prot_D-herbacea_F_contig107.661.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig107.661.1
Unique Nameprot_D-herbacea_F_contig107.661.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length282
Homology
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BLAST of mRNA_D-herbacea_F_contig107.661.1 vs. uniprot
Match: D7FMQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMQ2_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 5.040e-31
Identity = 68/112 (60.71%), Postives = 85/112 (75.89%), Query Frame = 0 
Query:  179 CPSCGRPRT---------ARQGPDGIWRDEQGRRVYSEGEMREAVEQERRGWRDRTANLEASLAKMEGDAREALGRAEQAMAEMAERLRASESKTYALSVHLAKSNRPPHLA 281
            C SCG  R          AR+GPDG W D++ RR+Y+EGE+R A+EQE RGWRD+  +LEAS+A +E + + AL RAEQA+AEM E+LRA+E KTYALSVHLA+SNRPPHLA
Sbjct:  128 CSSCGAGRQQQLAGRGVGARRGPDGAWLDDEDRRLYTEGEVRHAIEQEVRGWRDKNTSLEASMANLETETKAALMRAEQAIAEMTEQLRAAEGKTYALSVHLAQSNRPPHLA 239
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BLAST of mRNA_D-herbacea_F_contig107.661.1 vs. uniprot
Match: A0A6H5JSL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL9_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 9.690e-7
Identity = 27/37 (72.97%), Postives = 34/37 (91.89%), Query Frame = 0 
Query:  245 RAEQAMAEMAERLRASESKTYALSVHLAKSNRPPHLA 281
            R ++A+AEM E+L+A+E KTYALSVHLA+SNRPPHLA
Sbjct:    5 RCQRAIAEMTEQLKAAEGKTYALSVHLAQSNRPPHLA 41
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig107.661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMQ2_ECTSI5.040e-3160.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSL9_9PHAE9.690e-772.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 232..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig107contigD-herbacea_F_contig107:16421..25797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig107.661.1mRNA_D-herbacea_F_contig107.661.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig107 15941..25804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig107.661.1 ID=prot_D-herbacea_F_contig107.661.1|Name=mRNA_D-herbacea_F_contig107.661.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=282bp
MDRSSWDSSRCGNFFPRPSPDGAAAAAPTALDRRGESRHAAAEAAAGSIP
AKATGWGGGESSAALDDAIGRFGSMTLGGGPAAGSTSSSALVEQQRHHHQ
HSAADVRQQQQRHGLPQHVGGVDGLGMGSLRVVDESASGAVVQWGGHSQQ
QQQQQQQQHQQQQQQRQQQQLLTPEAGGCPSCGRPRTARQGPDGIWRDEQ
GRRVYSEGEMREAVEQERRGWRDRTANLEASLAKMEGDAREALGRAEQAM
AEMAERLRASESKTYALSVHLAKSNRPPHLA*
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