mRNA_D-herbacea_F_contig107.673.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig107.673.1 vs. uniprot
Match: D7FRV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV0_ECTSI) HSP 1 Score: 411 bits (1057), Expect = 1.310e-122 Identity = 425/1086 (39.13%), Postives = 527/1086 (48.53%), Query Frame = 2
Query: 263 MPNLAFSP-GPQQP----RSSGGEKENALAADAVGNKSVVDPSAPAAAVAVPVGAPAVPPSGGV-VACKRNSSCKCPDCDMAASVFGIDQLRQVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAIGEEDVGTPGRLVGVAEAEAVRSTPD---------AKLAATTPTSAIGVSDVEGTAVV------------EQATGG-VPAAAGGGSVA--KKGWGFRMARAVFSPAAAVLTPMTKKKKDETGGIFSVIISTLAGALDGLDLGLSPVMPLVTITEERYEMTDTTVDGAAQETSEAVAA-----------SSVRSKLLAGLVASPKKIRENDPXXXXXXXXXXTDDLLSGGDEEGEVGGNGQAVVAGGTVEAPMVAVAGGVESGGAAVVIEEAVVEAG------------------MGAMCGKGERSTKRSAKRTSSGRRLSKDVFFECSSEVRGFIMWYPSQGPAGGNARAKVEHVLASESXXXXXXXQSEGATPVERSIAFSPTDRRKVAMVTSPSPPTPSVMAGSSPQR-----------------------PVGTNGPDPAAKAAIEAXXXXXXXXXXXXDVQASGTGAVSD--PS------------TXXAAGVGAPASIAVVPR-------DEVAGGMAVVGVGPAAAPAAGVVXEEESKRAVGATVGAVRAVVGAGXXXXXXXXXXXXXXXXXXXXXXXL*LGLGAEAYGHEDNRSKFSQAEVNAKIRERLAEEQAAFDKTVSAMKAEHEEELKAAAERLRRSSSDGNRAKMAARDTEALEREIAMLSERFGEAAAEAMASGKALGEKEALLDAVTAQLMGLKVELKGARESFVGEKQAMLEEVDMERRNRGVAEGRLAQLAESYNRLEDTEREKRAAGILKMKKDMQALAQAQFGEANKKHNIVKARLDSAEAEVRQLREAAKGQDSRMTAAREQTEELRRQAETLRSEQANNAADAARKEQLLQEEIVAVRAEAESKMNELEAMSRERDSANNGRDVSQDALARMAIRNTELKESVSDLEGKVKELEGFCTEALDELDREK 3211
MPNLAFSP GPQQP R SG EKENA AA + S+ +A A A + V +P + G + CKR+S+CKCPDCDMAA+VF I+ LRQVGG XXXXXXXXX AA V P V V ++ A PD AK A T TS+ D E A V E A GG PAAA S KKGWGFRMARAVFSP L+P K++ D G S + LAG LD D + + E E++ T + + S AG+ A K DDLLSG + M G+ SGRRLSKD +FECSSEV EHVLAS+S + ++ E+++ T + V + S ++P PV PAA A+EA DV+ G +D PS T G APA A + E +GG A G G +E +A GA R ++G G L LG+ AEAYGHED+R+KFSQAEV+AKI+ERLAEEQ+AF+KTVS +K+ HE +L+AAA++L++SSSDGNRAK+AARD EALEREIAMLSER+GEAAAEA SGK L EKEALLDAVTAQLMGLK +L R EKQ M E D ERR R +AE RL QL +YN+LED+EREKRAAGILKMK DM+ALAQ QF ANK+H ++ARL+ +EA+ R L EAAK ++++ A +++ EL Q E L++E+ AA A+R+E +LQ+E A+R +AES+++E+EAM+RERD+AN+GRDVSQDALARMAIRNT+LKESV+DLEGKVKELEGFCTEALDELDREK
Sbjct: 1 MPNLAFSPVGPQQPPLHDRGSG-EKENANAASSPPVGSITKKAAVAPAGSTVVRSPLESLAAGTSIVCKRDSTCKCPDCDMAAAVFDINDLRQVGGGGGIPSSPTAGGIPPPSGVXXXXXXXXXGGASRDVARDDHDGALPTWTPAPAGEGEGRQEAA-----VMPPKPAVAVVDSPAASPVPDSAARNVPHNAKKADMTATSS--APDGEHDAAVHKQPGESCGGASETAAGGETPAAASAKSAGSKKKGWGFRMARAVFSP----LSPRRKQQGDAGGDGKSGTTAALAGELD--DEATAAAAGAPPLVETTVELSATAXXXXXXXXXXXXXXXXXXXXXXXXDNEIPSSAGAGMGAGGKHGNTG-----AADGNDGNDDLLSGDESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVFLGERXXXXXXXXXXXXSGRRLSKDRYFECSSEV---------------------EHVLASDSESDSGDKDVDPSSSKEQALESEQTSEQPAPPVNETNSDRISSSLAAAPXXXXXXXXXXXXXXXXXXXXXMSLLPV-VEADSPAA--ALEAAVAAAKAADVNGDVEPGGITVAADSAPSQKVLVRVAPGEETDVDVGAAAPADEATATQAATATYPPEGSGGEANAHDGKEK----GAAQDEAQSQAGGA-----RGLMGLGRRRNRRQGTQ-------------LELGM-AEAYGHEDHRAKFSQAEVDAKIKERLAEEQSAFEKTVSGLKSTHEADLQAAADKLQQSSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEAKHSGKILLEKEALLDAVTAQLMGLKSDLATTRAEHAAEKQRMTETADSERRARSLAESRLQQLEVAYNKLEDSEREKRAAGILKMKNDMKALAQQQFAGANKQHAALRARLERSEAQTRLLEEAAKEFNAKLETAGQKSTELSGQVEALQNEKVEAAASASRREHVLQQEATALRNDAESRLDEMEAMARERDAANSGRDVSQDALARMAIRNTQLKESVADLEGKVKELEGFCTEALDELDREK 1020
BLAST of mRNA_D-herbacea_F_contig107.673.1 vs. uniprot
Match: A0A6H5J7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K3_9PHAE) HSP 1 Score: 410 bits (1053), Expect = 2.910e-122 Identity = 411/1077 (38.16%), Postives = 515/1077 (47.82%), Query Frame = 2
Query: 263 MPNLAFSP-GPQQP----RSSGGEKENALAADAVGNKSVVDPSAPAAAVAVPVGAPAVPPSGGV-VACKRNSSCKCPDCDMAASVFGIDQLRQVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAIGEED---VGTPGRLVGVAEAEAVRSTPDAKLAATTPTSAIGVSDVEGTAVVEQ---ATGGVPAAAGGGSV----------AKKGWGFRMARAVFSPAAAVLTPMTKKKKDETGGIFSVIISTLAGALDGLDLGLSPVMPLVTITEERYEMTDTTVDGAAQETSEAV------AASSVRSKLLAGLVASPKKIRENDPXXXXXXXXXXTDDLLSGGDEEGEVGGNGQAVVAGGTVEAPMVAVAGGVESGGAAV-------------VIEEAVVEAGMGAMCGK-----GERSTKRSAKRTSSGRRLSKDVFFECSSEVRGFIMWYPSQGPAGGNARAKVEHVLASESXXXXXXXQSEGATPVERSI---------------------------------AFSPTDRRKVAMVTSPSPPTPSVMAGSSPQRPVGTNGPDPAAKAAIEAXXXXXXXXXXXXDVQASG--TGAVSDPSTXXA-----AGVGAPASIAVVPR-------DEVAGGMAVVGVGPAAAPAAGVVXEEESKRAVGATVGAVRAVVGAGXXXXXXXXXXXXXXXXXXXXXXXL*LGLGAEAYGHEDNRSKFSQAEVNAKIRERLAEEQAAFDKTVSAMKAEHEEELKAAAERLRRSSSDGNRAKMAARDTEALEREIAMLSERFGEAAAEAMASGKALGEKEALLDAVTAQLMGLKVELKGARESFVGEKQAMLEEVDMERRNRGVAEGRLAQLAESYNRLEDTEREKRAAGILKMKKDMQALAQAQFGEANKKHNIVKARLDSAEAEVRQLREAAKGQDSRMTAAREQTEELRRQAETLRSEQANNAADAARKEQLLQEEIVAVRAEAESKMNELEAMSRERDSANNGRDVSQDALARMAIRNTELKESVSDLEGKVKELEGFCTEALDELDREKA 3214
MPNLAFSP GPQ P R SG EKENA A + SV + AAA + V +P + G + CKR+S+CKCPDCDMAA+VFGI+ LRQV G XXX AA+ G A R P + A +D AV +Q ++GG A GG +KKGWGFRMARAVFSP + V PLV +TTV+ AA A + + S AG+ K DDLLSG + ++ A GA CG GERS +A+R SSGRRLSKD FFECSSEV ++ S+ +G V+ + E + +PV + A S T +++V + SP AA+EA DV+ G A S PS G AP A + E +GG A G + A +E +A GA R ++G G L LG+ AEAYGHED+R+KFSQAEV+AKI+ERLAEEQAAF+KTVSA+KA H+ +L+AAA++L++SSSDGNRAK+AARD EALEREIAMLSER+GEAAAEA SGK L EKEALLDAVTAQLMGLK +L R EK+ M E D ERR R +AE +L QL +YN+LED+EREKRAAGILKMK DM+ALAQ QF ANK+H ++ARL+ +EA++R L EAAK ++++ A +++ ELR Q E L+ E+A AA+A+R+E +LQ+E A+R EAES+++E+EAM+RERD+ANNGRDVSQDALARMAIRNT+LKESV+DLEGKVKELEGFCTEALDELDREKA
