prot_D-herbacea_F_contig1071.689.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1071.689.1
Unique Nameprot_D-herbacea_F_contig1071.689.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length128
Homology
BLAST of mRNA_D-herbacea_F_contig1071.689.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 2.340e-23
Identity = 52/125 (41.60%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    4 GRGAISWFSRVQKVTAAASSDSEYVAVVEVVNYARFLRQVKGFLPPPID-DIIITREDSEVAIKMAKNRFSSRRTRHVDVKHHIVRDAVESGVVRIHDVKSGEQHADVLTKALGVNTFETHARFL 127
            G GA+SWFSR QK    +++++EYVA+ EVV    FLRQ+  F+ P +    I   ED++ AI++A+N  S+  ++H+DV+HH +R+ VE   + +  V S  Q AD LTK+L  + FE+H  F+
Sbjct:   88 GGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFV 212          
BLAST of mRNA_D-herbacea_F_contig1071.689.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 6.870e-23
Identity = 50/125 (40.00%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    4 GRGAISWFSRVQKVTAAASSDSEYVAVVEVVNYARFLRQVKGFLPPPID-DIIITREDSEVAIKMAKNRFSSRRTRHVDVKHHIVRDAVESGVVRIHDVKSGEQHADVLTKALGVNTFETHARFL 127
            G G +SWFSR QK    +++++EYV++ +V+    FLRQV+ F+ P      I   ED++ AI++A+N  S+  ++H+DV+HH +R+ V    + I  V+S  QHAD LTKAL    FE H  ++
Sbjct:  126 GGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALNAGDFECHRNYV 250          
BLAST of mRNA_D-herbacea_F_contig1071.689.1 vs. uniprot
Match: A0A6H5JUW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW6_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.640e-22
Identity = 51/125 (40.80%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    4 GRGAISWFSRVQKVTAAASSDSEYVAVVEVVNYARFLRQVKGFLPPPID-DIIITREDSEVAIKMAKNRFSSRRTRHVDVKHHIVRDAVESGVVRIHDVKSGEQHADVLTKALGVNTFETHARFL 127
            G GA+SWFSR QK    +++++EYVA+ +VV    FLRQ+  F+ P +    I   ED++ AI++A+N  S+  ++H+DV+HH +R+ VE   + +  V S  Q AD LTK+L  + FE+H  F+
Sbjct:   83 GGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFV 207          
BLAST of mRNA_D-herbacea_F_contig1071.689.1 vs. uniprot
Match: A0A6H5JWJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ4_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.120e-22
Identity = 51/125 (40.80%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    4 GRGAISWFSRVQKVTAAASSDSEYVAVVEVVNYARFLRQVKGFLPPPID-DIIITREDSEVAIKMAKNRFSSRRTRHVDVKHHIVRDAVESGVVRIHDVKSGEQHADVLTKALGVNTFETHARFL 127
            G GA+SWFSR QK    +++++EYVA+ +VV    FLRQ+  F+ P +    I   ED++ AI++A+N  S+  ++H+DV+HH +R+ VE   + +  V S  Q AD LTK+L  + FE+H  F+
Sbjct:  128 GGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFV 252          
BLAST of mRNA_D-herbacea_F_contig1071.689.1 vs. uniprot
Match: A0A6H5KIJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ7_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.330e-22
Identity = 50/125 (40.00%), Postives = 81/125 (64.80%), Query Frame = 0
Query:    4 GRGAISWFSRVQKVTAAASSDSEYVAVVEVVNYARFLRQVKGFLPPPID-DIIITREDSEVAIKMAKNRFSSRRTRHVDVKHHIVRDAVESGVVRIHDVKSGEQHADVLTKALGVNTFETHARFL 127
            G G++SWFSR QK    +++++EYVA+ +VV    FLRQ+  F+ P +    I   ED++ AI++A+N  S+  ++H+DV+HH +R+ VE   + +  V S  Q AD LTK+L  ++FE+H  F+
Sbjct:   99 GGGSVSWFSRTQKCVTLSTTEAEYVALGDVVKEIIFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDSFESHREFV 223          
BLAST of mRNA_D-herbacea_F_contig1071.689.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 8.580e-22
Identity = 51/123 (41.46%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    8 ISWFSRVQKVTAAASSDSEYVAVVEVVNYARFLRQVKGFLPPPID----DIIITREDSEVAIKMAKNRFSSRRTRHVDVKHHIVRDAVESGVVRIHDVKSGEQHADVLTKALGVNTFETHARF 126
            + W SR QK  + ++S++EY+A+ + V  A F+  +  FL P +     D++   ED+E AI +A+N  SS R++H+DV+HH +R+  E GV+ +  V S EQHAD+LTKAL  + FE H  F
Sbjct:  133 VVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVL---EDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVHRDF 252          
BLAST of mRNA_D-herbacea_F_contig1071.689.1 vs. uniprot
