prot_D-herbacea_F_contig107.666.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig107.666.1
Unique Nameprot_D-herbacea_F_contig107.666.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length90
Homology
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BLAST of mRNA_D-herbacea_F_contig107.666.1 vs. uniprot
Match: A0A6H5L838_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L838_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.650e-21
Identity = 58/93 (62.37%), Postives = 64/93 (68.82%), Query Frame = 0 
Query:    1 MVWGSLPSRMMRSGVQAGLRCART-SARLGSRAARRRGVGSAAVKASYVPFP--AFSV-AETALPVLADLPLLQISHPLACQEPEGDEDGDGR 89
            MVWGSLP R+ R  +QAGLRCART S R G R A+R G  S A K   VP P   F V +E ALP+L DLPLL IS  LAC EPEGD+DGDGR
Sbjct:    1 MVWGSLPPRVTRVAMQAGLRCARTGSRRSGGRYAKRGGFLSTAAK---VPLPDITFDVESEPALPLLGDLPLLLISQSLACPEPEGDDDGDGR 90
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig107.666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L838_9PHAE2.650e-2162.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig107contigD-herbacea_F_contig107:166032..170172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig107.666.1mRNA_D-herbacea_F_contig107.666.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig107 165591..170196 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig107.666.1 ID=prot_D-herbacea_F_contig107.666.1|Name=mRNA_D-herbacea_F_contig107.666.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=90bp
MVWGSLPSRMMRSGVQAGLRCARTSARLGSRAARRRGVGSAAVKASYVPF
PAFSVAETALPVLADLPLLQISHPLACQEPEGDEDGDGR*
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