + R+ K K C+F+G P N + T + R VE+ ++ DG P+ T D D+ + R +LN E D A A +D EP +A+ S + W+ A + E ++EN +K V P DK ++G+K ++K K G DGK+++ K RLVAQG+ Q G+ Y + ++P SIR +LA+ D EL D + AFL
Sbjct: 212 KCHYCKKTGHFAREC--YKKKNDLKR-KEGQAKLAKDEAVSDVQANSELALKSSNRIE-DENWWIDSGATQHMTPQKESIENYVAFKEPITVRLADESILYSYGKGDVHLTVKDTTEKVKIV-LKDVLFVPKIQNKLFS-LPAVTEKGYIVDFQGDSCGISIEGKRYSVGKKHGKLYKLNT-INSDQTCYIGNAMDEIDLWHQRYGHLGYDNLKLLNKKEMVNGLNFELKETVNR--NCEGCAMGKQHRQPFPKKSTNTTKGLLELIHSDVCGPMDVPSVGGSRYFVTFIDDYSRYTTVYMMKHKSEVLAKFTEFVNLVENRTGLKVKRLNVENQAIQRLRSDNGGEYTSTEFTSFCTDRGISREPTIPYSPQQNGVAERMNRTLLETARSMLHHAQKPI-----KFWAEAISTACYVRNRSPTAFLKE-TTPYEIWHRKKKPDVSNLKVFGCKSYVHVPDTKRKGKFDKKSISCIFVGYPSNENGFKFYDPQTRKMFRSRDVTFVEKDFDIEKFDGTNSNFEFFPESTEPDEP-EDNXXXXXNARPVRTRRPPERLNVLTGEWWNLID----AASIAIVDEEEPTTIEEALSSPNAELWKDAIQNEYDSLIENETWKLVEMPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFL 893
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: J9LCG1_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9LCG1_ACYPI) HSP 1 Score: 212 bits (540), Expect = 3.910e-54 Identity = 210/747 (28.11%), Postives = 335/747 (44.85%), Query Frame = 1
Query: 25 HQIQQLGNSLPSTTAANHGTVTANREK------GKNRRLHHKFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSD----RKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPL------IYYRNKAVLGFPGR-NRLFS---NSAPIASG-AALRAGASRDVMEVHRMLAHPSEDITRKTAEIMGIETTGQWGA--CETCFQVKAKRHAVPKKTEERASVR-GQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKA--IILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAM------------QATLDIP------------EPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
H +Q++ + ++GT N+EK +N+R + K GKC +C+K GH +CR K+ E +E + A+VG D EKW DSGA+ HM+ + + Y+ V I DG + G G I V + G + +V +VP L NL S +++ K + I+ +N ++G R N++FS + P+ A A + +++ H +L+H + R + M I+ T CE C V K+H P + + GQ DV GPM+ +SLGG Y VIF DD + + V F+ +KS+ + +S+ +R+D G E++ E + LD+ I HE + P TPQ NG AER++ + E A ++ + L + LWA+A+ A N++ T EGK+PYELWF K P ++L+ FG+ YA + K KG K +F+G T + + R + ++ + TG++ + +E + E +D DD QM + + L+ P +P ++AM D W+ A + EML + +N ++ V P +K I IYK K +G+V++YK RLV +G QV G+ + E +SP SIR++LA+AAA+ LR FD + AFL
Sbjct: 207 HDVQRVTAGSAFSAKKSYGT---NKEKHTKIGNSENQRNNDKKPGKCNHCKKPGHWKRECRIFLKEQKERNKSESN---------------SGNALVGVQSKDIEISESEKWYVDSGASDHMTSRKEWFTNYELFETQLPVHIGDGKYIMAIGKGNINVQA-KIGDKWVDSHLSNVLHVPDLKVNLFSCGACLDKGIKMVTDSDGCIFKKNNRIVGIGVRENKMFSMVLRTGPLQQADQANIAVKNLTLLQWHEILSHQNVQHVRNYLKHMRIQFTETKNKFFCEAC--VYGKQHREPFTLSNTKTTKPGQLIHSDVCGPMEVNSLGGKRYFVIFKDDYSNYTYVYFMSQKSEVKNKFELFLNTVKNQLNISVITLRSDCGLEYKNTEVKALLDKFGIKHETSVPYTPQQNGKAERSMRTIVEAARTMVYSKNLS-------KTLWAEAVNTAVYTINRTGNTG-QEGKTPYELWFNKTPDINNLKIFGSEVYAHIPKEKRRKWDQKGRKGIFVGYSEE--TKGYRICFDGKEVSLSRDVIFKVESVNPS----TGTEVKIRSEEEEEXVNLXXXXXXXEVNSDDEEKLDDDDQMPVAVEDQQQMILRDRGKLNKPIRYRDAFFSACNDPLTYKEAMTGNNIDNWKAAMDDEMLSLQKNETWQLVDLPINKNPINNGWIYKTKYKTNGEVDRYKARLVVKGCAQVHGIDFQETFSPVVKYDSIRVILAIAAARRLMLRQFDIKTAFL 918
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A0V1MB43_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V1MB43_9BILA) HSP 1 Score: 211 bits (538), Expect = 6.360e-54 Identity = 206/720 (28.61%), Postives = 320/720 (44.44%), Query Frame = 1