Match: A0A6H5KAQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ4_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.280e-21
Identity = 50/121 (41.32%), Postives = 74/121 (61.16%), Query Frame = 0
Query:    4 GRGAISWFSRVQKVTAAASSDSEYVAVVEVVNYARFLRQVKGF-LPPPIDDIIITREDSEVAIKMAKNRFSSRRTRHVDVKHHIVRDAVESGVVRIHDVKSGEQHADVLTKALGVNTFETH 123
            G G ISWFSR QK    +++++EYV++ +V+    FLRQV  F LP      I   ED++ AI++A+N  S+   +H++ +HH +R+ V+   + I  V+S  QHAD LTKAL    FE H
Sbjct:   27 GGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFTLPEAGMPCIPVFEDNQEAIQLAQNPISNSNLKHIEARHHCIRELVDRKEISIFHVESAYQHADFLTKALHAGDFEFH 147          
BLAST of mRNA_D-herbacea_F_contig1071.689.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.390e-21
Identity = 53/121 (43.80%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    8 ISWFSRVQKVTAAASSDSEYVAVVEVVNYARFLRQVKGFLPPPIDDIII-TREDSEVAIKMAKNRFSSRRTRHVDVKHHIVRDAVESGVVRIHDVKSGEQHADVLTKALGVNTFETHARFL 127
            +SWFS  QK  + ++S++EY+A+ + V  A F+  +  FL P      I   ED+E AI +A+N  SS R++H+DV+HH +R+  E GV+ +  V S EQHAD+LTKAL  N FE H  F+
Sbjct:  260 VSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEFHRDFV 380          
BLAST of mRNA_D-herbacea_F_contig1071.689.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 2.900e-21
Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0
Query:    4 GRGAISWFSRVQKVTAAASSDSEYVAVVEVVNYARFLRQVKGFLPPPID-DIIITREDSEVAIKMAKNRFSSRRTRHVDVKHHIVRDAVESGVVRIHDVKSGEQHADVLTKALGVNTFETHARFL 127
            G G ISWFSR QK    +++++EYV++ +V+    FLRQV  F+ P      I   ED++ AI++A+N  S+  ++H+DV+HH +R+ V    + I  V+S  QHAD LTKAL    FE H  ++
Sbjct:  310 GGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYV 434          
BLAST of mRNA_D-herbacea_F_contig1071.689.1 vs. uniprot
Match: A0A6H5LC04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC04_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 3.750e-21
Identity = 52/125 (41.60%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    4 GRGAISWFSRVQKVTAAASSDSEYVAVVEVVNYARFLRQVKGFLPPPID-DIIITREDSEVAIKMAKNRFSSRRTRHVDVKHHIVRDAVESGVVRIHDVKSGEQHADVLTKALGVNTFETHARFL 127
            G G ISWFSR QK    +++++EYV+V +V+    FLR+V  F+ P      I   ED++ A+++A+N  S+  ++H+DV+HH +R+ V    + I  V+S  QHAD LTKAL V  FE H  F+
Sbjct: 1001 GGGCISWFSRTQKCVTLSTTEAEYVSVADVMKELLFLRKVWRFMLPEAGMPCIPVFEDNQRALQLAQNPISNSNSKHIDVRHHSIRELVGREEISIFHVESAYQHADFLTKALHVGDFEFHRNFV 1125          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1071.689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEZ8_9PHAE2.340e-2341.60Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTK6_9PHAE6.870e-2340.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUW6_9PHAE1.640e-2240.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWJ4_9PHAE2.120e-2240.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIJ7_9PHAE2.330e-2240.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCG6_9PHAE8.580e-2241.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAQ4_9PHAE1.280e-2141.32Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JRE7_9PHAE1.390e-2143.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE2.900e-2140.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5LC04_9PHAE3.750e-2141.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 5..114
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1071contigD-herbacea_F_contig1071:28565..28948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1071.689.1mRNA_D-herbacea_F_contig1071.689.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1071 28565..29305 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1071.689.1 ID=prot_D-herbacea_F_contig1071.689.1|Name=mRNA_D-herbacea_F_contig1071.689.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=128bp
MLRGRGAISWFSRVQKVTAAASSDSEYVAVVEVVNYARFLRQVKGFLPPP
IDDIIITREDSEVAIKMAKNRFSSRRTRHVDVKHHIVRDAVESGVVRIHD
VKSGEQHADVLTKALGVNTFETHARFLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like