Sbjct: 1 MPNLAFSPVGPQHPPLHDRGSG-EKENAHTASSPPVGSVTKKATVAAAGSTVVRSPLESLTAGTSIVCKRDSTCKCPDCDMAAAVFGINDLRQVAGGGGIPSSPTASGIPPPSXXXALARSPLAGGASRDVARDDPDGALPTWTPAPAVEGEGLQEAAVMPPKPAVAGVDSPAAPPVPDSAARDVPPSVKKADVTAMPSAPADERDAAVHKQPGESSGGASETAAGGETPAAASAKSAGSKKGWGFRMARAVFSPLSPRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPLV----------ETTVEPAAXXXXXXXXXLAPPADNEIPSSAGAGMGDGGKH--------GNTGAADGNDDLLSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPRDSNDTATGGAACGGMDVFLGERSAA-AARRASSGRRLSKDRFFECSSEVE-HVLASDSESDSGDK---DVDPFSSKEQASESEQAAEQPTSPVNETNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSATPMSLLSVVEADSP------------------------AAALEAAVATAKVADVNRDVEPRGMTVAANSAPSQKGEEADVDGGAAAPGDEATATQAATATHTPERSGGEADAHDGKEKSAA----RDEAQSQAGGA-----RGLMGLGRRRNRRQGTQ-------------LELGM-AEAYGHEDHRAKFSQAEVDAKIKERLAEEQAAFEKTVSALKATHDADLQAAADKLQQSSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEAKHSGKMLLEKEALLDAVTAQLMGLKSDLATTRAEHAAEKRRMTETADSERRARSLAESKLQQLEAAYNKLEDSEREKRAAGILKMKNDMKALAQQQFAGANKQHAALRARLERSEAQIRLLEEAAKDLNAKLETAGQKSTELRGQVEALQKEKAEAAANASRREHVLQQEATALRNEAESRLDEMEAMARERDAANNGRDVSQDALARMAIRNTQLKESVADLEGKVKELEGFCTEALDELDREKA 1006 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig107.673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig107.673.1 >prot_D-herbacea_F_contig107.673.1 ID=prot_D-herbacea_F_contig107.673.1|Name=mRNA_D-herbacea_F_contig107.673.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=641bp MPNLAFSPGPQQPRSSGGEKENALAADAVGNKSVVDPSAPAAAVAVPVGAback to top mRNA from alignment at D-herbacea_F_contig107:311042..341568- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig107.673.1 ID=mRNA_D-herbacea_F_contig107.673.1|Name=mRNA_D-herbacea_F_contig107.673.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=30527bp|location=Sequence derived from alignment at D-herbacea_F_contig107:311042..341568- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig107:311042..341568- >mRNA_D-herbacea_F_contig107.673.1 ID=mRNA_D-herbacea_F_contig107.673.1|Name=mRNA_D-herbacea_F_contig107.673.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=3846bp|location=Sequence derived from alignment at D-herbacea_F_contig107:311042..341568- (Desmarestia herbacea DmunF female)back to top |