Query: 79 GTVTANREKGKNRRLHHKFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGFPGRNR--------------LFSNSAPIASGAALRAGASRDVMEV-HRMLAHPSEDITRKTAE---IMGIETTGQWGA-CETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGI-PRN-----FPTG---TVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGM--KSAGDEIIVERGT--PQLNENGVEDVLACDDGGQMAMQ---------ATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
G T ++E KN + K + +C+NC+KKGH +CRS +K N K + VA + R + + W +DSGA H++ R S + P V I + ++ G G I+V++ G+ ++DV YVP + L ++ A G +I + + F NR L S S +A+ E+ H+ L H S + + + + G+ T + CE C R + TE R SV G+ DV GP H S+GGN Y + F D+ + ++ V F+K K + L + + ++ IRTD G EF EF L + I HE +PP TPQ NG+AER L EKA ++ N+P+ LWA+A+ A + N+ + + K+PYE WFGK PT +HLR FG Y K K K +F+G P N F T V V+ ++++ V IDG ++ D+ + + D+ +RG P + N ++ + G + M+ A L +P +A+ ++WR+A E+ + N + P D+ I K I+K K G+V KYK RLVA+G+ Q + Y+E ++P S+R LLA+AA +D E+ FD + AFL
Sbjct: 203 GKRTTSKETNKNSK---KRNIECWNCKKKGHIRSECRSQRKLNSST---------LKDRTKSLNRTGFVARSWLDIRQEPNDGWLADSGAFKHITRNRHWFSTLENIEP-QGVRIGNDKMIYAVGIGTIDVEVFN-GKQWIASVLNDVLYVPEFGSSCLFSLGAAAARGYKIIM--DNFNIRFMMNNRTELVGYKDGDLYTLLIRRSLDNTSMSAMLTEGETHSFELWHQRLGHISVEKIKTMVQRNLVDGLRATAKGKFFCEGCVLGSMTRKPHKEVTERRQSVPGEILHADVCGPFIHPSVGGNCYFICFKDESSGYRKVYFMKTKFEVLRCLKIAMTEIKQETGRDMQRIRTDEGTEFVNREFDNFLTEKKIVHEKSPPYTPQCNGMAERENRTLVEKARSMLHAR----NLPKG-LWAEAVHTAAYLLNR-IPNRKETTKTPYEKWFGKRPTVEHLRIFGCDAYVHIPDQHRKKFDRKARKVIFVGYGPSNKMFRVFDTNKHRVDEVTDVKFNESLQKRLV-LIDGEEEIWMQTADKDEDNIHKEDIPDDKTEKRGPGRPPGSRNKIKVI-----GNPLKMELRSKSTERTAMLAAADPLTEEEALRGANAEKWREAMLEEITALHMNNTWILTDLPSDRKTIQCKWIFKSKTNSHGEVSKYKARLVAKGYSQRAEIDYSETFAPVVRYESVRTLLAIAADEDLEILQFDVKTAFL 894
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT) HSP 1 Score: 211 bits (538), Expect = 6.520e-54 Identity = 207/722 (28.67%), Postives = 316/722 (43.77%), Query Frame = 1
Query: 133 FDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVPEVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFG--RIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYY-------RNKAVLGFPGRNRLFSNSAPIASGAALRAGASRDVMEVHRMLAHPSEDITRKTAE---IMGIETTGQW---GACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVGYARQSVREHK-MAPKGEKCVFMGIPRNFPTGTVSVLL--------VRSRNIV--ERQAVQWIDGPK-KTGGD-----------------------GTGSDDRGMKSAGDEIIVERGTPQLNENGVEDV------------LACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
F GKC NC+++GH A DC K+N + ++ A+ + T + + W DSGAT HM+ ++ +S Y + V + D + G G RI DL G + + + DV Y+P L +NLLS V+A+ + G + + RN +L + A A ++ H H D K + + G++ CE C K R P +RA+ + DV GPM +S+GG+ Y V F+DD TR+ V F+K K + A V S+K +RTDNGGE+ EF+ L + I H+ T P P NGV+ER L E +M + + WA+A+ A + N+S TTS E +PYE F + P +LR FG +A ++ K K K VF+G +P GT L +RSR+IV E + + DG KT D G ++ ++ +E+ V+ EN + + DD +A T DI EP + ++A EW++A ++E +++N ++ V PK K ++G++ ++K K DG VE++K RLVAQG+ Q +G+ Y E +SP SIR LLA+A D E+ D + AFL
Sbjct: 227 FKGKCHNCQERGHYARDC---PKRNADSANRKESKGSARCAEKDDGDFITEDEALFTSDLLHNSGWIIDSGATQHMTFDKSNLSDYVEFKQPCIVNLGDNRSILAYGKGTYRIVADL---GDHVQNISLRDVLYLPDLEKNLLS-VRAMVKLGANVRFEGEGCEITRNSKLLAVGKMQGKLYMLKIVTVDHANIAKEDLNLKLWHYRYGHLGMDNVNKLMKGEMVQGMDCVMDGESDSVCEGCIMGKQHRTKYPSGVAKRATEPFELVHSDVCGPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTPV-----EFWAEAINTAVYLRNRSPTTSLKE-ITPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIG----YPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCSGKTCTDFYIPVDDVIPQVEIQDVPAVVIEGDHNELVDEENEREEVHVQPVGATYEENFMRETGNLGDKRQRRAPSRFDDKCYVADNLTADINEPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFL 931
