prot_D-herbacea_F_contig107.673.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig107.673.1
Unique Nameprot_D-herbacea_F_contig107.673.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length641
Homology
BLAST of mRNA_D-herbacea_F_contig107.673.1 vs. uniprot
Match: D7FRV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV0_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.430e-14
Identity = 116/295 (39.32%), Postives = 134/295 (45.42%), Query Frame = 0
Query:    1 MPNLAFSP-GPQQP----RSSGGEKENALAADAVGNKSVVDPSAPAAAVAVPVGAPAVPPSGGV-VACKRNSSCKCPDCDMAASVFGIDQLRQVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAIGEEDVGTPGRLVGVAEAEAVRSTPD---------AKLAATTPTSAIGVSDVEGTAVV------------EQATGG-VPAAAGGGSVA--KKGWGFRMARAVFSPAAAVLTPMTKKKKDETGGIFSVIISTLAGALD 265
            MPNLAFSP GPQQP    R SG EKENA AA +    S+   +A A A +  V +P    + G  + CKR+S+CKCPDCDMAA+VF I+ LRQVGG                   XXXXXXXXX                                AA     V  P   V V ++ A    PD         AK A  T TS+    D E  A V            E A GG  PAAA   S    KKGWGFRMARAVFSP    L+P  K++ D  G   S   + LAG LD
Sbjct:    1 MPNLAFSPVGPQQPPLHDRGSG-EKENANAASSPPVGSITKKAAVAPAGSTVVRSPLESLAAGTSIVCKRDSTCKCPDCDMAAAVFDINDLRQVGGGGGIPSSPTAGGIPPPSGVXXXXXXXXXGGASRDVARDDHDGALPTWTPAPAGEGEGRQEAA-----VMPPKPAVAVVDSPAASPVPDSAARNVPHNAKKADMTATSS--APDGEHDAAVHKQPGESCGGASETAAGGETPAAASAKSAGSKKKGWGFRMARAVFSP----LSPRRKQQGDAGGDGKSGTTAALAGELD 283          
BLAST of mRNA_D-herbacea_F_contig107.673.1 vs. uniprot
Match: A0A6H5J7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K3_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 3.760e-10
Identity = 52/96 (54.17%), Postives = 62/96 (64.58%), Query Frame = 0
Query:    1 MPNLAFSP-GPQQP----RSSGGEKENALAADAVGNKSVVDPSAPAAAVAVPVGAPAVPPSGGV-VACKRNSSCKCPDCDMAASVFGIDQLRQVGG 90
            MPNLAFSP GPQ P    R SG EKENA  A +    SV   +  AAA +  V +P    + G  + CKR+S+CKCPDCDMAA+VFGI+ LRQV G
Sbjct:    1 MPNLAFSPVGPQHPPLHDRGSG-EKENAHTASSPPVGSVTKKATVAAAGSTVVRSPLESLTAGTSIVCKRDSTCKCPDCDMAAAVFGINDLRQVAG 95          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig107.673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRV0_ECTSI2.430e-1439.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7K3_9PHAE3.760e-1054.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig107contigD-herbacea_F_contig107:328209..337937 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig107.673.1mRNA_D-herbacea_F_contig107.673.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig107 311042..341568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig107.673.1 ID=prot_D-herbacea_F_contig107.673.1|Name=mRNA_D-herbacea_F_contig107.673.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=641bp
MPNLAFSPGPQQPRSSGGEKENALAADAVGNKSVVDPSAPAAAVAVPVGA
PAVPPSGGVVACKRNSSCKCPDCDMAASVFGIDQLRQVGGGGGVARSPVG
GVAPAAAVARSPPPAPVGDDDDAVGGDDDRALVPDTPVAGGGGGGGGGGV
AAIGEEDVGTPGRLVGVAEAEAVRSTPDAKLAATTPTSAIGVSDVEGTAV
VEQATGGVPAAAGGGSVAKKGWGFRMARAVFSPAAAVLTPMTKKKKDETG
GIFSVIISTLAGALDGLDLGLSPVMPLVTITEERYEMTDTTVDGAAQETS
EAVAASSVRSKLLAGLVASPKKIRENDPENDPENVQENTDDLLSGGDEEG
EVGGNGQAVVAGGTVEAPMVAVAGGVESGGAAVVIEEAVVEAGMGAMCGK
GERSTKRSAKRTSSGRRLSKDVFFECSSEVRGFIMWYPSQGPAGGNARAK
VEHVLASESESDSDNDQSEGATPVERSIAFSPTDRRKVAMVTSPSPPTPS
VMAGSSPQRPVGTNGPDPAAKAAIEAAVAAAAAVVAAGDVQASGTGAVSD
PSTSAAAGVGAPASIAVVPRDEVAGGMAVVGVGPAAAPAAGVVVEEESKR
AVGATVGAVRAVVGAGGGRRRIRREILLYKFTAFFFFFFL*
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