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Match: A0A438F828_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438F828_VITVI) HSP 1 Score: 209 bits (532), Expect = 2.880e-53 Identity = 186/684 (27.19%), Postives = 312/684 (45.61%), Query Frame = 1
Query: 130 KFDGKCFNCRKKGHRAGDCRSAKKKNCEERGAEKGAMLAKLTVPVVP-EVRTVAAMVGEARSDRKEKWESDSGATFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVL---------GFPGRNRLFSNSAPIASGAALRAGASRDVMEV----HRMLAHPSEDITRKTAEIMGIET--TGQWGACETCFQVKAKRHAVPKKTEERASVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLVADYITPQKLSIKCIRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLRE--KAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDEGKSPYELWFGKFPTADHLRPFGAVG-YARQSVREHKMAPKGEKCVFMGIPRN-----FPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNENGVEDVLACDDGGQMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFDAEQAFL 2109
KF GKCFNC K+GH++ DCR KK +E ++ +T V ++ V + V S+ KE W D+GAT H+ + S ++ G V + + + G G++ + + + K + + +V YVP + +NL+S + G L++ NK VL G+ N I +A S ++E H L H + D R+ + I T CETC + K R + ++ ER + D+ + GGN Y + FVDD T++ V +K K + + + IK +R+D GGE+E F + I HE T P +PQ NGVAER L+E A+++ L + +W +A+L A + NK + K+PYELW G+ P+ +LR +G + A ++ K+ PK C+F+G N F ++ + I+E + + + S + M + D+ P+ ++ + D ++ EP+ ++A+ S E W++A ++E+ +++N ++ V P + +K I+KRK+ DG ++KYK RLV +G+ Q EG+ Y + YSP SIRM+LA+AA ++ E+ D + FL
Sbjct: 172 KFQGKCFNCGKQGHKSVDCRLPKKNKPKEAN-----VIDDITKNVYDIDLTAVVSEVNLVGSNPKEWW-IDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMT----SGKELTLTNVLYVPEIRKNLVSG-SLLNNHGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLGHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSF--QSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLP-------QNMWEEAILTANYLLNKVPKKKAE--KTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCKSKEEPSSSKRMLESQDQNEEVEVEPRRSKRVRTEKSFGPDFLTFMLEG-----EPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTTFL 828 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1072.690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1072.690.1 >prot_D-herbacea_F_contig1072.690.1 ID=prot_D-herbacea_F_contig1072.690.1|Name=mRNA_D-herbacea_F_contig1072.690.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=703bp NAVSQALTHQIQQLGNSLPSTTAANHGTVTANREKGKNRRLHHKFDGKCFback to top mRNA from alignment at D-herbacea_F_contig1072:50648..53997+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1072.690.1 ID=mRNA_D-herbacea_F_contig1072.690.1|Name=mRNA_D-herbacea_F_contig1072.690.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=3350bp|location=Sequence derived from alignment at D-herbacea_F_contig1072:50648..53997+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1072:50648..53997+ >mRNA_D-herbacea_F_contig1072.690.1 ID=mRNA_D-herbacea_F_contig1072.690.1|Name=mRNA_D-herbacea_F_contig1072.690.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=4218bp|location=Sequence derived from alignment at D-herbacea_F_contig1072:50648..53997+ (Desmarestia herbacea DmunF female)back to top |